Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01159 ATGATCTGCACGGCCAAAGCTCGATCTCTTCAACATGCCGTACGCATGGTCAACGGCGTCAAACGAGTACTCATCGGTCCCGGAATAGATGAAGCCAAAATCTTCTTCGATCCAAATTTGACCACCGAAGCCGAAATCCTCGCTGCCACCGATGATTCCGGCTTCGAATCCGAGCTCATCTCCGCCGCAGACGAGGCCTACAAAGTTCATATAAAACTCGATCAAGTTGGCCCTGCGGACATGACCGCCATAAGAACCTCTCTTGAGCAAGCTTCTGGAGTGAACTCTGTTGAAATGGATGGGCTAGGGCAGATGGTTTCCATCCACTATGACCCTGACCGGACTGGTCCGAGGTCCCTTTTGCAGTGCCTCAAGAGCTACGGAGCGAGTTTGTATGTGCCACCGAAGAGAAGAGATGTGGAGCAGCATCAAGAAGCTTGTACTTATAGGAACTTGTTCTTGTTCAGCTGCTTGTTTTCTGTTCCTGTGGTGGCTTTTGCAATGGTGCTTCCTATGCTTCCTCCTTATGGGGAGTGGTTGAATTTTAGGGTTTACAATATGCTTACTGTTGGAATGGTTCTTAAATGGATCTTCTGCACACCAGTCCAGTTCTTTGCTGGCCGGAGATTTTATGTAGGATCATACCGTGCATTACAACAGAAATCAGCAAATATGGATGTTTTGGTTGCTGTAGGCACCAATGCAGCATACTTTTACTCAGTATACATAGTATTTAAAGCATCCACTTCCAACTCTTTTAGAGGGAAAGATTTCTTTGAGTTTAGCTCCATGTTGATCTCCTTCATTCAACTTGGAAAGTATTTGGAGGTCATGGCCAAAGGGAAATCATCAGATGCTTTAGCGAAGCTTGCTCATCTTGCTCCTCATACCGCTTGTTTGATGACCTTTGATGATCATGGAAATTTGCTATCAGAGATGGAGATTGATACCCAGTTGATACAGAGGAATGATATCATTAAGATTGTTGCTGGGGCAAAAGTTCCTGTTGATGGAATTGTTATTAGTGGTGAAAGCAATGTGAATGAGAGTACAATTACTGGAGAAGCAAGATCCATTGCGAAAACACCCGGTGATAAGGTTATTGGCGGGACTGTCAATGAAAATGGATGCTTATTTATTAAGACCACACATGTTGGATCTGATACTACACTTTCTCGAATTGTACAACTAGTGGAATCAGCTCAGCTATCACGAGCACCGGCTCAAAAATTAGCAGACCGGATATCAAAGTTTTTTGTTCCTGTTGTTGTTGTGGCAGCATTTGTGACATGGCTTGGTTGGTTAATTTGTGGGGAAGCTGGTTTGTACCCTAAACATTTTATTCCAAAGGGCATGGATGAGTTTGAACTTGCACTGCAATTTGGCATTTCAGTGCTGGTGATCGCGTGCCCATGTGCCCTTGGTTTAGCAACACCAACTGCTATCATGGTTGCATCAGGGAAGGGTGCTTCTCTTGGTGTCCTCATTAAGGGAGCAAGTGCACTTCAAAATGCATACAAGGTGAAAATGGTAGTTTTCGACAAGACTGGAACTCTAACGGTTGGCAGGCCAGAGGTTGTTAGTGTTGTGCTTTTTTCTACATTTCCAATGCAGGAGCTCTGCGATGTAGCAATAGCAATTGAGTCAAACAGCAAACACCCTTTAGCAAAATGTGTAGTGGATCATGCAATGAAAATGAGAAAAAAGTTTGGGGCCCGAACCGAATGTCGCAAACGCATACAGAACTTTGAGGTGTTCCCGGGAGGAGGGGTTGGAGGAAAAATTGATAGAAAACCAGTTTTAGTAGGAAACCGAAGGCTCATGCGAGCTCACAACATTGTTGTTGGTCCTCAAGTTGATCGTTATGTTATAGAAAATGAGCGGCTGGCTCAAACATGTATATTAGTGGCTATAAATGGCAGGGTAGCTGGAGGTTTTGGTGTTATAGATGCGCCAAAGTCTGGGACTAAAGCTGTTATATCGTATCTTCGCTCAATCGGCATCTCAAGCATAATGGTCACTGGCGATAACTGGGCCACAGCATTTGCCGTTGCAAGAGGGGTTGGGATCAATGAGGTCTTTGCAGAGATGGATCCAATTGGAAAAGCTAACAAGATCAAATCCTTAAAGACAACAGGGAATATTGTGGCAATGGTGGGAGATGGAGTAAACGACTCGCATGCCTTAGCTGCAGCTGATGTTGGCATTGCCATTGGTGCTGGAACAAATATTGCTATAGAAGCAGCTGATATAGTTCTCATGCGAAGCAATTTAGAAGATGTAGTTACAGCCATAGATCTCTCAAGACAAACTGTTTATCGTATATGGCTTAACTACATCTGGGCACTTGGCTATAATATTATAGGTATGCCTATTGCTGCCGGAATCTTATATCCCTTTACTGGAATCCGATTGCCGCCGTGGCTCGCCGGTGCCTGCATGGCTGCTTCCTCCCTTAGCGTCGTATGTTCTTCTCTCTTATTGAAATGCTATAGGAGACCCTTGAATTTTCAATCCACTTGA 2523 44.43 MICTAKARSLQHAVRMVNGVKRVLIGPGIDEAKIFFDPNLTTEAEILAATDDSGFESELISAADEAYKVHIKLDQVGPADMTAIRTSLEQASGVNSVEMDGLGQMVSIHYDPDRTGPRSLLQCLKSYGASLYVPPKRRDVEQHQEACTYRNLFLFSCLFSVPVVAFAMVLPMLPPYGEWLNFRVYNMLTVGMVLKWIFCTPVQFFAGRRFYVGSYRALQQKSANMDVLVAVGTNAAYFYSVYIVFKASTSNSFRGKDFFEFSSMLISFIQLGKYLEVMAKGKSSDALAKLAHLAPHTACLMTFDDHGNLLSEMEIDTQLIQRNDIIKIVAGAKVPVDGIVISGESNVNESTITGEARSIAKTPGDKVIGGTVNENGCLFIKTTHVGSDTTLSRIVQLVESAQLSRAPAQKLADRISKFFVPVVVVAAFVTWLGWLICGEAGLYPKHFIPKGMDEFELALQFGISVLVIACPCALGLATPTAIMVASGKGASLGVLIKGASALQNAYKVKMVVFDKTGTLTVGRPEVVSVVLFSTFPMQELCDVAIAIESNSKHPLAKCVVDHAMKMRKKFGARTECRKRIQNFEVFPGGGVGGKIDRKPVLVGNRRLMRAHNIVVGPQVDRYVIENERLAQTCILVAINGRVAGGFGVIDAPKSGTKAVISYLRSIGISSIMVTGDNWATAFAVARGVGINEVFAEMDPIGKANKIKSLKTTGNIVAMVGDGVNDSHALAAADVGIAIGAGTNIAIEAADIVLMRSNLEDVVTAIDLSRQTVYRIWLNYIWALGYNIIGMPIAAGILYPFTGIRLPPWLAGACMAASSLSVVCSSLLLKCYRRPLNFQST 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7875287 7880804 + Cp4.1LG05g11630.1 Cpe05g01159 470364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01159 840 Gene3D - 479 775 IPR023214 -
