Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe05g01099 | ATGAGGCTCTTCTCCTCCTCAACTTTCTCGCTTTCTTCTCTCTGTTCTTCTTCTCCGCCGCGCGCCCTCTTGCTTCACTTTTCTCAATTTTCAGCTTCTTTTTCTTCCAGTAATTACTCTTTCCCTTCCTCATCTTCTTCTAGGCGCCACGACGAAGAGTCTCGATGTGTCAGGGTTTCCGTTTGGTGGGACTTCGAGAATTGCAACATTCCTGCAGGTGTTAACGTGTTTAAGGTCGCCCATTTGATCACTGCCGCTGTCAGGGCCAATGGTATCAAAGGTCCGGTTCAAATTACTGCTTTCGGTGACATTTTGCAGCTCTCAAGGACCAACCAGGAGGCTCTCTCGTCTACTGGAATTAGCCTTACCCACATTCCTCAAGGTGGTAAAAACAGTGCTGATAGGTCTCTTCTTGTAGATCTCATGTGTTGGGTTTCACAAAATCCTCCACCAGCACATCTTTTTCTAATTTCTGGTGACAGGGACTTCGCCAGCATTTTGCACCGCTTAAGAATGAATAACTACAATGTGTTGCTAGCAAGCCCTGAAAGTGCTCCTGGTGTTTTATGCAGTGCTGCAAGCATCATGTGGCATTGGAATGCTTTGGTTAAAGGGGAAAATCTAGTCGGAAGGCATTTTAATCAACCACCTGATGGACCGTATGGTTCTTGGTATGGCCATTATAAAGTTCCTCTTGAAGACCCATTTCCAGTTAATGAGCAAGCATCTTCTATTAGATCCGAGGAGGTTTCTGAGATCAGTTCAGATCCTAAGCCTCTTCCCATTCCAAGGGCAGTCATTAGGGAAATACGTTACATTTTGAAATTATATCCAAAAGGAATCTCCATTACAGATCTCCGATCAGAGTTGGGAAAGAGTAAAATATCTATAGATAGGGACTATTATGGTTACAAAAAGTTTTCACGCTTTCTATTGTCAATGCCACATACTTTAAAGCTTCAAACAAATGGTGATGGCCAATTGATCGTCCGAATTGTCACTCCAAGGACCATAGAGCCATTCGAGTCCAGTAGAGGTACATCTGATAGTGGCACTGAAGAGCAGGATCGTAATCTGATTGCAAAGTTAAACAATAACGGTTCCTCACCAGAATCGACGAGTGTCGGTTCCTCACCAGAATCGACGAGTGTACCACTCGTTCGATCTAGTGAACTAAATGCTCAAGACAGGCCAGAGAAGGTGCAACCATCTTATGAATTACTTAAGTCTACTGGTGAAGCTATGGGAGGGGAACCATCAACGGTCTCTGAGCCACATGTTATGGAAGATTCAAAGCAGAATAGTAAATTTGAAGCTGACAATAATATGATTCCTTCAATTGGACAGCATTCTGAGGCCAAGACGGGGTTTTTTAGAAGAATATGGAGAAGGTTTGTTGTAGGTAGCAAAGACCATAATTCTGAAAATGGAAGTCATCACATTTCTGAAAAATGTTCCACATCAGATGATGCTTCTAAGCAGAAAAGTTGTGGCCATGTGACGAATTATTCTAATCAGAACCTTGGAGAAGCAAAAAGTGAAGGAAAAACTGTAAAGCCAATGAGTCAAGATGCTAATTCAGTGCGTCCAGTTTCAAATTTACCTGATCGTGAGCCTGCTAAGCTTCAAAAAACAGCTGTTGTTGCTAGTGCATATGATGATAAATCAAGATCTAGGCCAGGATTACTTAGTAGCATTAGAAATTGGTTCAAGATTTGGGAAAATGATACTGAGACTGGTAAAGAAAGCGAGCAGTGTTGCGAACAGAACCAGTTAAAAAATGAAAGTGGGAAACATCAACTTTTTTCCAGCAATTCTTTTTGGCAGGACATGCAATCCTTTATTGAAACACCTAAAGGAGTGGAGCTCATTTTGCAGTCAAAAACCAGGTCAGAGATGGCTCAGAAACTGCTAGAGGAAGGACCTTTGGTTCTTAAATCCTTAAGCACTAGCGAGCTCTTCGACTTTATAGAATCGTTAATATCAGATAAGAATTGGCTCGTGGAATGCCCCTCTGAAACAAATCCTTTTAAGGTCACTCTCTCTACTGCTGAGAAAAGCTCTTGCACGAAACCCCTGCATCGTGCAAATGGGTTGACATCAATCTTTATGAACAGAGTATCACAGCCCAGTTTACAGGGATCTTCAGAACATGATTCAGATTCAGATAAGAAAAATGAAAATGTTCCTCAAGCTGGAATTTCTACCACTATGACTAAAAGCAAGTTTCCAGAGCGGACAAGAAGCGAAATATTATGCGACTGTCAAAATCTTGTGGACGAAATCTTGAGAGAACACCCAGAAGGATATAATATGGGGGCTTTCAGAAAACTGTTTCTTGAGAAGTACGGATATCATCTTGACTTGCAGAAGCTTGGTTACCCAAAGTTGGCATCCCTGCTACAGATAATGCCTGGAGTGACAATAGAGTCCACTTTTATAGTTCCCACCGGTAAGGTCCCAAAGGTTTCCCATGTCGTAGCGAACTCGAACTCTGATAACGAATCATCTGACCTGCCTCAAAAGGATGATGATTTTGAGTCAACATGGGAAGAATTAGGTCCAGCATTCACAGACTGCAGGAGCAGAAACGAGGATGAATCGACATTGAGTAGCGAAACAGCAGAAGCAACAGAAAAACGACCAAAAGTTTGTTATGAACCTGTGGTTTTAGAGGATGAATCATCAACAGAGTCTGATGGAGAGTCTTGTCCTACTACACAGAGATCAGAAGAGCAAGCAAAGCCACAAACAAATAAGGAAGAAAGCCCATTACTACAGATCCTTGATTCATGGTATGGCAACAAAGAACACAATAGTAGGAAAAACAATTCAGAAAACAGCGACGAGATGAACGATTGTTTTGAAAATAGTTTGAAGGTCTCTAGTTTAACAGCCAAAAATGAAGCAAATACAGGAAGCTTTGCTCGTAAGCTTAGACATCAAAAGAGCTATTCTTTTGTTTTAGACACGGATGAAAATGACAAGGAAAAGCTGATTGATGGGATTTTGGGTACCTTGAAGAAATCGAGCGAGTCGCGGGGAAACAGTTTTGGGTATTTGAGAAATGGTATAGAGCATAAGTTTCCAAATTCACAAGGACTGAAATTCATTCTCCATTTTGCGGATAACGATTGGGGTGTCACAGATTATCCAATAGTCCCAGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGGAACAATGTGAACAAATTCAAAGTGGGTGATCAAGTAGGGGTAGGTGTCATAGTTGGATCTTGCAAAAGTTGCCAAAACTGTGAACAAAACTTAGAGAATTACTGCCCCAAGTTGATATATACTTACAATGGACATTCATATGATGGAGCGAAGACTTATGGTGGTTATTCGGATAGCATCGTCGTCGATCAGCATTTCGTGCTCCGATTTCCCGACAACTTACCCCTTGATGCCGGAGCTCCACTTCTGTGCGCTGGAATCACAATCTATAGCCCTATGAAATACTATGGAATGACTGAATCTGGTAAGCATTTGGGTGTGGTTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATTAGTACGTCTCCGAGAAAGAAGGAGGAAGCTATTGACAGGCTCGGTGCCGATGCTTTCGTTGTTTCGAGTGATCCTGCACAATTGAAGCTGAATGGAAAGTTGGTGACTGTGGGGTTACCTAACAAGCCACTAGAACTGCCAGTTGCTGCTATAGTGCTCGGTAGGAAGATGGTTGGTGGAAGCAACTTTGGGGGGCTGAAAGAGACACAAGAGATGTTGGATTTCTGTGGTAAACATAACATCACAGCAGAGATTGAGCTGATTCGTATGGACGATATTAACACCGCCATCGAACGCCTTGAGAAAGCCGATGTTCGATATCGGTTCGTGATTGACATTGGAAACTCCTTCAAA | 3948 | 42.35 | MRLFSSSTFSLSSLCSSSPPRALLLHFSQFSASFSSSNYSFPSSSSSRRHDEESRCVRVSVWWDFENCNIPAGVNVFKVAHLITAAVRANGIKGPVQITAFGDILQLSRTNQEALSSTGISLTHIPQGGKNSADRSLLVDLMCWVSQNPPPAHLFLISGDRDFASILHRLRMNNYNVLLASPESAPGVLCSAASIMWHWNALVKGENLVGRHFNQPPDGPYGSWYGHYKVPLEDPFPVNEQASSIRSEEVSEISSDPKPLPIPRAVIREIRYILKLYPKGISITDLRSELGKSKISIDRDYYGYKKFSRFLLSMPHTLKLQTNGDGQLIVRIVTPRTIEPFESSRGTSDSGTEEQDRNLIAKLNNNGSSPESTSVGSSPESTSVPLVRSSELNAQDRPEKVQPSYELLKSTGEAMGGEPSTVSEPHVMEDSKQNSKFEADNNMIPSIGQHSEAKTGFFRRIWRRFVVGSKDHNSENGSHHISEKCSTSDDASKQKSCGHVTNYSNQNLGEAKSEGKTVKPMSQDANSVRPVSNLPDREPAKLQKTAVVASAYDDKSRSRPGLLSSIRNWFKIWENDTETGKESEQCCEQNQLKNESGKHQLFSSNSFWQDMQSFIETPKGVELILQSKTRSEMAQKLLEEGPLVLKSLSTSELFDFIESLISDKNWLVECPSETNPFKVTLSTAEKSSCTKPLHRANGLTSIFMNRVSQPSLQGSSEHDSDSDKKNENVPQAGISTTMTKSKFPERTRSEILCDCQNLVDEILREHPEGYNMGAFRKLFLEKYGYHLDLQKLGYPKLASLLQIMPGVTIESTFIVPTGKVPKVSHVVANSNSDNESSDLPQKDDDFESTWEELGPAFTDCRSRNEDESTLSSETAEATEKRPKVCYEPVVLEDESSTESDGESCPTTQRSEEQAKPQTNKEESPLLQILDSWYGNKEHNSRKNNSENSDEMNDCFENSLKVSSLTAKNEANTGSFARKLRHQKSYSFVLDTDENDKEKLIDGILGTLKKSSESRGNSFGYLRNGIEHKFPNSQGLKFILHFADNDWGVTDYPIVPGHEIVGVVTSVGNNVNKFKVGDQVGVGVIVGSCKSCQNCEQNLENYCPKLIYTYNGHSYDGAKTYGGYSDSIVVDQHFVLRFPDNLPLDAGAPLLCAGITIYSPMKYYGMTESGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFVVSSDPAQLKLNGKLVTVGLPNKPLELPVAAIVLGRKMVGGSNFGGLKETQEMLDFCGKHNITAEIELIRMDDINTAIERLEKADVRYRFVIDIGNSFK | 1316 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 7330666 | 7337757 | - | Cp4.1LG05g11000.1 | Cpe05g01099 | 470304 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe05g01099 | 1316 | Gene3D | - | 747 | 814 | IPR041966 | - | |
