Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01099 ATGAGGCTCTTCTCCTCCTCAACTTTCTCGCTTTCTTCTCTCTGTTCTTCTTCTCCGCCGCGCGCCCTCTTGCTTCACTTTTCTCAATTTTCAGCTTCTTTTTCTTCCAGTAATTACTCTTTCCCTTCCTCATCTTCTTCTAGGCGCCACGACGAAGAGTCTCGATGTGTCAGGGTTTCCGTTTGGTGGGACTTCGAGAATTGCAACATTCCTGCAGGTGTTAACGTGTTTAAGGTCGCCCATTTGATCACTGCCGCTGTCAGGGCCAATGGTATCAAAGGTCCGGTTCAAATTACTGCTTTCGGTGACATTTTGCAGCTCTCAAGGACCAACCAGGAGGCTCTCTCGTCTACTGGAATTAGCCTTACCCACATTCCTCAAGGTGGTAAAAACAGTGCTGATAGGTCTCTTCTTGTAGATCTCATGTGTTGGGTTTCACAAAATCCTCCACCAGCACATCTTTTTCTAATTTCTGGTGACAGGGACTTCGCCAGCATTTTGCACCGCTTAAGAATGAATAACTACAATGTGTTGCTAGCAAGCCCTGAAAGTGCTCCTGGTGTTTTATGCAGTGCTGCAAGCATCATGTGGCATTGGAATGCTTTGGTTAAAGGGGAAAATCTAGTCGGAAGGCATTTTAATCAACCACCTGATGGACCGTATGGTTCTTGGTATGGCCATTATAAAGTTCCTCTTGAAGACCCATTTCCAGTTAATGAGCAAGCATCTTCTATTAGATCCGAGGAGGTTTCTGAGATCAGTTCAGATCCTAAGCCTCTTCCCATTCCAAGGGCAGTCATTAGGGAAATACGTTACATTTTGAAATTATATCCAAAAGGAATCTCCATTACAGATCTCCGATCAGAGTTGGGAAAGAGTAAAATATCTATAGATAGGGACTATTATGGTTACAAAAAGTTTTCACGCTTTCTATTGTCAATGCCACATACTTTAAAGCTTCAAACAAATGGTGATGGCCAATTGATCGTCCGAATTGTCACTCCAAGGACCATAGAGCCATTCGAGTCCAGTAGAGGTACATCTGATAGTGGCACTGAAGAGCAGGATCGTAATCTGATTGCAAAGTTAAACAATAACGGTTCCTCACCAGAATCGACGAGTGTCGGTTCCTCACCAGAATCGACGAGTGTACCACTCGTTCGATCTAGTGAACTAAATGCTCAAGACAGGCCAGAGAAGGTGCAACCATCTTATGAATTACTTAAGTCTACTGGTGAAGCTATGGGAGGGGAACCATCAACGGTCTCTGAGCCACATGTTATGGAAGATTCAAAGCAGAATAGTAAATTTGAAGCTGACAATAATATGATTCCTTCAATTGGACAGCATTCTGAGGCCAAGACGGGGTTTTTTAGAAGAATATGGAGAAGGTTTGTTGTAGGTAGCAAAGACCATAATTCTGAAAATGGAAGTCATCACATTTCTGAAAAATGTTCCACATCAGATGATGCTTCTAAGCAGAAAAGTTGTGGCCATGTGACGAATTATTCTAATCAGAACCTTGGAGAAGCAAAAAGTGAAGGAAAAACTGTAAAGCCAATGAGTCAAGATGCTAATTCAGTGCGTCCAGTTTCAAATTTACCTGATCGTGAGCCTGCTAAGCTTCAAAAAACAGCTGTTGTTGCTAGTGCATATGATGATAAATCAAGATCTAGGCCAGGATTACTTAGTAGCATTAGAAATTGGTTCAAGATTTGGGAAAATGATACTGAGACTGGTAAAGAAAGCGAGCAGTGTTGCGAACAGAACCAGTTAAAAAATGAAAGTGGGAAACATCAACTTTTTTCCAGCAATTCTTTTTGGCAGGACATGCAATCCTTTATTGAAACACCTAAAGGAGTGGAGCTCATTTTGCAGTCAAAAACCAGGTCAGAGATGGCTCAGAAACTGCTAGAGGAAGGACCTTTGGTTCTTAAATCCTTAAGCACTAGCGAGCTCTTCGACTTTATAGAATCGTTAATATCAGATAAGAATTGGCTCGTGGAATGCCCCTCTGAAACAAATCCTTTTAAGGTCACTCTCTCTACTGCTGAGAAAAGCTCTTGCACGAAACCCCTGCATCGTGCAAATGGGTTGACATCAATCTTTATGAACAGAGTATCACAGCCCAGTTTACAGGGATCTTCAGAACATGATTCAGATTCAGATAAGAAAAATGAAAATGTTCCTCAAGCTGGAATTTCTACCACTATGACTAAAAGCAAGTTTCCAGAGCGGACAAGAAGCGAAATATTATGCGACTGTCAAAATCTTGTGGACGAAATCTTGAGAGAACACCCAGAAGGATATAATATGGGGGCTTTCAGAAAACTGTTTCTTGAGAAGTACGGATATCATCTTGACTTGCAGAAGCTTGGTTACCCAAAGTTGGCATCCCTGCTACAGATAATGCCTGGAGTGACAATAGAGTCCACTTTTATAGTTCCCACCGGTAAGGTCCCAAAGGTTTCCCATGTCGTAGCGAACTCGAACTCTGATAACGAATCATCTGACCTGCCTCAAAAGGATGATGATTTTGAGTCAACATGGGAAGAATTAGGTCCAGCATTCACAGACTGCAGGAGCAGAAACGAGGATGAATCGACATTGAGTAGCGAAACAGCAGAAGCAACAGAAAAACGACCAAAAGTTTGTTATGAACCTGTGGTTTTAGAGGATGAATCATCAACAGAGTCTGATGGAGAGTCTTGTCCTACTACACAGAGATCAGAAGAGCAAGCAAAGCCACAAACAAATAAGGAAGAAAGCCCATTACTACAGATCCTTGATTCATGGTATGGCAACAAAGAACACAATAGTAGGAAAAACAATTCAGAAAACAGCGACGAGATGAACGATTGTTTTGAAAATAGTTTGAAGGTCTCTAGTTTAACAGCCAAAAATGAAGCAAATACAGGAAGCTTTGCTCGTAAGCTTAGACATCAAAAGAGCTATTCTTTTGTTTTAGACACGGATGAAAATGACAAGGAAAAGCTGATTGATGGGATTTTGGGTACCTTGAAGAAATCGAGCGAGTCGCGGGGAAACAGTTTTGGGTATTTGAGAAATGGTATAGAGCATAAGTTTCCAAATTCACAAGGACTGAAATTCATTCTCCATTTTGCGGATAACGATTGGGGTGTCACAGATTATCCAATAGTCCCAGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGGAACAATGTGAACAAATTCAAAGTGGGTGATCAAGTAGGGGTAGGTGTCATAGTTGGATCTTGCAAAAGTTGCCAAAACTGTGAACAAAACTTAGAGAATTACTGCCCCAAGTTGATATATACTTACAATGGACATTCATATGATGGAGCGAAGACTTATGGTGGTTATTCGGATAGCATCGTCGTCGATCAGCATTTCGTGCTCCGATTTCCCGACAACTTACCCCTTGATGCCGGAGCTCCACTTCTGTGCGCTGGAATCACAATCTATAGCCCTATGAAATACTATGGAATGACTGAATCTGGTAAGCATTTGGGTGTGGTTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATTAGTACGTCTCCGAGAAAGAAGGAGGAAGCTATTGACAGGCTCGGTGCCGATGCTTTCGTTGTTTCGAGTGATCCTGCACAATTGAAGCTGAATGGAAAGTTGGTGACTGTGGGGTTACCTAACAAGCCACTAGAACTGCCAGTTGCTGCTATAGTGCTCGGTAGGAAGATGGTTGGTGGAAGCAACTTTGGGGGGCTGAAAGAGACACAAGAGATGTTGGATTTCTGTGGTAAACATAACATCACAGCAGAGATTGAGCTGATTCGTATGGACGATATTAACACCGCCATCGAACGCCTTGAGAAAGCCGATGTTCGATATCGGTTCGTGATTGACATTGGAAACTCCTTCAAA 3948 42.35 MRLFSSSTFSLSSLCSSSPPRALLLHFSQFSASFSSSNYSFPSSSSSRRHDEESRCVRVSVWWDFENCNIPAGVNVFKVAHLITAAVRANGIKGPVQITAFGDILQLSRTNQEALSSTGISLTHIPQGGKNSADRSLLVDLMCWVSQNPPPAHLFLISGDRDFASILHRLRMNNYNVLLASPESAPGVLCSAASIMWHWNALVKGENLVGRHFNQPPDGPYGSWYGHYKVPLEDPFPVNEQASSIRSEEVSEISSDPKPLPIPRAVIREIRYILKLYPKGISITDLRSELGKSKISIDRDYYGYKKFSRFLLSMPHTLKLQTNGDGQLIVRIVTPRTIEPFESSRGTSDSGTEEQDRNLIAKLNNNGSSPESTSVGSSPESTSVPLVRSSELNAQDRPEKVQPSYELLKSTGEAMGGEPSTVSEPHVMEDSKQNSKFEADNNMIPSIGQHSEAKTGFFRRIWRRFVVGSKDHNSENGSHHISEKCSTSDDASKQKSCGHVTNYSNQNLGEAKSEGKTVKPMSQDANSVRPVSNLPDREPAKLQKTAVVASAYDDKSRSRPGLLSSIRNWFKIWENDTETGKESEQCCEQNQLKNESGKHQLFSSNSFWQDMQSFIETPKGVELILQSKTRSEMAQKLLEEGPLVLKSLSTSELFDFIESLISDKNWLVECPSETNPFKVTLSTAEKSSCTKPLHRANGLTSIFMNRVSQPSLQGSSEHDSDSDKKNENVPQAGISTTMTKSKFPERTRSEILCDCQNLVDEILREHPEGYNMGAFRKLFLEKYGYHLDLQKLGYPKLASLLQIMPGVTIESTFIVPTGKVPKVSHVVANSNSDNESSDLPQKDDDFESTWEELGPAFTDCRSRNEDESTLSSETAEATEKRPKVCYEPVVLEDESSTESDGESCPTTQRSEEQAKPQTNKEESPLLQILDSWYGNKEHNSRKNNSENSDEMNDCFENSLKVSSLTAKNEANTGSFARKLRHQKSYSFVLDTDENDKEKLIDGILGTLKKSSESRGNSFGYLRNGIEHKFPNSQGLKFILHFADNDWGVTDYPIVPGHEIVGVVTSVGNNVNKFKVGDQVGVGVIVGSCKSCQNCEQNLENYCPKLIYTYNGHSYDGAKTYGGYSDSIVVDQHFVLRFPDNLPLDAGAPLLCAGITIYSPMKYYGMTESGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFVVSSDPAQLKLNGKLVTVGLPNKPLELPVAAIVLGRKMVGGSNFGGLKETQEMLDFCGKHNITAEIELIRMDDINTAIERLEKADVRYRFVIDIGNSFK 1316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7330666 7337757 - Cp4.1LG05g11000.1 Cpe05g01099 470304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01099 1316 Gene3D - 747 814 IPR041966 -
