Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe05g01181 | ATGGCGGTGGAGCTTCTCTCAGCCTACACCAACGCCCATCTCTCCGCCGCAATGGACCAAGACTCCGCCGTCCATGAAGCCGCCTCCGGTATCCACACCCTCAAAAAGCTCATCTCATTACTCTCCCACTCCCCACCTTCTAACCTCGACTCCGATTGCCAAGCCGTTGCTAACGCCGCCGTCTCCCATTTCAAAAAGGCCATTTCTCTCCTCGGCCACTCCCCTCGTACCGGACACGCTCGATTCCGCCGCGCCCCTTTAGATTCCTCTCAAATTTACAACGCAACCCCCATTCAGCAAATCCCTCCGCCGCCTCTCGAATCAGCCACCACCATTAATTTCTCTCATTCCTCGTTTCCCGCCGCCGACTCTGAAATTAACCTCCAACACCAACCCTCTTCCTCTTCTTTTCAAATCACTGATCTCTCCAGGGTTTCCTCTGTTGTCTCTAAGCCCTCTTCTGGCTCCAAGAGAAAGTGCGGCTCTGAAAATTTGGGCTCTGGGAAGTGCGGCGAATCCTCCGGTGGTCGATGCCATTGCTCCAAGAAGAGAAAAATGAGGTTCAAAAGAGTGGTGAGAGTTCCAGCTATTAGCTCAAAGAACGCTGATATCCCTCCTGATGATTATTCATGGAGGAAGTATGGACAGAAGCCAATAAAGGGTTCTCCATATCCAAGAGGTTACTATAAATGCAGCAGTTTAAGAGGATGCCCTGCTAGAAAACATGTGGAGAGAGCTTCAGATGATCCATCTATGTTAATAGTGACATATGAAGGCGATCATAATCACTCTCAATCAGTGGCAGAGGCCTCAAGTCTCATCCTTGAATCATGGTGA | 837 | 50.3 | MAVELLSAYTNAHLSAAMDQDSAVHEAASGIHTLKKLISLLSHSPPSNLDSDCQAVANAAVSHFKKAISLLGHSPRTGHARFRRAPLDSSQIYNATPIQQIPPPPLESATTINFSHSSFPAADSEINLQHQPSSSSFQITDLSRVSSVVSKPSSGSKRKCGSENLGSGKCGESSGGRCHCSKKRKMRFKRVVRVPAISSKNADIPPDDYSWRKYGQKPIKGSPYPRGYYKCSSLRGCPARKHVERASDDPSMLIVTYEGDHNHSQSVAEASSLILESW | 278 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 8145093 | 8147260 | + | Cp4.1LG05g11790.1 | Cpe05g01181 | 470386 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe05g01181 | 278 | Pfam | WRKY DNA -binding domain | 207 | 263 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe05g01181 | 278 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 107 | 277 | IPR044810 | GO:0003700 | |
Cpe05g01181 | 278 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 17 | 93 | IPR044810 | GO:0003700 | |
Cpe05g01181 | 278 | PANTHER | WRKY TRANSCRIPTION FACTOR 7-RELATED | 107 | 277 | - | - | |
Cpe05g01181 | 278 | PANTHER | WRKY TRANSCRIPTION FACTOR 7-RELATED | 17 | 93 | - | - | |
Cpe05g01181 | 278 | Pfam | Plant zinc cluster domain | 157 | 203 | IPR018872 | - | |
Cpe05g01181 | 278 | ProSiteProfiles | WRKY domain profile. | 200 | 266 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe05g01181 | 278 | SUPERFAMILY | WRKY DNA-binding domain | 201 | 265 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe05g01181 | 278 | MobiDBLite | consensus disorder prediction | 148 | 167 | - | - | |
Cpe05g01181 | 278 | SMART | WRKY_cls | 205 | 265 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe05g01181 | 278 | Gene3D | WRKY domain | 189 | 266 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe05g01181 | Cpe16g00153 | CCT | |
Cpe05g01181 | Cpe16g00153 | ECH | |
Cpe05g01181 | Cpe10g00447 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g01181 | Cpe-Chr5:8145093 | Cpe16g00153 | Cpe-Chr16:3563077 | 1.05E-175 | dispersed | |
Cpe17g00877 | Cpe-Chr17:6822550 | Cpe05g01181 | Cpe-Chr5:8145093 | 7.11E-55 | dispersed | |
Cpe17g01022 | Cpe-Chr17:7738539 | Cpe05g01181 | Cpe-Chr5:8145093 | 1.83E-20 | dispersed | |
Cpe10g00447 | Cpe-Chr10:2618206 | Cpe05g01181 | Cpe-Chr5:8145093 | 8.69E-98 | wgd | |
Cpe16g00152 | Cpe-Chr16:3550772 | Cpe05g01181 | Cpe-Chr5:8145093 | 1.09E-163 | wgd | |
Cpe19g00635 | Cpe-Chr19:5145825 | Cpe05g01181 | Cpe-Chr5:8145093 | 1.14E-07 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49580 | PF03106 | WRKY | 2.30E-26 | CL0274 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe05g01181 | - | - | bhj:120089490 | 478.404 |