Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01181 ATGGCGGTGGAGCTTCTCTCAGCCTACACCAACGCCCATCTCTCCGCCGCAATGGACCAAGACTCCGCCGTCCATGAAGCCGCCTCCGGTATCCACACCCTCAAAAAGCTCATCTCATTACTCTCCCACTCCCCACCTTCTAACCTCGACTCCGATTGCCAAGCCGTTGCTAACGCCGCCGTCTCCCATTTCAAAAAGGCCATTTCTCTCCTCGGCCACTCCCCTCGTACCGGACACGCTCGATTCCGCCGCGCCCCTTTAGATTCCTCTCAAATTTACAACGCAACCCCCATTCAGCAAATCCCTCCGCCGCCTCTCGAATCAGCCACCACCATTAATTTCTCTCATTCCTCGTTTCCCGCCGCCGACTCTGAAATTAACCTCCAACACCAACCCTCTTCCTCTTCTTTTCAAATCACTGATCTCTCCAGGGTTTCCTCTGTTGTCTCTAAGCCCTCTTCTGGCTCCAAGAGAAAGTGCGGCTCTGAAAATTTGGGCTCTGGGAAGTGCGGCGAATCCTCCGGTGGTCGATGCCATTGCTCCAAGAAGAGAAAAATGAGGTTCAAAAGAGTGGTGAGAGTTCCAGCTATTAGCTCAAAGAACGCTGATATCCCTCCTGATGATTATTCATGGAGGAAGTATGGACAGAAGCCAATAAAGGGTTCTCCATATCCAAGAGGTTACTATAAATGCAGCAGTTTAAGAGGATGCCCTGCTAGAAAACATGTGGAGAGAGCTTCAGATGATCCATCTATGTTAATAGTGACATATGAAGGCGATCATAATCACTCTCAATCAGTGGCAGAGGCCTCAAGTCTCATCCTTGAATCATGGTGA 837 50.3 MAVELLSAYTNAHLSAAMDQDSAVHEAASGIHTLKKLISLLSHSPPSNLDSDCQAVANAAVSHFKKAISLLGHSPRTGHARFRRAPLDSSQIYNATPIQQIPPPPLESATTINFSHSSFPAADSEINLQHQPSSSSFQITDLSRVSSVVSKPSSGSKRKCGSENLGSGKCGESSGGRCHCSKKRKMRFKRVVRVPAISSKNADIPPDDYSWRKYGQKPIKGSPYPRGYYKCSSLRGCPARKHVERASDDPSMLIVTYEGDHNHSQSVAEASSLILESW 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8145093 8147260 + Cp4.1LG05g11790.1 Cpe05g01181 470386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01181 278 Pfam WRKY DNA -binding domain 207 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe05g01181 278 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 107 277 IPR044810 GO:0003700
Cpe05g01181 278 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 93 IPR044810 GO:0003700
Cpe05g01181 278 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 107 277 - -
Cpe05g01181 278 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 17 93 - -
Cpe05g01181 278 Pfam Plant zinc cluster domain 157 203 IPR018872 -
Cpe05g01181 278 ProSiteProfiles WRKY domain profile. 200 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe05g01181 278 SUPERFAMILY WRKY DNA-binding domain 201 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe05g01181 278 MobiDBLite consensus disorder prediction 148 167 - -
Cpe05g01181 278 SMART WRKY_cls 205 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe05g01181 278 Gene3D WRKY domain 189 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01181 Cpe16g00153 CCT
Cpe05g01181 Cpe16g00153 ECH
Cpe05g01181 Cpe10g00447 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01181 Cpe-Chr5:8145093 Cpe16g00153 Cpe-Chr16:3563077 1.05E-175 dispersed
Cpe17g00877 Cpe-Chr17:6822550 Cpe05g01181 Cpe-Chr5:8145093 7.11E-55 dispersed
Cpe17g01022 Cpe-Chr17:7738539 Cpe05g01181 Cpe-Chr5:8145093 1.83E-20 dispersed
Cpe10g00447 Cpe-Chr10:2618206 Cpe05g01181 Cpe-Chr5:8145093 8.69E-98 wgd
Cpe16g00152 Cpe-Chr16:3550772 Cpe05g01181 Cpe-Chr5:8145093 1.09E-163 wgd
Cpe19g00635 Cpe-Chr19:5145825 Cpe05g01181 Cpe-Chr5:8145093 1.14E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49580 PF03106 WRKY 2.30E-26 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01181 - - bhj:120089490 478.404