Cpe05g01099 1316 MobiDBLite consensus disorder prediction 710 740 - -
Cpe05g01099 1316 Pfam Alcohol dehydrogenase GroES-like domain 1042 1135 IPR013154 -
Cpe05g01099 1316 Gene3D - 1152 1225 - -
Cpe05g01099 1316 Gene3D - 1226 1281 - -
Cpe05g01099 1316 ProSiteProfiles OST-type HTH domain profile. 262 334 IPR025605 -
Cpe05g01099 1316 MobiDBLite consensus disorder prediction 362 390 - -
Cpe05g01099 1316 MobiDBLite consensus disorder prediction 900 924 - -
Cpe05g01099 1316 MobiDBLite consensus disorder prediction 470 536 - -
Cpe05g01099 1316 PANTHER LIMKAIN B LKAP 19 956 IPR024768 GO:0005777|GO:0010468|GO:1903231
Cpe05g01099 1316 Gene3D - 51 200 - -
Cpe05g01099 1316 CDD CAD1 1039 1310 - -
Cpe05g01099 1316 PANTHER EMB|CAB71880.1 19 956 - -
Cpe05g01099 1316 Pfam NYN domain 58 193 IPR021139 GO:0004540
Cpe05g01099 1316 ProSiteProfiles OST-type HTH domain profile. 751 827 IPR025605 -
Cpe05g01099 1316 Pfam OST-HTH/LOTUS domain 759 811 IPR025605 -
Cpe05g01099 1316 Pfam OST-HTH/LOTUS domain 266 330 IPR025605 -
Cpe05g01099 1316 MobiDBLite consensus disorder prediction 362 433 - -
Cpe05g01099 1316 MobiDBLite consensus disorder prediction 858 888 - -
Cpe05g01099 1316 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 1056 1070 IPR002328 GO:0008270|GO:0016491
Cpe05g01099 1316 CDD LOTUS 752 809 - -
Cpe05g01099 1316 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1141 1279 IPR036291 -
Cpe05g01099 1316 MobiDBLite consensus disorder prediction 935 949 - -
Cpe05g01099 1316 Gene3D - 1039 1151 - -
Cpe05g01099 1316 Gene3D - 1282 1311 - -
Cpe05g01099 1316 SUPERFAMILY GroES-like 1039 1170 IPR011032 -
Cpe05g01099 1316 CDD LOTUS 263 331 - -
Cpe05g01099 1316 CDD PIN_limkain_b1_N_like 58 182 - -
Cpe05g01099 1316 Gene3D - 264 333 IPR041966 -
Cpe05g01099 1316 MobiDBLite consensus disorder prediction 470 490 - -
Cpe05g01099 1316 MobiDBLite consensus disorder prediction 933 952 - -
Cpe05g01099 1316 MobiDBLite consensus disorder prediction 491 512 - -
Cpe05g01099 1316 MobiDBLite consensus disorder prediction 855 924 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01099 Cpe-Chr5:7330666 Cpe10g00530 Cpe-Chr10:3105169 3.76E-112 dispersed
Cpe13g00454 Cpe-Chr13:4842711 Cpe05g01099 Cpe-Chr5:7330666 3.93E-40 transposed
Cpe16g00066 Cpe-Chr16:1293251 Cpe05g01099 Cpe-Chr5:7330666 0 transposed
Cpe16g00065 Cpe-Chr16:1275558 Cpe05g01099 Cpe-Chr5:7330666 4.44E-140 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01099 - - cpep:111796232 1949.48