Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01179 TGTTTAATCATGAGCTGCCATTGGAGCTGCAGAGTTCTTGCTCTGCTTCTTCTTCTTCTTCTTCTTCAATGTTGTTGTGATGGCTTGAATTCTGATGGAGTTTTCTTGCTTTCCTTTAAGTATGGCGTTTTGGACGACCCTCTTTTTGTGCTTCAGAACTGGAATTACTCCGATGACACGCCGTGTTCATGGCGGGGTGTCACCTGCGGCGGTGATGGTGCTACGGTTACAGCTTTATCGCTACCCAATTCTCTGCTTATGGGCTCTGTTTCATCTGATCTGGGTTTGATTCAAAGCCTTCAATTTGTTGATCTTTCGAACAATTCCTTTAATGGGTCTCTTCCTTTGTCTCTGTTCAACAATTCCATGCTTCGGTTTCTTGATTTGTCGGAGAATTTGATTTCCGATGAGGTTCCGGCGGCGGTGAGTCGACTTGGGAATCTGCAAGTTCTTAACCTCTCCGGCAATGCTCTGTTCGGGGAGTTTCCGAGTGATCTTGCGAATTTGGGTAATCTCACGGTTATATCTCTTAAGAACAATTACATTTCCGGGGAACTTCCTGGTCGGTTCGGAACGGTTGAGGTTTTAGATCTGTCTACTAATTTGATTAATGGGTCTTTGCCGTTCGATTTTGGTGGCGACAGTTTACGTTACTTCAACATCTCGTATAATAGACTTTCCGGCGAAATCCCGCCGGATTTCGCCCACAAAATCCCAGCCAACGCCACGATTGATCTCTCATTCAATAATTTCACCGGTGAAGTCCCTGTTTCCGACGTGTTCATGAACCAAGAAGCAAACTCCTTTGCCGGAAACCGCCAACTCTGCGGCGAGATAACGAAAACTGCATGCCCAATTCCTTCGTCGCCGGCGTCTCTCCCACCGGCAATCGCCGCCATGCCAATCGACCCAAGTACGCCAGAAACCACCTCGCCGGAAAAAGAGAGCGGAACAGGGCTAAAATCCTCAACTATAGTCGCGATTGTACTCGGCGACGTCGTCGGATTCGCAATTCTGTGCCTCCTCTTCTTCTACGTCTACCACTTGAAGAAAAAAAACAAAACCGACGAAACCCATTTGAAAAACGAATCCAATTTGGCCAAAGACAGCTGGTCCACATCTTCATCGGAATCCAGAGGATTTTCACGATGGTCCTGCCTGAGAAAAAAAGAGTATCCAGAAGAGGGAAATTCCGAGCAGGTTAGTATCGGTTCCATCTCCGGCCGCCGCGACACAACGGAGGAGGGCGGAGAAGGGAACAAAAGGGGAACTTTAGTGACAGTAGACGGCGGAGAGAAAGAGCTGGAACTTGAGACGCTATTGAAAGCGTCGGCGTACATCCTCGGCGCTACCGGATCGAGCATAACGTACAAGGCAGTGCTGGAAGACGGCACTGCATTTGCAGTGCGGAGAATCGGCGACGGCGGAGTTGAAAAGTATAAGGATTTCGAGAATCAAATTCGAGTTGTAGCCAAATTGGTTCATCCAAATTTGGTTCGTGTTCGTGGGTTCTATTGGGGCGTCGATGAGAAGCTCATCATTTATGAGTTCGTTCCCAATGGGAAAGTGGGCTCTTCACCTTGTCATCTTCCATGGGAGGCCCGATTGAGAATAGCAAAAGGAGTAGCCCGTGGCCTTTCTTATCTCCATGACAAGAAGCACGTCCATGCCAACTTAAGACCTACCAACATTCTTTTGGGCTACGATATGGAGCCCAAGATAGGCGACTTGGGTCTCGACAAGGTCTTATTCGGCGATTCGACTTACAAAACGGGTAGCTCCACTCGAAACTTCGGGAGTAAGAGGTCAACTGCATCTCGTGATAGCTTCCAAGACTTCGTTACTGGACCTAGCCCTGGACCAAGTCCAAGTCCTAGCTGGATCAGTGGAGTGTCACCATACTTAGCACCAGAATCGCTTCGGAGCTTGAAGCCTACTCCAAAGTGGGATGTGTACTCTTTTGGAGTGATACTACTGGAGCTACTAACTGGAAAGATCATTGTGTTGGATGAGTTGGGTCAAGGGCTTGAGCTTGCAGTCCACGATAAAAGTCGAGCTTTAAGAATGGCTGACATGGCGATTCGAGCTGACGTGGAGGGGAGAGAAGATGCATTATTATCATTCTTTAAATTAGGTTATACTTGTGCATCTCCAACCCCACAAAAGAGACCATCCATGAAGGAAGCCTTACAGGTTTTGGATAAATTTCCAACTATATCCACGTCATCACACTATTATGGTCTCTAG 2247 47.66 