Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01060 ATGGATGAGAATTCCTCAATCTTCAATAGCACAGAGGATAAAATCGTCTGCTATGCGCCAAGAATGATCACAACAAATGGGGTGTGGCAAGGCGACAACCCTTTGGAGTATTCTCTCCCTCTCTTCATCCTGCAGTTAACAATGGTGGTTATGATGACTCGCGCTTTGGTTTTCCTCTTAAAACCCTTTCGTCAACCTCGAGTCATCTCTGAAATTTTGGGTGGAGTGATTTTGGGGCCTTCAGTACTGGGGAGGAGTGATCAATTTTCCAACGCTTTATTTCCTTTAAGAAGTGTAATGGTGCTTGAAGCAATGGCAAACGTGGGGCTTCTCTACTTTCTGTTCTTGATTGGTGTGGAGATGGAACTCTCAGTGATTCGTCGATCTGGTAGGAAGGCAATGGCAATAGCTGCAGCAGGAATGGTTCTTCCATTCGGAATAGGAGCTGCTTTTTCATTCCAGCTGCACAAAGCAGATCAGAAACTGAACTACAGCACTTATATCATGTTTCTTGGTATTGCACTCTCTGTGACTGCTTTCCCAGTGCTTGCTAGAATTCTCGCAGAGCTTAAATTGATAAACTCAGAGCTTGGAAGGATGGCTATGGCTTCTGCCCTTTTCAATGATATGTGCGCTTGGGTTCTCTTAGCTTTAGCCCTAGCCTTGTCTGAGAACGATTCCTCATCTCTGGCTTCTCTATGGGTTGTACTATCGAGTACAGGCTTTGTCTTGTTCTGTATCTTCATAATTAGACCGATTATCACATGGATGATTCGAAAAACCCCAGAAGGAGAAAGTATGAGTGAGTTCAGTATTTGTTTGATCCTCACAGGGGTTATGATCTCAGGGTTTATCACAGATGCCATAGGAACACACTCAGTTTTTGGAGCTTTTGTGTTTGGGTTGGTCATCCCAAATGGATCACTTGGAGTGGCTTTGATTGAGAAACTTGAGGATTTTGTTTCAGGGCTTTTGCTCCCTCTCTTCTTTGCAATAAGTGGGCTCAAGACTAACGTGAGTAGCATAGAGGGATTAATGACTTGGGTATCTATTCTGTTCATCACTGTCCTTGCTTTCATTGGCAAGGTCATTGGAACTCTCCTTGCCTCCGTTTGTTATCAGATGTCCTATCGCGAAGGTGTCACATTAGGCTTGCTTATGAACACCAAAGGCCTTGTTGAAATGATCATCCTCAACGTCGGAAAGGACCAACAGATATTAGATGATCAAACATTCACAGTAATGGTGATTGTAGCCCTCATTATGACAGGGATAATAACACCTGTAGTTACCATACTCTATAGGCCAACAAGAAGGCTTCTACCGTATAAGAAACGAACAATCCAAGCTTCAAAGCCAGATTCGGAGTTCAGAGTATTGGTTTGCATCCACACACCTCGAAATGTGCCGACAATCATCAACCTCCTGGATGCTTCCAACCCAACCAAAAGGTCCCCAATTTGCATTTATGTGCTACACTTGGTCGAACTCACAGGCCGAGCATCCGCCATGCTCATTGTCCACAACACCAGAAAATCAGGTCGCCCTGCCGTAAATCGAACCCAAGCTCATTCAGAACATATCATCAGTGCATTCGAGAACTATGAACAACACATCGATTGCGTCTCTGTTCAGCCTCTAACAGCTATTTCCCCTTACTCCACAATGCACGAAGACATCTGCTATTTAGCCGAGGACAAACGCGTCGCCTTCATAATCATCCCATTCCACAAGCAACAAACAGTGGATGGAGGAATGGAATCCACAAATCCAGCACTTAGATTGGTTAACCAAAATGTGTTAGTCAGTGCCCCTTGCTCCGTCGGAATCTTAGTCGATCGAGGCCTAAGTGGCTCGAATCAAAGCGGATCGAACAAAGCGTCTCATTACAACATAATCGTGTTGTTCTTCGGTGGACAAGACGACAGAGAAGCTCTAGCATACGCATGGAGAATGTCAGAAAATCCAAGAGTGACCTTAACCGTAATGCGATTCATCGCCGCAGAACAAGTAATAGCAGCAAAACAAGAAGCAAATGCACAAGGAGTTTCAGCAATGCAAATAGATACGGACAATGAGAGGCAGCTGGATGAAGAATACATAAATGAATTCATGATAAGTAATGAAGAAAACGATTCAATTACATACACACAGAGAATCTTGAACAACGGCGAGGAGACAGTGGCGGCCATAAGATCAATGGACGGTGCTCACGACCTGTTCATCGTTGGCAGAGGAGAAGCTCAAGCATCGCCACTCATCGCTGGACTCACAGACTGGAGCGAATGTCCAGAGCTTGGAGTAATCGGCGATTTGCTAGCTTCGTCCGATTTAGCAGCGACGGCTTCAGTTTTGGTAGTGGAACAGTTCGGAGTAGCCATGGTGGCGGAGCATGGAGAAGCAGAAAGGTCACCGCATCGCCACGATCAAGGCGACCACTACCAAAACTTGAGATCCACGAATGCGAGGCAACATATTCCATCAAGATCTCATATTATATACAATGGATAG 