Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe05g01165 | ATGGCGGACGAGCAGCCTTCAGCCGCAAATCGCCGGAGGAGCCGAGGATCTGAGGCAACCGCTCGCCTTCAGGCTCTGGAACGTCTCAAAGCCATCCGCACTGGCGGCCGTCGATCAGAAGCCGGTGGTTTCCAAGTTAAGTTGGAGAACCCTATCTACGATACGATTCCCGAGGATGAGTATGATGCTCTTGTTGCAAAGCGTCGGGAAGAAGCCCGAGGGTTTATTGTTGACGACGACGGTCTTGGATATGGAGACGAAGGCGAGGAAGAGGATTGGTCCAAAGCTGGGATTTGTTTCTCTGATGAGTCTGATGGCGAGCCTGAGAAACCTAAGAAGAGGAAATCAGAGAAGAAAGAAGCGCAACCGAAGAAGCCCTCTTCTACTTCTCTGTCGGCGGCGGCTGCGATGATGGGGAAACAGAAACTTTCTTCGATGTTCACTTCCTCGATCTTCAGGAAAACGGGTAAAGATGATAAGGCTAAAGGGTTGGCTTGTGACAGTATTGTCGATGATGTGATTGCCGAATTTGCGCCGGATGAGACTGATAGAGAGCGGCGTAGAAAGGGGCAAATCGGAGCTACACCAATATCGAAAACATTTGCGCCTGTTCCTTCTATGAAATGCGAGGGAGTAATTGCTCAGAGTCTTAATTTAACTGGTGGATCTGAATTGGTTAAGGGTACTGTAAACGGGAACTCTGGAATGACCAAGGATTTCACAAACAGTGATTTGGAGTCTGTGCGAGCTGATATAGAGATCCAGGGAAATGGTGAAACTAAGAAATTTGATTCAAAGGATGATTTAGATTCTGAAATCAATCTGGTTTCAGTTGGGCAATCTCATAATCCTTCGATCAAGGAAGATGTAATTGAAGATAATATGCCAATTGTGGTTGAAACGAAGTCAGAATCTTTAGTGAAGAAGGAGCCGGTTTGTACTTTGAATGCTACGATTAGCGATGTAAAAGACCCAGCTTTGAGTGCCACTGCGGGATGGCAAGCAGTGAGAAGTGAAGGGAGTGGAAATGCTGATTCTGCTGCAGATACTTCTGAAGATAAATCCCATTTTGATATTGACGCTGATGGCTCTCTGCCTTTCTATATGGTTGATGCGCATGAGGAGCTCTTCGGTGCAAATATGGGCACCGTATATCTGTTTGGCAAGGTCAAAGCTGGAGATACGTACCACAGTTGTTGTGTGGTGGTGAAAAACGTGCAGAGATGCGTATATGCCATTCCAAGTGCCTCTTTTCTTCATTCGGATGAGATGTTGAAGCTTCAGAACGATGCCGAACAATCCCAGCTTTCTCCTACAGATCTGCGTACCAAGTTGCAAGAAGTGACTGCAGGATTAAAAAATGAAATAGCTCAGCAGTTGCTAGATCTCAATGTTCCAACATTTAGCATGACACCCGTTAAGAGGAAATATGCATTTGAGCGTCAAGACATACCTACGGGGGAAAATTATGTTCTTAAGATTAATTACCCATTCAAGCATCCCCCACTTCCTGCTGATCTAAAAGGAGAATCCTTCTGTGCACTCTTAGGAACACATCGCAGTGCCTTGGAGCTTCTTCTCATTAAAAGGAAAATAAAGGGTCCCTCCTGGTTGTCAATTTCAAAATTTTCTTCCTGTCATGTTTCTCAACGAGTGAGCTGGTGCAAGTTTGAGGTGATAATTGACTCTCCAAAAGATGTTCAGATTTCAACTTCATCAAGCAAAACTTTGGAGATTCCTCCTATGATTGTCACTGCAATAAACATAAAGACCATTATTAATGAAAAGCAGAATGTCAATGAAATTGTGTCTGCATCTGTTATATGCTGTCAAAGAGCGAAGATTGACGGTCCCATGTTAGCCACAGAATGGAAAAAGCCTGGTATGCTTAGACATTTTACTATCATCCGTAAGCTTGATGGAGGCATATTTCCTATGGGATTTGCTAAAGAGTCCACAGATAGAAATTCGAAGGCTGGATCAAATGTTTTAATCTGCGAGGGCAATGATGTGCTGGTTGGACACAATATCTCTGGGTTTGACCTAGATGTTCTTCTCCATCGAGCCCAGTTTTGCCGAGTACCAAGCTGCATGTGGTCCAAAATAGGTCGTCTTAAGCGGTCTGTTATGCCTAAACTTGGAAAAGGAGGGGGCATTTTTGGGTCTGGAGCAAGTCCCGGAGTCATGTCTTGCATTGCTGGTCGGCTCTTATGTGATACGTACTTGTCTTCCCGTGACCTATTGAAAGAGATTAGTTATTCTTTGACAGAGCTAGCAAAGACTCAACTTAACAAGGACCGCAAGGAAGTCACTCCTCACGATATTCCAAGAATGTACCATGCATCAGAGTCTCTCATGAACCTGATTGAATATGGTGAGACAGATGCATGGTTGTCATTGGAACTCATGTTTCATTTAAGTGTTCTTCCCCTTACACGTCAGTTGACTAATATTAGTGGTAACCTCTGGGGAAGAAGTCTGCAGGGTGCTAGAGCCCAGAGAGTAGAGTATCTCTTACTTCATGCATTCCATGCCAAAAAGTATATTGTCCCCGACAAGATTTCAACTTATGTGAAGGAAAAAAAGATGGTTAAAAAGAGAACGAATCATGGTTCTGAGGAAAAAAATCTTGATAATGTTGATTTAGATGATGCAAATATAGAAGCTCCCAATACTGAAAGTGGAAAAGGAAAAAAGGGATCCTCCTATGCAGGTGGGCTAGTCTTGGAGCCAAAACGAGGTTTATATGATAAATATATATTGCTCCTGGACTTCAACAGTCTGTATCCTTCCATCATTCAGGAATATAATATTTGCTTCACCACTGTTGAAAGATCTCCAGATGGTGTCATTCCTTGTCTGCCGTCTAGTAAAGTCACTGGAGTTCTTCCTGAGTTGCTAAAAAATCTGGTTCAGAGGAGAAGAATGGTGAAGTCATGGATGAAGAATGCATCTGGTATCAAGCTCCAGCAACTTGACATTCAACAGCAGGCATTAAAGCTCACTGCAAACAGTATGTATGGATGTCTTGGGTTTTCTAATTCAAGGTTTTATGCAAAACCACTGGCAGAGCTTATTACTTCACAAGGAAGAGAAATACTGCAGAGCACTGTTGATCTTGTACAGAATAATCTGAACCTAGAGGTAATTTATGGTGATACCGATTCAATAATGATTCATAGTGGACTTGATGATATTGGTCAAGTGAAAGCAATTGCAGGAAAAGTTATACAAGAGGTCAACAAAAAGTATAAATGTTTAGAAATTGATCTTGATGGCTTGTATAAGAGAATGCTGCTTCTGAAGAAAAAGAAATATGCAGCTGTGAAGTTGCAGTTCAAGGATGGAACGCCATATGAGGTTATTGAGCGCAAGGGTCTTGATATGGTTCGTCGTGATTGGAGCTTATTGTCAAAGGAATTAGGTGATTTCTGCTTGAGTCAAATATTGTCTGGAGGGTCATGTGAGGACGTCACTGAATCGATACACGATTCTCTTGTGAAGATACAAGAGGATATGAGGAAAGGGCAAGTTGCACTTGAGAAATATATCATCACGAAGACATTGACCAAGCCACCTGAAGCCTATCCTGATGCCAGAAACCAACCACATGTTCAAGTTGCACTAAGGTTAAAACAAATGGGCTATTCAACTGGCTGTTCTGTTGGTGATACGATCCCATATATAATTTGCTGTGAGCAGGGATCTACTTCTGGTGGTTCTGTAGGCATTGCTCAGCGGGCTAGACATCCTGATGAATTAAAGAAGGAAGATGGAAAATGGATGATCGACATCGATTACTACCTGTCACAGCAGATTCACCCTGTGGTTTCTCGTCTATGTGCCTCAATCCAGGGCACTAGCCCAGAACGCTTGGCTGACTGTCTGGGGCTTGATTCATCGAAGTTTCAAAACAAATCAAGTGAAGTTTCCCGAAGTGATGTCTCCTCTTCCCTTTTGTGTTCCATAAACGATGAGGAAAGGTATCAGGGCTGTATACCACTGACATTAACTTGCCCCAGCTGCTCTGGTACTTTTGAGTGTCCTGCTATCTTCAGTTCTATATACAAATCGGCAGATGGAAAGCAAGAAAAGGCAGTTGATGAACCTACAAGCAAATTTTGGAATAATTTGCGTTGTCCGAAATGTCCTGACGAAGCTAGTGCGGGTAGAATGACTCCTGGAATGATTTCCAATCAGGTAAAAAGGCAAGCAGAGAGGTTCATTTCGATGTATTATAATGGCTTACTGATGTGTGAGGATGAAACCTGCAAATATGCCACACGTGCTGTCAATCTTCGAGTTATGGGCGACTCTGAGAAAGGAACCATCTGCCCAAACTATACCCACTGCAATGGGCGTCTAATAAGAAAGTACACAGAAGTGGATTTGTACAAGCAGCTTGCATATTTTAGTCACACTTTGGATACCATACGCTGTATGGAAAAGTTGGAGGTTCATGCAAGGGTAACTTTAGAGAAAGAAATGGCTAAAATTCGGCCAATAGTAGAGTTAGCTGCATCAACAATTCAAAGTCTTCGAGATCGCAGCGCATATGGTTGGGTGCAGCTGCAGGATTTTGTAGTTACAGTTTGA | 4596 | 42.99 | MADEQPSAANRRRSRGSEATARLQALERLKAIRTGGRRSEAGGFQVKLENPIYDTIPEDEYDALVAKRREEARGFIVDDDGLGYGDEGEEEDWSKAGICFSDESDGEPEKPKKRKSEKKEAQPKKPSSTSLSAAAAMMGKQKLSSMFTSSIFRKTGKDDKAKGLACDSIVDDVIAEFAPDETDRERRRKGQIGATPISKTFAPVPSMKCEGVIAQSLNLTGGSELVKGTVNGNSGMTKDFTNSDLESVRADIEIQGNGETKKFDSKDDLDSEINLVSVGQSHNPSIKEDVIEDNMPIVVETKSESLVKKEPVCTLNATISDVKDPALSATAGWQAVRSEGSGNADSAADTSEDKSHFDIDADGSLPFYMVDAHEELFGANMGTVYLFGKVKAGDTYHSCCVVVKNVQRCVYAIPSASFLHSDEMLKLQNDAEQSQLSPTDLRTKLQEVTAGLKNEIAQQLLDLNVPTFSMTPVKRKYAFERQDIPTGENYVLKINYPFKHPPLPADLKGESFCALLGTHRSALELLLIKRKIKGPSWLSISKFSSCHVSQRVSWCKFEVIIDSPKDVQISTSSSKTLEIPPMIVTAINIKTIINEKQNVNEIVSASVICCQRAKIDGPMLATEWKKPGMLRHFTIIRKLDGGIFPMGFAKESTDRNSKAGSNVLICEGNDVLVGHNISGFDLDVLLHRAQFCRVPSCMWSKIGRLKRSVMPKLGKGGGIFGSGASPGVMSCIAGRLLCDTYLSSRDLLKEISYSLTELAKTQLNKDRKEVTPHDIPRMYHASESLMNLIEYGETDAWLSLELMFHLSVLPLTRQLTNISGNLWGRSLQGARAQRVEYLLLHAFHAKKYIVPDKISTYVKEKKMVKKRTNHGSEEKNLDNVDLDDANIEAPNTESGKGKKGSSYAGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSPDGVIPCLPSSKVTGVLPELLKNLVQRRRMVKSWMKNASGIKLQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITSQGREILQSTVDLVQNNLNLEVIYGDTDSIMIHSGLDDIGQVKAIAGKVIQEVNKKYKCLEIDLDGLYKRMLLLKKKKYAAVKLQFKDGTPYEVIERKGLDMVRRDWSLLSKELGDFCLSQILSGGSCEDVTESIHDSLVKIQEDMRKGQVALEKYIITKTLTKPPEAYPDARNQPHVQVALRLKQMGYSTGCSVGDTIPYIICCEQGSTSGGSVGIAQRARHPDELKKEDGKWMIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFQNKSSEVSRSDVSSSLLCSINDEERYQGCIPLTLTCPSCSGTFECPAIFSSIYKSADGKQEKAVDEPTSKFWNNLRCPKCPDEASAGRMTPGMISNQVKRQAERFISMYYNGLLMCEDETCKYATRAVNLRVMGDSEKGTICPNYTHCNGRLIRKYTEVDLYKQLAYFSHTLDTIRCMEKLEVHARVTLEKEMAKIRPIVELAASTIQSLRDRSAYGWVQLQDFVVTV | 1531 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 7937100 | 7949332 | + | Cp4.1LG05g11640.1 | Cpe05g01165 | 470370 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe05g01165 | 1531 | MobiDBLite | consensus disorder prediction | 76 | 137 | - | - | |
| Cpe05g01165 | 1531 | Gene3D | - | 580 | 879 | IPR036397 | GO:0003676 | |
| Cpe05g01165 | 1531 | CDD | POLBc_alpha | 896 | 1299 | IPR045846 | GO:0003887|GO:1902975 | |
| Cpe05g01165 | 1531 | SMART | polmehr3 | 580 | 1063 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
| Cpe05g01165 | 1531 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Cpe05g01165 | 1531 | CDD | DNA_polB_alpha_exo | 580 | 814 | - | - | |
| Cpe05g01165 | 1531 | Gene3D | - | 407 | 533 | - | - | |
| Cpe05g01165 | 1531 | Coils | Coil | 1077 | 1097 | - | - | |
