Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01150 ATGAGAGCTCATCGTTTGAGCTTCTTCATTTTCTTTCTCTCATTATTCACTTCATTCATCGGAGCCTTCTCGCTTCTTCGCGATTCTGCCATTTCAACTAGGAGGATTCTGCATCAGCCTCTCTTTCCGATTGGCTCTGAGCCGCCGCCGGATATTGAGTTAACCCCGCCGCCGCCGCCTCCTGACTCTCCCTCCGACGTTCCGCCGTTTTTCCATGACCCGCCGACCACTCAAGATCAGACTCAACCGCCTCCTCCGTCTACCAATGGAACTATGCCTATCCCTGCTGCTACGGCGCAACAATCCAAGCCGACGAAGACCGTTGCGATTGCAATTTCGGTTGGGATTGTGACTTTGGGGATGCTCTCTGCTCTGGCGTTTTTTCTGTATCGTCACCGGGCGAAGCATCCGGGGGAGTCGCAGAAGCTTGTTGGAGGGAGTAATCCGGAGAGATTTCCGGAGGATTCGCGTGCGCCGCCGTCGAGTTTTTTCTATATTGGGACTGTGGAGCCGAGCCAGAGCTCTGTTGTTGAGCAGAATGGTGCTAATGGTGCCAATAGTTCGCCTTATCGCAAGCTGAATTCGATTAAGATGTCGGATCGGTACCGGCCGAGTCCGGAATTGCAGCCGCTGCCGCCTCTGCCGAAGCCGCCTATGGCTATGTCGCCTCCCGCTCTGTCGTCTTCGGATGATGAAAGCCAGAATACGGCATTCCATACTCCACAATGCTCGTCAATTGTTAGTCATGATGATGGCTATTTCTCACCGGCTTCTCGTCGAAGTAATTCTGTTAAGAGCTGTTCTACGGCAAGTTTTAAGAATGACCATATGAATTCCAATGCTCCTCCTATTCCTCATTCTAAAAGAACCTCTCCGAAATCTAGATTCTCGGTTTCTTCGACCAAGCGCAATACGTCTCAGCCTCAGCCACCACCGCCGCCGCCTCCACCGCGTCCGCTTGATGACCTTCGTGAAATTCCGAATTCGAAAGAAACAATGCCTTTCTCTTCCACGAGACCTAAATTTTCGAAGCCTCCGCCTCCACCAAATTTGGCGCTTCTTCAAACAATTAGCAATTCCGCCACATATCCTCAAATTCAGAAAACTGCTGCACCTCCACCTCCACCTCCGCCTCCACCGCCACCTCCACGGCCACCGCCGCATCCGGTTTCGTATTCAACGCCACAAAAACTAGGGTTATCGGAAACCAGAATGGCTCCAGTCACTNACCGCCACCTCCACGGCCACCGCCGCATCCGGGTTCCGAGAACAAACTCATCTTCCAAATCCACACCGACATCTGCACCAGCAAATTCCGCTAAAGAAGATGTTGTCGAAAGGATTAATTCGATGGAAAGGCTTGAATCCGAAGATACAGAAGGTTCAAAACCGAGATTGAAGCCCTTGCACTGGGACAAAGTACGGGCAACCTCAGACCGAGCTACAGTTTGGGATCAACTCAAATCAAGCTCATTCCAATTAAACGAGGACATGATGGAAACACTTTTTGGCTTCAATTCTGCAAATTCGGTTCCCAAAGAGGCCACGAGAAAGTCTGTTCTCCCCCCCGTTGAGAAGGAAAATAGGGTATTGGATCCCAAAAAGTCGCAGAACATTGCAATACTCCTAAGAGCTCTTAATGTCACGCGTGATGAAGTGATCGAAGCTCTTCAAGATGGTAACCCGGAAGGGTTTGGTACCGAGCTTTTAGAAACACTAGTGAAGATGGCTCCAACCAAAGAAGAAGAGATAAAACTGAGAGAGTACTGTGGTGATGGTTCAAAATTAGGGACTGCAGAAAGATTTCTGAAGGCAGTGCTTGAAGTCCCATTTGCCTTTAGAAGAGTTGAGGCCATGCTGTACAGAGCCAATTTTGATTCAGAAGTGAAGTATCTAAGGAAGTCATTTCAAACGCTTGAGGTTGCAAGTGAGGAATTAAAGAACAGTAGACTTTTTCTTAAACTCCTCGAAGCAGTTCTTAAGACGGGAAATAGGATGAATGTCGGTACGAATCGTGGTGATGCTAAATCCTTTAAGCTTGAGACCCTCTTAAAATTAGTAGATATAAAGGGAACGGATGGAAAGACAACATTGCTTCATTTTGTTGTTCAAGAAATTATCAGATCAGAAGGTGGTGCTGATTCAACTAGTGACAACCTTCAGCCCCGTTCGCAATCCAAAATCGAGGATGAATTTAGAAAGCAGGGCTTGCAGGTTGTGGCTGGACTGAGCAGAGACCTTAGCAATGTGAAAAAAGCAGCTGGTATGGACTCGGACGTCTTGAGCAGCTATGTCACAAAGCTCGAAATGGGGCTTGAAAAAGTAAGGATGGTTTTGCAATTCGAAAAGCCAGGAATGCATGGAAAGTTCTTCGACTCGATGAAAACATTCTTGAAGGAGGCAGAAGAAGAAATAGTTAGGATCAAGGACGACGAAAGGAAAGCTTTATCTCTGGTGAAAGCGGTCACGGAGTATTTCCATGGCGACGCTGCCAAGGAGGGAGCTCATCCATTCCGAATTTTCATGATCGTTCGGGATTTCCTAACCATACTAGATCAAGTATGCAAAGAAGTTGGGAGAATGCAGGACGGGGTAATGGTGGGTGCTGCAAGATCCTTTCGGATATCAGCAACAGCCTCCCTCCCAGTCCTCAGCAGGTACAACGTCAAACACGACCGAAGTTCCGACGAGGATAGCTCATCTCCGTAA 2709 48.32 