Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01094 ATGGGTTCTAAATCCCAAATCCTATTAAACCCACAAGCTTTGTTTGAAGATGAAGAACATGAAGAAGCATCAACTCAACATCAAATGGAATTCTTCTCTTTCCCTTCAAACTTCAACGTTTCTCATCTTCCTTCAATCCCACAACACCAAACCCTTTCTCCTTCCACTCCCTTTCTTCACCCTAACCTCTCTCAAACCCTAAACTCCTCTCACTTTCCTACTCCACACCTTCTTTCCTTGCAAACCTCCACTCCAAATCCATGGGCATTTGGGAAGAGAAATGAGTATCATTTGGGATTGGGAGTATCAACCATGAAGATGAAGAGGATGAAAGGAAGAAGAAAAGTGAGAGAGCCAAGATTCTCATTCAAGACCATGACCGATGTCGATGTTCTTGATGATGGCTACAAATGGCGCAAAAGCTATTATCGTTGTACACAAGATGATTGTAGGGTTAAGAAACGAGTAGAGAGATTAGATGAAGATCCAAGAATGGTGATAACAACATATGAAGGACGACACATTCATTCTCCTTCCCATGATACTCAACACTCCGAACCTCATACCCATCTCAACAATTTCTTTTGGTAA 591 40.78 MGSKSQILLNPQALFEDEEHEEASTQHQMEFFSFPSNFNVSHLPSIPQHQTLSPSTPFLHPNLSQTLNSSHFPTPHLLSLQTSTPNPWAFGKRNEYHLGLGVSTMKMKRMKGRRKVREPRFSFKTMTDVDVLDDGYKWRKSYYRCTQDDCRVKKRVERLDEDPRMVITTYEGRHIHSPSHDTQHSEPHTHLNNFFW 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7267769 7269724 + Cp4.1LG05g10850.1 Cpe05g01094 470299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01094 196 ProSiteProfiles WRKY domain profile. 127 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe05g01094 196 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 189 IPR044810 GO:0003700
Cpe05g01094 196 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 24 189 - -
Cpe05g01094 196 Pfam WRKY DNA -binding domain 137 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe05g01094 196 MobiDBLite consensus disorder prediction 176 196 - -
Cpe05g01094 196 SMART WRKY_cls 132 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe05g01094 196 Gene3D WRKY domain 117 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe05g01094 196 SUPERFAMILY WRKY DNA-binding domain 124 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01094 Cpe16g00053 CCT
Cpe05g01094 Cpe10g00373 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01094 Cpe-Chr5:7267769 Cpe12g00331 Cpe-Chr12:2190645 5.87E-24 dispersed
Cpe08g00656 Cpe-Chr8:4472570 Cpe05g01094 Cpe-Chr5:7267769 1.33E-18 transposed
Cpe10g00373 Cpe-Chr10:2206612 Cpe05g01094 Cpe-Chr5:7267769 1.70E-48 wgd
Cpe16g00053 Cpe-Chr16:726252 Cpe05g01094 Cpe-Chr5:7267769 7.53E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49570 PF03106 WRKY 1.70E-10 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01094 - - cmo:103497483 241.891