2511 44.92 MDENSSIFNSTEDKIVCYAPRMITTNGVWQGDNPLEYSLPLFILQLTMVVMMTRALVFLLKPFRQPRVISEILGGVILGPSVLGRSDQFSNALFPLRSVMVLEAMANVGLLYFLFLIGVEMELSVIRRSGRKAMAIAAAGMVLPFGIGAAFSFQLHKADQKLNYSTYIMFLGIALSVTAFPVLARILAELKLINSELGRMAMASALFNDMCAWVLLALALALSENDSSSLASLWVVLSSTGFVLFCIFIIRPIITWMIRKTPEGESMSEFSICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNGSLGVALIEKLEDFVSGLLLPLFFAISGLKTNVSSIEGLMTWVSILFITVLAFIGKVIGTLLASVCYQMSYREGVTLGLLMNTKGLVEMIILNVGKDQQILDDQTFTVMVIVALIMTGIITPVVTILYRPTRRLLPYKKRTIQASKPDSEFRVLVCIHTPRNVPTIINLLDASNPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPAVNRTQAHSEHIISAFENYEQHIDCVSVQPLTAISPYSTMHEDICYLAEDKRVAFIIIPFHKQQTVDGGMESTNPALRLVNQNVLVSAPCSVGILVDRGLSGSNQSGSNKASHYNIIVLFFGGQDDREALAYAWRMSENPRVTLTVMRFIAAEQVIAAKQEANAQGVSAMQIDTDNERQLDEEYINEFMISNEENDSITYTQRILNNGEETVAAIRSMDGAHDLFIVGRGEAQASPLIAGLTDWSECPELGVIGDLLASSDLAATASVLVVEQFGVAMVAEHGEAERSPHRHDQGDHYQNLRSTNARQHIPSRSHIIYNG 836
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7011636 7015009 + Cp4.1LG05g10580.1 Cpe05g01060 470265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01060 836 Gene3D - 41 440 IPR038770 -
Cpe05g01060 836 MobiDBLite consensus disorder prediction 799 814 - -
Cpe05g01060 836 MobiDBLite consensus disorder prediction 798 821 - -
Cpe05g01060 836 Pfam Sodium/hydrogen exchanger family 49 432 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe05g01060 836 PANTHER BNAA09G08340D PROTEIN 12 807 - -
Cpe05g01060 836 PANTHER CATION/H + ANTIPORTER 12 807 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00640 Cpe-Chr1:3695270 Cpe05g01060 Cpe-Chr5:7011636 6.43E-29 dispersed
Cpe01g01007 Cpe-Chr1:5968139 Cpe05g01060 Cpe-Chr5:7011636 3.34E-172 dispersed
Cpe02g01139 Cpe-Chr2:10379670 Cpe05g01060 Cpe-Chr5:7011636 1.26E-170 dispersed
Cpe03g00636 Cpe-Chr3:3792185 Cpe05g01060 Cpe-Chr5:7011636 8.43E-163 dispersed
Cpe05g01060 Cpe-Chr5:7011636 Cpe16g00093 Cpe-Chr16:1768499 0 dispersed
Cpe09g00665 Cpe-Chr9:5502236 Cpe05g01060 Cpe-Chr5:7011636 9.26E-107 dispersed
Cpe12g00834 Cpe-Chr12:7403559 Cpe05g01060 Cpe-Chr5:7011636 4.45E-107 dispersed
Cpe05g01060 Cpe-Chr5:7011636 Cpe14g00481 Cpe-Chr14:3033071 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01060 - - csv:101219265 1370.14