| Cpe05g01165 | 1531 | PANTHER | DNA POLYMERASE ALPHA CATALYTIC SUBUNIT | 13 | 1529 | - | - | |
| Cpe05g01165 | 1531 | Pfam | DNA polymerase family B, exonuclease domain | 395 | 612 | IPR006133 | - | |
| Cpe05g01165 | 1531 | Pfam | DNA polymerase family B, exonuclease domain | 670 | 757 | IPR006133 | - | |
| Cpe05g01165 | 1531 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Cpe05g01165 | 1531 | Pfam | DNA Polymerase alpha zinc finger | 1322 | 1527 | IPR015088 | GO:0003887|GO:0006260 | |
| Cpe05g01165 | 1531 | Pfam | DNA polymerase family B | 823 | 1283 | IPR006134 | GO:0000166|GO:0003677 | |
| Cpe05g01165 | 1531 | Gene3D | - | 367 | 566 | - | - | |
| Cpe05g01165 | 1531 | MobiDBLite | consensus disorder prediction | 865 | 901 | - | - | |
| Cpe05g01165 | 1531 | SUPERFAMILY | DNA/RNA polymerases | 847 | 1299 | IPR043502 | - | |
| Cpe05g01165 | 1531 | Gene3D | DNA Polymerase alpha, zinc finger | 1322 | 1515 | IPR038256 | - | |
| Cpe05g01165 | 1531 | SUPERFAMILY | Ribonuclease H-like | 362 | 851 | IPR012337 | - | |
| Cpe05g01165 | 1531 | MobiDBLite | consensus disorder prediction | 865 | 882 | - | - | |
| Cpe05g01165 | 1531 | MobiDBLite | consensus disorder prediction | 88 | 124 | - | - | |
| Cpe05g01165 | 1531 | TIGRFAM | pol2: DNA polymerase (pol2) | 51 | 1281 | - | - | |
| Cpe05g01165 | 1531 | Gene3D | Palm domain of DNA polymerase | 902 | 1107 | IPR023211 | - | |
| Cpe05g01165 | 1531 | Gene3D | - | 1127 | 1313 | IPR042087 | - | |
| Cpe05g01165 | 1531 | Pfam | DNA polymerase alpha subunit p180 N terminal | 26 | 93 | IPR024647 | - | |
| Cpe05g01165 | 1531 | ProSitePatterns | DNA polymerase family B signature. | 1051 | 1059 | IPR017964 | GO:0000166|GO:0003676 | |
| Cpe05g01165 | 1531 | Gene3D | Helix hairpin bin | 961 | 1012 | - | - | |
| Cpe05g01165 | 1531 | PRINTS | DNA-directed DNA-polymerase family B signature | 920 | 933 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
| Cpe05g01165 | 1531 | PRINTS | DNA-directed DNA-polymerase family B signature | 996 | 1008 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
| Cpe05g01165 | 1531 | PRINTS | DNA-directed DNA-polymerase family B signature | 1049 | 1057 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe05g01165 | K02320 | POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7] | - | csv:101211201 | 2626.66 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe05g01165 | Cpe-Chr5:7937100 | Cpe19g00507 | Cpe-Chr19:4315970 | 1.55E-44 | dispersed |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cpe06g01023 | . | 106 | 786 | Core DNA Replication Machinery Family | AT4G14700 | 65.0 | 4.4e-259 | 891.3 | |