| Cpe05g01099 | 1316 | MobiDBLite | consensus disorder prediction | 710 | 740 | - | - | |
| Cpe05g01099 | 1316 | Pfam | Alcohol dehydrogenase GroES-like domain | 1042 | 1135 | IPR013154 | - | |
| Cpe05g01099 | 1316 | Gene3D | - | 1152 | 1225 | - | - | |
| Cpe05g01099 | 1316 | Gene3D | - | 1226 | 1281 | - | - | |
| Cpe05g01099 | 1316 | ProSiteProfiles | OST-type HTH domain profile. | 262 | 334 | IPR025605 | - | |
| Cpe05g01099 | 1316 | MobiDBLite | consensus disorder prediction | 362 | 390 | - | - | |
| Cpe05g01099 | 1316 | MobiDBLite | consensus disorder prediction | 900 | 924 | - | - | |
| Cpe05g01099 | 1316 | MobiDBLite | consensus disorder prediction | 470 | 536 | - | - | |
| Cpe05g01099 | 1316 | PANTHER | LIMKAIN B LKAP | 19 | 956 | IPR024768 | GO:0005777|GO:0010468|GO:1903231 | |
| Cpe05g01099 | 1316 | Gene3D | - | 51 | 200 | - | - | |
| Cpe05g01099 | 1316 | CDD | CAD1 | 1039 | 1310 | - | - | |
| Cpe05g01099 | 1316 | PANTHER | EMB|CAB71880.1 | 19 | 956 | - | - | |
| Cpe05g01099 | 1316 | Pfam | NYN domain | 58 | 193 | IPR021139 | GO:0004540 | |
| Cpe05g01099 | 1316 | ProSiteProfiles | OST-type HTH domain profile. | 751 | 827 | IPR025605 | - | |
| Cpe05g01099 | 1316 | Pfam | OST-HTH/LOTUS domain | 759 | 811 | IPR025605 | - | |
| Cpe05g01099 | 1316 | Pfam | OST-HTH/LOTUS domain | 266 | 330 | IPR025605 | - | |
| Cpe05g01099 | 1316 | MobiDBLite | consensus disorder prediction | 362 | 433 | - | - | |
| Cpe05g01099 | 1316 | MobiDBLite | consensus disorder prediction | 858 | 888 | - | - | |
| Cpe05g01099 | 1316 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 1056 | 1070 | IPR002328 | GO:0008270|GO:0016491 | |
| Cpe05g01099 | 1316 | CDD | LOTUS | 752 | 809 | - | - | |
| Cpe05g01099 | 1316 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 1141 | 1279 | IPR036291 | - | |
| Cpe05g01099 | 1316 | MobiDBLite | consensus disorder prediction | 935 | 949 | - | - | |
| Cpe05g01099 | 1316 | Gene3D | - | 1039 | 1151 | - | - | |
| Cpe05g01099 | 1316 | Gene3D | - | 1282 | 1311 | - | - | |
| Cpe05g01099 | 1316 | SUPERFAMILY | GroES-like | 1039 | 1170 | IPR011032 | - | |
| Cpe05g01099 | 1316 | CDD | LOTUS | 263 | 331 | - | - | |
| Cpe05g01099 | 1316 | CDD | PIN_limkain_b1_N_like | 58 | 182 | - | - | |
| Cpe05g01099 | 1316 | Gene3D | - | 264 | 333 | IPR041966 | - | |
| Cpe05g01099 | 1316 | MobiDBLite | consensus disorder prediction | 470 | 490 | - | - | |
