Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01048 ATGAATATGGCGGCGGGTGAAGGATATCCATTGAAGCTCTACTCGTACTACCTCAGCACTTGTGCTCAACGTGTTCGAATAGCTCTTAACTTAAAAGGGCTAAGGTTTGAGTACAAAGCTGTTGATCTTATGAAGGGAGAGCATTTGAGTCCTGACTTTCTAAAGCTCAATCCCGTTGGCTTTGTACCTGCTCTCGTGGATGGCGATATCGTCATTGCCGACTCTTTTGCAATAATAATGTATTTAGAGGAGAAGTATCCTCAACATCCTCTATTGCCGAGTGATCTTTATAAAAGAGCTATCAATTACCAGGCTGCAAATATTGTTTCTTCAAGCATACAACCTCTTCAAAACCTAATTGTTGAGAATTATATTGAGGAAAAATGTGGTGTAGAGGACAAACTTTCTTGGGTTCATATGATCATTGGAAAAGGTTTTTTAGCACTTGAGAAGTTACTAAAGGATCATGCTGGAAAATTTGCCACTGGAGACGAAATTTACCTGGCGGACTTGTTTTTGGCACCTCAACTCTACCGTGCCATAGAGACATTCAATGTTGACATGTCCAAGTTTCCACTTCTGTCAAGATTGTATGAGGAATACAAGGAGGTACCAGCATTTGAAGATGCAGCACCAGAGAAGCAGCCTGATGCTCCTTCTCAAACCTCTGCCTAA 675 41.33 MNMAAGEGYPLKLYSYYLSTCAQRVRIALNLKGLRFEYKAVDLMKGEHLSPDFLKLNPVGFVPALVDGDIVIADSFAIIMYLEEKYPQHPLLPSDLYKRAINYQAANIVSSSIQPLQNLIVENYIEEKCGVEDKLSWVHMIIGKGFLALEKLLKDHAGKFATGDEIYLADLFLAPQLYRAIETFNVDMSKFPLLSRLYEEYKEVPAFEDAAPEKQPDAPSQTSA 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6927048 6931598 - Cp4.1LG05g10530.1 Cpe05g01048 470253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01048 224 PANTHER S-CRYSTALLIN-RELATED 10 220 - -
Cpe05g01048 224 Gene3D Glutaredoxin 10 93 - -
Cpe05g01048 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 95 220 IPR010987 -
Cpe05g01048 224 TIGRFAM maiA: maleylacetoacetate isomerase 12 218 IPR005955 GO:0003824|GO:0005737|GO:0009072
Cpe05g01048 224 CDD GST_C_Zeta 96 215 IPR034330 -
Cpe05g01048 224 SFLD Glutathione Transferase (cytosolic) 11 202 IPR040079 -
Cpe05g01048 224 SUPERFAMILY GST C-terminal domain-like 90 219 IPR036282 -
Cpe05g01048 224 SUPERFAMILY Thioredoxin-like 9 93 IPR036249 -
Cpe05g01048 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 9 90 IPR004045 -
Cpe05g01048 224 PANTHER MALEYLACETOACETATE ISOMERASE 10 220 - -
Cpe05g01048 224 Gene3D - 94 221 - -
Cpe05g01048 224 SFLD Main (cytGST) 11 202 - -
Cpe05g01048 224 CDD GST_N_Zeta 11 83 IPR034333 -
Cpe05g01048 224 Pfam Glutathione S-transferase, N-terminal domain 13 89 IPR004045 -
Cpe05g01048 224 Pfam Glutathione S-transferase, C-terminal domain 134 206 IPR004046 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00710 Cpe-Chr3:4288149 Cpe05g01048 Cpe-Chr5:6927048 2.84E-06 dispersed
Cpe05g01048 Cpe-Chr5:6927048 Cpe08g00486 Cpe-Chr8:3114572 1.29E-82 dispersed
Cpe17g00797 Cpe-Chr17:6242852 Cpe05g01048 Cpe-Chr5:6927048 5.09E-10 dispersed
Cpe05g01046 Cpe-Chr5:6918361 Cpe05g01048 Cpe-Chr5:6927048 7.99E-120 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01048 K01800 - csv:116401624 370.933