| Cpe06g01023 | . | 73 | 786 | Core DNA Replication Machinery Family | AT4G12620 | 65.7 | 1.7e-271 | 932.6 | |
| Cpe07g00469 | . | 1 | 276 | Core DNA Replication Machinery Family | AT2G37560 | 68.1 | 2.7e-109 | 392.5 | |
| Cpe01g01014 | . | 9 | 410 | Core DNA Replication Machinery Family | AT2G01120 | 65.8 | 3.4e-154 | 542.0 | |
| Cpe12g00375 | . | 3 | 536 | Core DNA Replication Machinery Family | AT4G29910 | 56.9 | 1.6e-167 | 586.6 | |
| Cpe11g00701 | . | 1 | 226 | Core DNA Replication Machinery Family | AT1G26840 | 73.0 | 1.5e-89 | 326.6 | |
| Cpe08g00047 | . | 962 | 1793 | Core DNA Replication Machinery Family | AT1G79150 | 58.4 | 2.9e-242 | 835.5 | |
| Cpe15g00894 | . | 1 | 368 | Core DNA Replication Machinery Family | AT1G79150 | 52.6 | 2.1e-102 | 370.9 | |
| Cpe03g00916 | . | 9 | 939 | Core DNA Replication Machinery Family | AT1G44900 | 75.2 | 0.0e+00 | 1335.9 | |
| Cpe08g00006 | . | 1 | 966 | Core DNA Replication Machinery Family | AT1G44900 | 73.4 | 0.0e+00 | 1331.6 | |
| Cpe19g01129 | CCT | 65 | 636 | Core DNA Replication Machinery Family | AT5G46280 | 81.5 | 2.1e-268 | 921.8 | |
| Cpe04g00111 | CST | 1 | 845 | Core DNA Replication Machinery Family | AT2G16440 | 74.9 | 0.0e+00 | 1179.5 | |
| Cpe15g00556 | CST | 1 | 845 | Core DNA Replication Machinery Family | AT2G16440 | 76.9 | 0.0e+00 | 1159.4 | |
| Cpe07g01135 | . | 1 | 735 | Core DNA Replication Machinery Family | AT2G07690 | 78.4 | 0.0e+00 | 1114.0 | |
| Cpe19g01218 | . | 7 | 818 | Core DNA Replication Machinery Family | AT5G44635 | 71.6 | 0.0e+00 | 1170.6 | |
| Cpe17g00747 | . | 11 | 722 | Core DNA Replication Machinery Family | AT4G02060 | 85.7 | 0.0e+00 | 1218.0 | |
| Cpe12g00890 | . | 8 | 678 | Core DNA Replication Machinery Family | AT4G02060 | 81.3 | 0.0e+00 | 1137.9 | |
| Cpe16g00653 | . | 30 | 518 | Core DNA Replication Machinery Family | AT2G29680 | 60.4 | 1.4e-162 | 570.1 | |
| Cpe16g00653 | . | 30 | 479 | Core DNA Replication Machinery Family | AT1G07270 | 58.1 | 2.0e-142 | 503.1 | |
| Cpe12g01089 | . | 1 | 593 | Core DNA Replication Machinery Family | AT3G25100 | 76.6 | 5.2e-257 | 884.0 | |