| Cpe05g01099 | 1316 | MobiDBLite | consensus disorder prediction | 933 | 952 | - | - | |
| Cpe05g01099 | 1316 | MobiDBLite | consensus disorder prediction | 491 | 512 | - | - | |
| Cpe05g01099 | 1316 | MobiDBLite | consensus disorder prediction | 855 | 924 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe05g01099 | - | - | - | cpep:111796232 | 1949.48 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe05g01099 | Cpe-Chr5:7330666 | Cpe10g00530 | Cpe-Chr10:3105169 | 3.76E-112 | dispersed | |
| Cpe13g00454 | Cpe-Chr13:4842711 | Cpe05g01099 | Cpe-Chr5:7330666 | 3.93E-40 | transposed | |
| Cpe16g00066 | Cpe-Chr16:1293251 | Cpe05g01099 | Cpe-Chr5:7330666 | 0 | transposed | |
| Cpe16g00065 | Cpe-Chr16:1275558 | Cpe05g01099 | Cpe-Chr5:7330666 | 4.44E-140 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi4g1203 | . | . | . | . | . | . | . | . | . | Cmo20g01091 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Bda14g01068 | . | . | . | Bma06g00531 | . | . | . | . | Cma20g01081 | . | . | Cpe05g01099 | . | Bhi10g02352 | Tan07g0908 | Cmetu11g1500 | . | . | . | . | Cla02g00080 | Cam02g0083 | Cec02g0085 | Cco02g0077 | Clacu02g0081 | Cmu02g0079 | Cre02g0419 | Lsi10g00698 | . | . | Cme11g00085 |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cpe05g01008 | CCT | 1 | 503 | Monolignol Biosynthesis Gene Families | AT2G30490 | 86.7 | 1.0e-261 | 899.4 | |
| Cpe16g00690 | CCT,CST | 1 | 503 | Monolignol Biosynthesis Gene Families | AT2G30490 | 85.7 | 3.2e-260 | 894.4 | |
| Cpe02g01119 | CCT,CST | 1 | 530 | Monolignol Biosynthesis Gene Families | AT2G30490 | 74.2 | 5.2e-234 | 807.4 | |
| Cpe11g00652 | . | 948 | 1426 | Monolignol Biosynthesis Gene Families | AT2G30490 | 63.4 | 7.2e-183 | 637.5 | |
| Cpe04g00104 | . | 15 | 501 | Monolignol Biosynthesis Gene Families | AT4G36220 | 66.1 | 2.0e-196 | 682.6 | |
| Cpe19g00843 | . | 2 | 300 | Monolignol Biosynthesis Gene Families | AT4G36220 | 67.0 | 1.6e-113 | 407.1 | |
| Cpe03g00440 | . | 5 | 508 | Monolignol Biosynthesis Gene Families | AT2G40890 | 79.2 | 3.5e-246 | 847.8 | |
| Cpe06g00035 | . | 11 | 244 | Monolignol Biosynthesis Gene Families | AT1G20510 | 67.4 | 1.1e-84 | 311.2 | |
| Cpe02g01315 | . | 1 | 507 | Monolignol Biosynthesis Gene Families | AT4G05160 | 58.6 | 1.0e-179 | 627.1 | |
| Cpe20g00318 | CCT,ECH | 24 | 531 | Monolignol Biosynthesis Gene Families | AT5G63380 | 57.2 | 9.2e-163 | 570.9 | |
| Cpe09g00974 | CCT,ECH | 28 | 497 | Monolignol Biosynthesis Gene Families | AT5G63380 | 52.4 | 6.8e-142 | 501.5 | |
| Cpe06g00035 | . | 11 | 244 | Monolignol Biosynthesis Gene Families | AT1G20510 | 67.4 | 1.1e-84 | 311.2 | |