CLIMSCHWSCRVLALLLLLLLLQCCCDGLNSDGVFLLSFKYGVLDDPLFVLQNWNYSDDTPCSWRGVTCGGDGATVTALSLPNSLLMGSVSSDLGLIQSLQFVDLSNNSFNGSLPLSLFNNSMLRFLDLSENLISDEVPAAVSRLGNLQVLNLSGNALFGEFPSDLANLGNLTVISLKNNYISGELPGRFGTVEVLDLSTNLINGSLPFDFGGDSLRYFNISYNRLSGEIPPDFAHKIPANATIDLSFNNFTGEVPVSDVFMNQEANSFAGNRQLCGEITKTACPIPSSPASLPPAIAAMPIDPSTPETTSPEKESGTGLKSSTIVAIVLGDVVGFAILCLLFFYVYHLKKKNKTDETHLKNESNLAKDSWSTSSSESRGFSRWSCLRKKEYPEEGNSEQVSIGSISGRRDTTEEGGEGNKRGTLVTVDGGEKELELETLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRVVAKLVHPNLVRVRGFYWGVDEKLIIYEFVPNGKVGSSPCHLPWEARLRIAKGVARGLSYLHDKKHVHANLRPTNILLGYDMEPKIGDLGLDKVLFGDSTYKTGSSTRNFGSKRSTASRDSFQDFVTGPSPGPSPSPSWISGVSPYLAPESLRSLKPTPKWDVYSFGVILLELLTGKIIVLDELGQGLELAVHDKSRALRMADMAIRADVEGREDALLSFFKLGYTCASPTPQKRPSMKEALQVLDKFPTISTSSHYYGL 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8132827 8135610 + Cp4.1LG05g11810.1 Cpe05g01179 470384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01179 748 MobiDBLite consensus disorder prediction 593 627 - -
Cpe05g01179 748 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Cpe05g01179 748 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 16 738 - -
Cpe05g01179 748 SUPERFAMILY L domain-like 34 277 - -
Cpe05g01179 748 MobiDBLite consensus disorder prediction 593 617 - -
Cpe05g01179 748 Pfam Protein kinase domain 448 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01179 748 PANTHER BNAC07G16060D PROTEIN 16 738 - -
Cpe05g01179 748 Pfam Leucine Rich Repeat 215 235 IPR001611 GO:0005515
Cpe05g01179 748 Pfam Leucine Rich Repeat 147 169 IPR001611 GO:0005515
Cpe05g01179 748 Gene3D Phosphorylase Kinase; domain 1 419 517 - -
Cpe05g01179 748 SUPERFAMILY Protein kinase-like (PK-like) 447 735 IPR011009 -
Cpe05g01179 748 Gene3D Transferase(Phosphotransferase) domain 1 521 744 - -
Cpe05g01179 748 MobiDBLite consensus disorder prediction 395 425 - -
Cpe05g01179 748 ProSiteProfiles Protein kinase domain profile. 442 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01179 748 Gene3D Ribonuclease Inhibitor 29 190 IPR032675 -
Cpe05g01179 748 Gene3D Ribonuclease Inhibitor 191 286 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01179 Cpe16g00149 CCT
Cpe05g01179 Cpe16g00149 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01179 Cpe-Chr5:8132827 Cpe14g00283 Cpe-Chr14:1648635 0 dispersed
Cpe16g00149 Cpe-Chr16:3510721 Cpe05g01179 Cpe-Chr5:8132827 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62438 PF00069 Pkinase 4.50E-27 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01179 - - bhj:120088533 1196.03