MRAHRLSFFIFFLSLFTSFIGAFSLLRDSAISTRRILHQPLFPIGSEPPPDIELTPPPPPPDSPSDVPPFFHDPPTTQDQTQPPPPSTNGTMPIPAATAQQSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGSNPERFPEDSRAPPSSFFYIGTVEPSQSSVVEQNGANGANSSPYRKLNSIKMSDRYRPSPELQPLPPLPKPPMAMSPPALSSSDDESQNTAFHTPQCSSIVSHDDGYFSPASRRSNSVKSCSTASFKNDHMNSNAPPIPHSKRTSPKSRFSVSSTKRNTSQPQPPPPPPPPRPLDDLREIPNSKETMPFSSTRPKFSKPPPPPNLALLQTISNSATYPQIQKTAAPPPPPPPPPPPPRPPPHPVSYSTPQKLGLSETRMAPVTXRHLHGHRRIRVPRTNSSSKSTPTSAPANSAKEDVVERINSMERLESEDTEGSKPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGFNSANSVPKEATRKSVLPPVEKENRVLDPKKSQNIAILLRALNVTRDEVIEALQDGNPEGFGTELLETLVKMAPTKEEEIKLREYCGDGSKLGTAERFLKAVLEVPFAFRRVEAMLYRANFDSEVKYLRKSFQTLEVASEELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKSFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGGADSTSDNLQPRSQSKIEDEFRKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYVTKLEMGLEKVRMVLQFEKPGMHGKFFDSMKTFLKEAEEEIVRIKDDERKALSLVKAVTEYFHGDAAKEGAHPFRIFMIVRDFLTILDQVCKEVGRMQDGVMVGAARSFRISATASLPVLSRYNVKHDRSSDEDSSSP 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7799988 7804672 + Cp4.1LG05g11480.1 Cpe05g01150 470355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01150 902 MobiDBLite consensus disorder prediction 206 222 - -
Cpe05g01150 902 PANTHER FORMIN-LIKE PROTEIN 6 11 902 - -
Cpe05g01150 902 MobiDBLite consensus disorder prediction 43 71 - -
Cpe05g01150 902 MobiDBLite consensus disorder prediction 306 322 - -
Cpe05g01150 902 ProSiteProfiles Formin homology-2 (FH2) domain profile. 456 877 IPR015425 -
Cpe05g01150 902 SUPERFAMILY Formin homology 2 domain (FH2 domain) 373 862 - -
Cpe05g01150 902 Coils Coil 437 457 - -
Cpe05g01150 902 MobiDBLite consensus disorder prediction 166 194 - -
Cpe05g01150 902 MobiDBLite consensus disorder prediction 42 100 - -
Cpe05g01150 902 Pfam Formin Homology 2 Domain 458 851 IPR015425 -
Cpe05g01150 902 MobiDBLite consensus disorder prediction 138 442 - -
Cpe05g01150 902 SMART it6_source 456 866 IPR015425 -
Cpe05g01150 902 Coils Coil 798 818 - -
Cpe05g01150 902 Gene3D Formin, FH2 domain 449 862 IPR042201 -
Cpe05g01150 902 PANTHER FORMIN-RELATED 11 902 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cpe05g01150 902 MobiDBLite consensus disorder prediction 353 367 - -
Cpe05g01150 902 MobiDBLite consensus disorder prediction 226 305 - -
Cpe05g01150 902 MobiDBLite consensus disorder prediction 368 392 - -
Cpe05g01150 902 MobiDBLite consensus disorder prediction 424 438 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00158 Cpe-Chr4:1521779 Cpe05g01150 Cpe-Chr5:7799988 1.22E-123 dispersed
Cpe05g00138 Cpe-Chr5:704681 Cpe05g01150 Cpe-Chr5:7799988 1.44E-171 dispersed
Cpe05g01150 Cpe-Chr5:7799988 Cpe15g00159 Cpe-Chr15:1315160 2.22E-166 dispersed
Cpe19g00667 Cpe-Chr19:5326339 Cpe05g01150 Cpe-Chr5:7799988 1.03E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01150 - - cmo:103497354 1355.12