| Cpe06g00035 | . | 11 | 244 | Monolignol Biosynthesis Gene Families | AT5G38120 | 54.9 | 1.4e-63 | 241.1 | |
| Cpe15g00179 | . | 29 | 538 | Monolignol Biosynthesis Gene Families | AT4G19010 | 56.5 | 2.5e-168 | 589.3 | |
| Cpe05g01008 | CCT | 1 | 503 | Monolignol Biosynthesis Gene Families | AT2G30490 | 86.7 | 1.0e-261 | 899.4 | |
| Cpe16g00690 | CCT,CST | 1 | 503 | Monolignol Biosynthesis Gene Families | AT2G30490 | 85.7 | 3.2e-260 | 894.4 | |
| Cpe02g01119 | CCT,CST | 1 | 530 | Monolignol Biosynthesis Gene Families | AT2G30490 | 74.2 | 5.2e-234 | 807.4 | |
| Cpe11g00652 | . | 948 | 1426 | Monolignol Biosynthesis Gene Families | AT2G30490 | 63.4 | 7.2e-183 | 637.5 | |
| Cpe12g00779 | . | 1 | 430 | Monolignol Biosynthesis Gene Families | AT5G48930 | 78.3 | 1.5e-205 | 712.6 | |
| Cpe17g00636 | . | 1 | 434 | Monolignol Biosynthesis Gene Families | AT5G48930 | 74.8 | 2.4e-195 | 678.7 | |
| Cpe03g00440 | . | 5 | 508 | Monolignol Biosynthesis Gene Families | AT2G40890 | 79.2 | 3.5e-246 | 847.8 | |
| Cpe15g00488 | . | 9 | 249 | Monolignol Biosynthesis Gene Families | AT4G34050 | 90.9 | 1.2e-129 | 459.9 | |
| Cpe04g00280 | . | 9 | 186 | Monolignol Biosynthesis Gene Families | AT4G34050 | 67.6 | 2.7e-86 | 315.8 | |
| Cpe09g00585 | . | 324 | 543 | Monolignol Biosynthesis Gene Families | AT4G34050 | 56.4 | 1.4e-66 | 250.4 | |
| Cpe09g00585 | . | 91 | 277 | Monolignol Biosynthesis Gene Families | AT1G24735 | 61.5 | 9.2e-62 | 233.8 | |
| Cpe15g00488 | . | 63 | 248 | Monolignol Biosynthesis Gene Families | AT1G24735 | 54.3 | 1.3e-52 | 203.4 | |
| Cpe01g00580 | . | 74 | 294 | Monolignol Biosynthesis Gene Families | AT3G61990 | 72.9 | 2.7e-86 | 315.8 | |
| Cpe01g00580 | . | 74 | 282 | Monolignol Biosynthesis Gene Families | AT3G62000 | 73.7 | 4.1e-84 | 308.9 | |
| Cpe09g00585 | . | 911 | 1139 | Monolignol Biosynthesis Gene Families | AT1G67990 | 61.6 | 6.4e-78 | 287.7 | |
| Cpe15g00488 | . | 23 | 248 | Monolignol Biosynthesis Gene Families | AT1G67990 | 52.6 | 6.9e-64 | 241.1 | |
| Cpe09g00585 | . | 114 | 277 | Monolignol Biosynthesis Gene Families | AT1G67980 | 54.9 | 1.6e-43 | 172.9 | |
| Cpe15g00488 | . | 23 | 248 | Monolignol Biosynthesis Gene Families | AT4G26220 | 60.2 | 9.3e-77 | 283.9 | |
| Cpe09g00585 | . | 322 | 542 | Monolignol Biosynthesis Gene Families | AT4G26220 | 54.2 | 3.1e-64 | 242.3 | |
| Cpe12g00773 | . | 127 | 347 | Monolignol Biosynthesis Gene Families | AT1G15950 | 81.9 | 8.8e-102 | 367.1 | |
| Cpe03g00914 | . | 100 | 321 | Monolignol Biosynthesis Gene Families | AT1G15950 | 72.1 | 1.8e-91 | 332.8 | |
| Cpe02g01619 | . | 77 | 287 | Monolignol Biosynthesis Gene Families | AT1G15950 | 69.3 | 1.5e-80 | 296.6 | |
