Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01046 ATGGCTGAAAATGTGGCGTCGCCTCCGTTGAAGCTTTACTCGTCCTGGAGGAGCTCTTGTTCTCAACGTGTTCGAATTGCCCTAAACTTGAAAGGGCTAAATTTTGAGTACAAAGCCGTTAACCTACTGAAGGGAGAGCAATTCACTCCCGAGTATGAAAAACTCAATCCTATCGGTTATGTACCTACTCTCGTGGATGGGGATATCGTTATTGCCGACTCTTTTGCTATATTAATGTATTTAGAGGAGAAATATCCTCAGCATCCTCTGTTGCCAAGTGATCTGAGTAAAAGAGCTGTTAATTATCAGGCTGCAAACATTGTTTCTTCTAGCATACAGCCTCTTCAAAATCTAGTTGTTCTGAAGTACATTGAGGAAAAATCTGGTCCAGAGGAAAAACTTCATTGGGTTCAACGTGTCATTGAAAAAGGTTTTGCAGCACTTGAAAAGCTGCTAAAAGCTCATGCTGGAAAATTTGCTACTGGAGATGAAATCTTTCTGGCGGACGTGTTTTTGGCTCCTCAAATTCATGGCGCCATTAATAGATTCAGTGTTGACATGTCCAAATTTCCACTTTTATCCAGGTTGAATGAGGAATACAATGCCATAGCAGCATTTCAAGATGCAGAGCCATCAAAGCAGCCTGATGCTCCTCAAAGCTCTAGCTAA 669 41.7 MAENVASPPLKLYSSWRSSCSQRVRIALNLKGLNFEYKAVNLLKGEQFTPEYEKLNPIGYVPTLVDGDIVIADSFAILMYLEEKYPQHPLLPSDLSKRAVNYQAANIVSSSIQPLQNLVVLKYIEEKSGPEEKLHWVQRVIEKGFAALEKLLKAHAGKFATGDEIFLADVFLAPQIHGAINRFSVDMSKFPLLSRLNEEYNAIAAFQDAEPSKQPDAPQSSS 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6918361 6922485 - Cp4.1LG05g10520.1 Cpe05g01046 470251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01046 222 CDD GST_N_Zeta 10 82 IPR034333 -
Cpe05g01046 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 89 IPR004045 -
Cpe05g01046 222 PANTHER MALEYLACETOACETATE ISOMERASE 6 218 - -
Cpe05g01046 222 Gene3D Glutaredoxin 9 92 - -
Cpe05g01046 222 Pfam Glutathione S-transferase, N-terminal domain 12 88 IPR004045 -
Cpe05g01046 222 Pfam Glutathione S-transferase, C-terminal domain 123 202 IPR004046 -
Cpe05g01046 222 Gene3D - 93 220 - -
Cpe05g01046 222 SFLD Main (cytGST) 10 195 - -
Cpe05g01046 222 CDD GST_C_Zeta 97 214 IPR034330 -
Cpe05g01046 222 TIGRFAM maiA: maleylacetoacetate isomerase 11 217 IPR005955 GO:0003824|GO:0005737|GO:0009072
Cpe05g01046 222 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 6 218 - -
Cpe05g01046 222 SUPERFAMILY GST C-terminal domain-like 89 218 IPR036282 -
Cpe05g01046 222 SFLD Glutathione Transferase (cytosolic) 10 195 IPR040079 -
Cpe05g01046 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Cpe05g01046 222 SUPERFAMILY Thioredoxin-like 7 92 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01046 Cpe-Chr5:6918361 Cpe08g00486 Cpe-Chr8:3114572 2.51E-89 dispersed
Cpe05g01046 Cpe-Chr5:6918361 Cpe05g01048 Cpe-Chr5:6927048 7.99E-120 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01046 K01800 - csv:101213302 366.311