| Cpe08g01122 | . | 37 | 715 | Core DNA Replication Machinery Family | AT3G09660 | 67.0 | 2.4e-278 | 955.3 | |
| Cpe15g00364 | . | 16 | 642 | Core DNA Replication Machinery Family | AT2G14050 | 78.4 | 2.3e-287 | 984.9 | |
| Cpe16g00316 | . | 1 | 437 | Core DNA Replication Machinery Family | AT2G20980 | 51.3 | 2.6e-111 | 399.4 | |
| Cpe06g00607 | CCT | 7 | 893 | Core DNA Replication Machinery Family | AT1G77320 | 50.1 | 5.9e-237 | 818.1 | |
| Cpe17g00581 | . | 1 | 200 | Core DNA Replication Machinery Family | AT1G80190 | 66.8 | 7.5e-75 | 277.3 | |
| Cpe19g00178 | . | 1 | 145 | Core DNA Replication Machinery Family | AT3G12530 | 73.1 | 1.2e-61 | 233.0 | |
| Cpe01g02514 | . | 8 | 177 | Core DNA Replication Machinery Family | AT1G19080 | 64.1 | 1.7e-57 | 219.5 | |
| Cpe01g02514 | . | 8 | 177 | Core DNA Replication Machinery Family | AT3G55490 | 64.1 | 1.7e-57 | 219.5 | |
| Cpe03g01740 | . | 15 | 164 | Core DNA Replication Machinery Family | AT5G49010 | 66.7 | 5.0e-52 | 201.4 | |
| Cpe05g01165 | . | 1 | 1529 | Core DNA Replication Machinery Family | AT5G67100 | 59.5 | 0.0e+00 | 1731.1 | |
| Cpe09g00571 | . | 2 | 625 | Core DNA Replication Machinery Family | AT1G67630 | 63.5 | 1.3e-223 | 773.1 | |
| Cpe17g01067 | . | 1 | 359 | Core DNA Replication Machinery Family | AT1G67320 | 53.3 | 1.8e-130 | 463.4 | |
| Cpe06g00974 | . | 1 | 483 | Core DNA Replication Machinery Family | AT5G41880 | 60.2 | 1.7e-172 | 602.8 | |
| Cpe19g00507 | . | 47 | 1084 | Core DNA Replication Machinery Family | AT5G63960 | 80.4 | 0.0e+00 | 1696.4 | |
| Cpe03g00370 | . | 15 | 431 | Core DNA Replication Machinery Family | AT2G42120 | 73.1 | 3.6e-191 | 664.8 | |
| Cpe17g01067 | . | 1 | 359 | Core DNA Replication Machinery Family | AT1G67320 | 53.3 | 1.8e-130 | 463.4 | |
| Cpe05g00419 | . | 1 | 2115 | Core DNA Replication Machinery Family | AT1G08260 | 70.1 | 0.0e+00 | 2947.9 | |
| Cpe05g00419 | . | 9 | 2221 | Core DNA Replication Machinery Family | AT2G27120 | 67.0 | 0.0e+00 | 2918.3 | |
| Cpe02g01094 | . | 7 | 502 | Core DNA Replication Machinery Family | AT5G22110 | 69.0 | 2.1e-195 | 679.1 | |
| Cpe05g00456 | . | 1 | 929 | Core DNA Replication Machinery Family | AT5G22010 | 62.6 | 3.9e-304 | 1041.2 | |
| Cpe14g00835 | . | 1 | 333 | Core DNA Replication Machinery Family | AT1G63160 | 89.5 | 3.8e-172 | 601.3 | |