| Cpe03g00913 | . | 96 | 267 | Monolignol Biosynthesis Gene Families | AT1G15950 | 69.8 | 2.4e-67 | 252.7 | |
| Cpe12g00773 | . | 29 | 304 | Monolignol Biosynthesis Gene Families | AT1G80820 | 75.0 | 1.8e-119 | 426.0 | |
| Cpe03g00914 | . | 8 | 275 | Monolignol Biosynthesis Gene Families | AT1G80820 | 74.3 | 3.4e-115 | 411.8 | |
| Cpe02g01619 | . | 299 | 550 | Monolignol Biosynthesis Gene Families | AT1G80820 | 68.4 | 8.2e-101 | 364.0 | |
| Cpe03g00915 | . | 42 | 385 | Monolignol Biosynthesis Gene Families | AT1G80820 | 53.0 | 1.7e-90 | 329.7 | |
| Cpe03g00913 | . | 9 | 221 | Monolignol Biosynthesis Gene Families | AT1G80820 | 57.4 | 1.5e-81 | 300.1 | |
| Cpe04g00104 | . | 15 | 501 | Monolignol Biosynthesis Gene Families | AT4G36220 | 66.1 | 2.0e-196 | 682.6 | |
| Cpe19g00843 | . | 2 | 300 | Monolignol Biosynthesis Gene Families | AT4G36220 | 67.0 | 1.6e-113 | 407.1 | |
| Cpe04g00104 | . | 27 | 501 | Monolignol Biosynthesis Gene Families | AT5G04330 | 58.4 | 1.1e-165 | 580.5 | |
| Cpe19g00843 | . | 1 | 300 | Monolignol Biosynthesis Gene Families | AT5G04330 | 56.2 | 2.3e-88 | 323.6 | |
| Cpe09g00009 | . | 5 | 374 | Monolignol Biosynthesis Gene Families | AT5G54160 | 71.9 | 5.6e-153 | 537.7 | |
| Cpe08g00826 | . | 322 | 663 | Monolignol Biosynthesis Gene Families | AT5G54160 | 54.1 | 6.0e-107 | 384.8 | |
| Cpe16g00065 | . | 33 | 333 | Monolignol Biosynthesis Gene Families | AT4G39330 | 72.1 | 2.7e-132 | 468.8 | |
| Cpe10g00530 | . | 1 | 301 | Monolignol Biosynthesis Gene Families | AT4G39330 | 62.5 | 5.7e-114 | 407.9 | |
| Cpe02g00059 | . | 8 | 304 | Monolignol Biosynthesis Gene Families | AT4G39330 | 56.2 | 2.3e-99 | 359.4 | |
| Cpe05g01099 | . | 1039 | 1259 | Monolignol Biosynthesis Gene Families | AT4G39330 | 64.5 | 1.2e-90 | 330.5 | |
| Cpe05g00755 | . | 12 | 298 | Monolignol Biosynthesis Gene Families | AT4G39330 | 50.7 | 1.4e-75 | 280.4 | |
| Cpe01g00421 | . | 55 | 409 | Monolignol Biosynthesis Gene Families | AT3G19450 | 75.0 | 2.6e-158 | 555.4 | |
| Cpe14g00281 | . | 88 | 444 | Monolignol Biosynthesis Gene Families | AT3G19450 | 74.0 | 2.9e-157 | 552.0 | |
| Cpe16g00065 | . | 44 | 388 | Monolignol Biosynthesis Gene Families | AT3G19450 | 50.4 | 7.4e-105 | 377.9 | |
| Cpe10g00530 | . | 12 | 356 | Monolignol Biosynthesis Gene Families | AT3G19450 | 52.2 | 5.9e-102 | 368.2 | |
| Cpe10g00530 | . | 4 | 294 | Monolignol Biosynthesis Gene Families | AT4G37970 | 61.5 | 7.6e-108 | 387.5 | |
| Cpe16g00065 | . | 36 | 329 | Monolignol Biosynthesis Gene Families | AT4G37970 | 59.2 | 5.1e-104 | 374.8 | |
| Cpe02g00059 | . | 14 | 294 | Monolignol Biosynthesis Gene Families | AT4G37970 | 54.8 | 2.2e-91 | 332.8 | |