Cpe05g01159 840 PRINTS P-type cation-transporting ATPase superfamily signature 644 655 - -
Cpe05g01159 840 PRINTS P-type cation-transporting ATPase superfamily signature 742 754 - -
Cpe05g01159 840 PRINTS P-type cation-transporting ATPase superfamily signature 348 362 - -
Cpe05g01159 840 PRINTS P-type cation-transporting ATPase superfamily signature 666 676 - -
Cpe05g01159 840 PRINTS P-type cation-transporting ATPase superfamily signature 512 526 - -
Cpe05g01159 840 PRINTS P-type cation-transporting ATPase superfamily signature 719 738 - -
Cpe05g01159 840 ProSiteProfiles Heavy-metal-associated domain profile. 1 59 IPR006121 GO:0046872
Cpe05g01159 840 SFLD Haloacid Dehalogenase 494 771 - -
Cpe05g01159 840 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 265 549 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe05g01159 840 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 627 796 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe05g01159 840 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 839 - -
Cpe05g01159 840 SUPERFAMILY HMA, heavy metal-associated domain 1 62 IPR036163 GO:0046872
Cpe05g01159 840 SUPERFAMILY HAD-like 510 825 IPR036412 -
Cpe05g01159 840 ProSitePatterns E1-E2 ATPases phosphorylation site. 514 520 IPR018303 -
Cpe05g01159 840 SUPERFAMILY HMA, heavy metal-associated domain 79 133 IPR036163 GO:0046872
Cpe05g01159 840 Gene3D - 599 650 IPR023299 GO:0000166
Cpe05g01159 840 Gene3D - 519 598 IPR023299 GO:0000166
Cpe05g01159 840 PANTHER COPPER-TRANSPORTING ATPASE HMA4 1 839 - -
Cpe05g01159 840 Pfam E1-E2 ATPase 311 490 - -
Cpe05g01159 840 Gene3D - 1 55 - -
Cpe05g01159 840 PRINTS Copper-transporting ATPase 1 signature 208 233 - -
Cpe05g01159 840 PRINTS Copper-transporting ATPase 1 signature 153 174 - -
Cpe05g01159 840 PRINTS Copper-transporting ATPase 1 signature 188 208 - -
Cpe05g01159 840 PRINTS Copper-transporting ATPase 1 signature 19 42 - -
Cpe05g01159 840 PRINTS Copper-transporting ATPase signature 421 435 - -
Cpe05g01159 840 PRINTS Copper-transporting ATPase signature 792 806 - -
Cpe05g01159 840 PRINTS Copper-transporting ATPase signature 282 300 - -
Cpe05g01159 840 PRINTS Copper-transporting ATPase signature 210 229 - -
Cpe05g01159 840 PRINTS Copper-transporting ATPase signature 262 281 - -
Cpe05g01159 840 PRINTS Copper-transporting ATPase signature 696 713 - -
Cpe05g01159 840 CDD P-type_ATPase_Cu-like 153 815 - -
Cpe05g01159 840 SFLD p-type atpase 494 771 IPR044492 -
Cpe05g01159 840 SUPERFAMILY Calcium ATPase, transmembrane domain M 269 504 IPR023298 -
Cpe05g01159 840 Pfam haloacid dehalogenase-like hydrolase 508 733 - -
Cpe05g01159 840 Gene3D - 280 402 - -
Cpe05g01159 840 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 225 828 IPR027256 GO:0006812|GO:0016021|GO:0019829
Cpe05g01159 840 SUPERFAMILY Calcium ATPase, transduction domain A 312 398 IPR008250 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01159 Cpe-Chr5:7875287 Cpe10g01062 Cpe-Chr10:6338078 0 dispersed
Cpe05g01159 Cpe-Chr5:7875287 Cpe19g00213 Cpe-Chr19:1745088 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01159 K17686 - csv:101214276 1374.76