| Cpe10g01069 | . | 11 | 275 | Core DNA Replication Machinery Family | AT5G27740 | 65.4 | 7.0e-92 | 334.7 | |
| Cpe02g00567 | . | 3 | 323 | Core DNA Replication Machinery Family | AT1G21690 | 80.7 | 3.3e-144 | 508.4 | |
| Cpe01g02062 | . | 1 | 363 | Core DNA Replication Machinery Family | AT1G77470 | 73.9 | 2.6e-150 | 528.9 | |
| Cpe13g00630 | . | 1 | 455 | Core DNA Replication Machinery Family | AT1G77470 | 62.9 | 2.3e-146 | 515.8 | |
| Cpe11g01184 | . | 34 | 626 | Core DNA Replication Machinery Family | AT2G06510 | 69.0 | 2.3e-252 | 868.6 | |
| Cpe11g01188 | . | 26 | 618 | Core DNA Replication Machinery Family | AT2G06510 | 69.0 | 2.3e-252 | 868.6 | |
| Cpe08g00899 | . | 30 | 697 | Core DNA Replication Machinery Family | AT2G06510 | 52.1 | 1.1e-201 | 700.3 | |
| Cpe14g01003 | . | 34 | 685 | Core DNA Replication Machinery Family | AT2G06510 | 52.6 | 1.0e-199 | 693.7 | |
| Cpe04g01458 | . | 1 | 622 | Core DNA Replication Machinery Family | AT5G08020 | 67.9 | 3.5e-245 | 844.7 | |
| Cpe08g00899 | . | 6 | 804 | Core DNA Replication Machinery Family | AT5G45400 | 51.7 | 7.0e-231 | 797.7 | |
| Cpe14g01003 | . | 10 | 784 | Core DNA Replication Machinery Family | AT5G45400 | 51.6 | 4.8e-224 | 775.0 | |
| Cpe04g01458 | . | 1 | 617 | Core DNA Replication Machinery Family | AT5G61000 | 65.6 | 6.7e-239 | 823.9 | |
| Cpe08g00899 | . | 1 | 818 | Core DNA Replication Machinery Family | AT4G19130 | 53.3 | 4.9e-231 | 798.1 | |
| Cpe14g01003 | . | 5 | 771 | Core DNA Replication Machinery Family | AT4G19130 | 54.8 | 8.7e-228 | 787.3 | |
| Cpe02g00418 | . | 1 | 252 | Core DNA Replication Machinery Family | AT2G24490 | 50.2 | 4.2e-68 | 255.4 | |
| Cpe04g00203 | . | 1 | 402 | Core DNA Replication Machinery Family | AT5G26680 | 80.7 | 5.5e-181 | 630.9 | |
| Cpe03g01241 | . | 1 | 297 | Core DNA Replication Machinery Family | AT2G25100 | 66.7 | 1.0e-114 | 410.2 | |
| Cpe16g00505 | . | 44 | 785 | Core DNA Replication Machinery Family | AT1G08130 | 66.3 | 5.4e-278 | 954.1 | |
| Cpe16g00505 | . | 204 | 785 | Core DNA Replication Machinery Family | AT1G49250 | 66.6 | 3.6e-227 | 785.0 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0009628 | 2 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 32 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cpe05g01165 | Cpe_Chr05 | FPKM | 1.718765 | 1.176455 | 2.738194 | 3.279846 | 3.107423 | 2.527092 | 2.744113 | 1.253832 | 1.007424 | 1.205611 |