| Cpe14g00281 | . | 89 | 378 | Monolignol Biosynthesis Gene Families | AT4G37970 | 50.7 | 1.2e-81 | 300.4 | |
| Cpe10g00530 | . | 12 | 294 | Monolignol Biosynthesis Gene Families | AT4G37980 | 71.7 | 3.6e-118 | 421.8 | |
| Cpe16g00065 | . | 393 | 668 | Monolignol Biosynthesis Gene Families | AT4G37980 | 62.8 | 4.3e-103 | 371.7 | |
| Cpe02g00059 | . | 14 | 294 | Monolignol Biosynthesis Gene Families | AT4G37980 | 55.9 | 1.0e-88 | 323.9 | |
| Cpe14g00281 | . | 94 | 375 | Monolignol Biosynthesis Gene Families | AT4G37980 | 52.3 | 3.0e-80 | 295.8 | |
| Cpe01g00421 | . | 55 | 336 | Monolignol Biosynthesis Gene Families | AT4G37980 | 51.1 | 3.7e-78 | 288.9 | |
| Cpe05g01099 | . | 1039 | 1255 | Monolignol Biosynthesis Gene Families | AT4G37980 | 55.7 | 1.1e-74 | 277.3 | |
| Cpe05g00755 | . | 8 | 280 | Monolignol Biosynthesis Gene Families | AT4G37980 | 50.2 | 9.4e-74 | 274.2 | |
| Cpe10g00530 | . | 12 | 360 | Monolignol Biosynthesis Gene Families | AT4G37990 | 70.8 | 1.0e-143 | 506.9 | |
| Cpe16g00065 | . | 44 | 390 | Monolignol Biosynthesis Gene Families | AT4G37990 | 63.4 | 2.9e-130 | 462.2 | |
| Cpe02g00059 | . | 14 | 354 | Monolignol Biosynthesis Gene Families | AT4G37990 | 57.5 | 6.6e-114 | 407.9 | |
| Cpe01g00421 | . | 61 | 410 | Monolignol Biosynthesis Gene Families | AT4G37990 | 53.4 | 1.5e-105 | 380.2 | |
| Cpe14g00281 | . | 99 | 443 | Monolignol Biosynthesis Gene Families | AT4G37990 | 53.0 | 8.0e-104 | 374.4 | |
| Cpe05g01099 | . | 1039 | 1316 | Monolignol Biosynthesis Gene Families | AT4G37990 | 61.3 | 1.4e-103 | 373.6 | |
| Cpe01g00421 | . | 55 | 409 | Monolignol Biosynthesis Gene Families | AT4G34230 | 77.5 | 1.5e-163 | 572.8 | |
| Cpe14g00281 | . | 88 | 442 | Monolignol Biosynthesis Gene Families | AT4G34230 | 74.4 | 1.9e-158 | 555.8 | |
| Cpe16g00065 | . | 390 | 727 | Monolignol Biosynthesis Gene Families | AT2G21730 | 71.1 | 9.8e-145 | 510.4 | |
| Cpe10g00530 | . | 11 | 361 | Monolignol Biosynthesis Gene Families | AT2G21730 | 61.5 | 2.1e-131 | 466.1 | |
| Cpe02g00059 | . | 14 | 354 | Monolignol Biosynthesis Gene Families | AT2G21730 | 58.2 | 8.7e-117 | 417.5 | |
| Cpe05g01099 | . | 1039 | 1314 | Monolignol Biosynthesis Gene Families | AT2G21730 | 63.0 | 2.5e-108 | 389.4 | |
| Cpe01g00421 | . | 60 | 411 | Monolignol Biosynthesis Gene Families | AT2G21730 | 51.1 | 7.9e-102 | 367.9 | |
| Cpe14g00281 | . | 99 | 444 | Monolignol Biosynthesis Gene Families | AT2G21730 | 50.6 | 7.9e-102 | 367.9 | |
| Cpe16g00065 | . | 390 | 727 | Monolignol Biosynthesis Gene Families | AT2G21890 | 70.1 | 7.0e-143 | 504.2 | |
| Cpe10g00530 | . | 11 | 361 | Monolignol Biosynthesis Gene Families | AT2G21890 | 61.1 | 1.1e-130 | 463.8 | |
| Cpe02g00059 | . | 14 | 354 | Monolignol Biosynthesis Gene Families | AT2G21890 | 57.8 | 1.5e-116 | 416.8 | |
| Cpe05g01099 | . | 1039 | 1314 | Monolignol Biosynthesis Gene Families | AT2G21890 | 62.5 | 3.6e-107 | 385.6 | |
| Cpe01g00421 | . | 60 | 411 | Monolignol Biosynthesis Gene Families | AT2G21890 | 51.3 | 5.4e-103 | 371.7 | |
| Cpe14g00281 | . | 99 | 444 | Monolignol Biosynthesis Gene Families | AT2G21890 | 50.7 | 7.1e-103 | 371.3 | |
| Cpe05g00755 | . | 2 | 355 | Monolignol Biosynthesis Gene Families | AT1G72680 | 75.1 | 1.9e-161 | 565.8 | |
| Cpe16g00065 | . | 48 | 390 | Monolignol Biosynthesis Gene Families | AT1G72680 | 54.8 | 3.9e-103 | 372.1 | |
| Cpe06g00035 | . | 11 | 244 | Monolignol Biosynthesis Gene Families | AT1G20510 | 67.4 | 1.1e-84 | 311.2 | |
| Cpe15g00179 | . | 29 | 538 | Monolignol Biosynthesis Gene Families | AT4G19010 | 56.5 | 2.5e-168 | 589.3 | |
| Cpe02g01315 | . | 1 | 507 | Monolignol Biosynthesis Gene Families | AT4G05160 | 58.6 | 1.0e-179 | 627.1 | |
| Cpe20g00318 | CCT,ECH | 24 | 531 | Monolignol Biosynthesis Gene Families | AT5G63380 | 57.2 | 9.2e-163 | 570.9 | |
| Cpe09g00974 | CCT,ECH | 28 | 497 | Monolignol Biosynthesis Gene Families | AT5G63380 | 52.4 | 6.8e-142 | 501.5 | |
| Cpe06g00035 | . | 11 | 244 | Monolignol Biosynthesis Gene Families | AT5G38120 | 54.9 | 1.4e-63 | 241.1 | |
| Cpe17g00233 | . | 4 | 321 | Monolignol Biosynthesis Gene Families | AT1G76470 | 57.1 | 4.6e-98 | 355.1 | |
| Cpe01g00793 | CST | 7 | 325 | Monolignol Biosynthesis Gene Families | AT2G02400 | 69.9 | 4.4e-138 | 488.0 | |
| Cpe17g00233 | . | 1 | 322 | Monolignol Biosynthesis Gene Families | AT2G33590 | 65.6 | 1.8e-118 | 422.9 | |
| Cpe17g00231 | . | 10 | 372 | Monolignol Biosynthesis Gene Families | AT2G33590 | 58.0 | 1.8e-110 | 396.4 | |
| Cpe17g00233 | . | 4 | 322 | Monolignol Biosynthesis Gene Families | AT2G33600 | 63.8 | 1.1e-115 | 413.7 | |
| Cpe17g00231 | . | 13 | 372 | Monolignol Biosynthesis Gene Families | AT2G33600 | 56.5 | 4.4e-109 | 391.7 | |
| Cpe20g00885 | . | 5 | 326 | Monolignol Biosynthesis Gene Families | AT5G58490 | 69.6 | 6.5e-137 | 484.2 | |
| Cpe08g01069 | . | 10 | 370 | Monolignol Biosynthesis Gene Families | AT3G53140 | 71.9 | 2.1e-152 | 535.8 | |
| Cpe09g00009 | . | 189 | 372 | Monolignol Biosynthesis Gene Families | AT5G37170 | 50.5 | 5.5e-48 | 188.0 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0005338 | 1 | 4 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 39 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cpe05g01099 | Cpe_Chr05 | FPKM | 13.78608 | 16.732212 | 23.211617 | 19.902611 | 10.685395 | 8.254193 | 8.843343 | 1.279195 | 1.374036 | 1.435575 |