Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01196 ATGGACACTCTCTTTGTCCCCATCACCTTCTCCAAACCTATTCATTCTTTACTCACCCGCACCACCAACGCCGGAGCTCGATCCAGGATCGGACCTGTTTCCTGCTTCTCCCTGCGTTCTTCTGTAATTCGGCTCAAGCGCTTCCGTTGCGCTGCCGATGCCTCCGATCACCGGCACGGCCACCACCACCACCACCACCATAGCTGTCAGCACCATTGCGGTGGTGACGGTGATGGAGTGGAGTTGACTGGAGCTCAGAAGGCGTTTGTTCGATTTGCCAAAGCTATTAGGTGGACGGACTTGGCGAATTATTTGAGGGAGCATCTACACTTGTGTTGCGGTTCTGCTGCTTTGTTTATCACTGCGGCTGCATGTCCTTATTTGGTGCCTAAACCTGCTGTGAAGCCTCTACAGAATGTTTTCATTGCTGTTGCTTTCCCTTTAGTCGGGGTCTCTGCTTCTCTTGATGCTCTTACTGATATAAGTGGTGGGAAAGTAAACATCCATGTACTAATGGCCCTTGCAGCCTTTGCATCAATATTTATGGGGAACCCCTTGGAGGGAGGACTACTTCTTGTGATGTTTAATCTGGCTCATATTGCTGAAGAGTATTTCACAAAGCAATCAATGACTGACGTTAAAGAGTTGAAGGAAAGTCATCCAGATTTTGCCCTTGTTCTGGATATGAATGATGATAACCTTCCTGATACTTCAGATCTGGAGCATCGAAAGGTGCCCGTGCGTGATATTGAAGTGGGCTCATATATCATGGTGGGAGCTGGTGAGTCTGTCCCCGTAGATTGTGAGGTTTATCATGGTTGTGCTACGATCACTGTTGAGCACTTAACAGGAGAAATCAAACCATTGCAAATAAAGGTCGGGCAAAGAGTACCAGGTGGAGCAAGAAATTTGGACGGTAGGATCATAGTGAAGGCTACAAAAACATGGGAAGAGTCAACACTTAGCAGGATTGTGCAGTTGACTGAAGAAGCACAACTTAATAAACCAAAGCTACAGAGGTGGCTTGATGAATTTGGTGAGAATTACAGCAAAGTGGTTGTAGTTTTATCTGTGGCTGTTGCCCTCATTGGACCATTATTGTTCAAGTGGCCCTTTATTTGCACACCAGGTTTCAGAGGATCAGTTTATAGAGCACTTGGGTTCATGGTAGCCGCATCACCATGTGCACTGGCTGCAGCTCCATTGGCATACGCTATTGCAATAAGTTCATGTGCAAGAAAGGGTATACTCCTGAAAGGTGGACATGTGCTTGATGCTATGGCTTCTTGTCACACCGTTGCATTTGATAAAACCGGGACATTGACTACAGGAGGACTTGTATTTAAAGCCATAGAACCCATTTATGGGCATAAGATTGGAGGCGATAATTCACATTTGGCTTCCTGTTGCATACCCAGCTGTGAAAAAGAAGCCCTTGCCGTTGCAGCTGCCATGGAAAAGGGTACTACTCACCCAATTGGAAGAGCTGTTGTAGATCATAGTGTGGGGAAAAACCTTCCTTCTATTTCTGTTGAAAGTTTCGAATATTTCCCTGGAAGAGGTCTCATCGCAACTTTGCATGGCATTAAGTCAGGAATTGGAGGTAAATTGCGGAAAGCATCCCTTGGTTCTGTGGATTTCATCACTTCCTTTTGCAAGTCCGAAAACGAATCAAGGAAGATCAAGGAAGCTGTTCGAGCATCATCATATGGAAGCGAATTTGTTCATGCGGCTCTTTCAGTTGATCAGAAGGTAACACTGATTCACCTCGAGGATCAGCCTCGAGCTGGCGTCTTAGATGCAATAGCAGAACTACAAGATCAGGCGAATCTCCGTGTTATGATGTTAACTGGTGATCATGATTCAAGTGCATGGAAAATTGCAAATGCTGTGGGAATAAATGAAGTTTACTACAGTCTTAAGCCTGAGGATAAACTTGCTCATGTGAAGGAAATTTCGAGAGAGAAGGGTGGTGGTCTGATCATGGTAGGCGAAGGTATAAACGATGCACCTGCACTTGCTGCAGCTACTGTAGGAATAGTTCTTGCCTGTCGTGCAAGCGCAACTGCTACAGCTGTCGCGGATGTCCTTCTTCTTCAAGATAGTATTTCCGGTGTTCCATTCTGTATTGCCAAATCTCGTCAGACGACTGCGCTGGTCAAGCAAAATGTTACCCTTGCCTTGTCGTCTATCCTTTTAGCCTCTCTCCCATCCATTTTGGGGTTTCTTCCCTTGTGGCTAACGGTCCTTCTACACGAGGGTGGCACTCTCCTGGTCTGCCTGAACTCCATTCGTGCCCTAAATCATCCCTCATGGTCATGGAAGCAAGATTTTCAAAATCTGATCCACAACGCCAGATCTAGTCTGCACACAACACCCGAACCTAGCTCAGGTACCATCCGAACTGCATCGTCATAA 2418 46.28 MDTLFVPITFSKPIHSLLTRTTNAGARSRIGPVSCFSLRSSVIRLKRFRCAADASDHRHGHHHHHHHSCQHHCGGDGDGVELTGAQKAFVRFAKAIRWTDLANYLREHLHLCCGSAALFITAAACPYLVPKPAVKPLQNVFIAVAFPLVGVSASLDALTDISGGKVNIHVLMALAAFASIFMGNPLEGGLLLVMFNLAHIAEEYFTKQSMTDVKELKESHPDFALVLDMNDDNLPDTSDLEHRKVPVRDIEVGSYIMVGAGESVPVDCEVYHGCATITVEHLTGEIKPLQIKVGQRVPGGARNLDGRIIVKATKTWEESTLSRIVQLTEEAQLNKPKLQRWLDEFGENYSKVVVVLSVAVALIGPLLFKWPFICTPGFRGSVYRALGFMVAASPCALAAAPLAYAIAISSCARKGILLKGGHVLDAMASCHTVAFDKTGTLTTGGLVFKAIEPIYGHKIGGDNSHLASCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKNLPSISVESFEYFPGRGLIATLHGIKSGIGGKLRKASLGSVDFITSFCKSENESRKIKEAVRASSYGSEFVHAALSVDQKVTLIHLEDQPRAGVLDAIAELQDQANLRVMMLTGDHDSSAWKIANAVGINEVYYSLKPEDKLAHVKEISREKGGGLIMVGEGINDAPALAAATVGIVLACRASATATAVADVLLLQDSISGVPFCIAKSRQTTALVKQNVTLALSSILLASLPSILGFLPLWLTVLLHEGGTLLVCLNSIRALNHPSWSWKQDFQNLIHNARSSLHTTPEPSSGTIRTASS 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8285892 8295884 - Cp4.1LG05g11960.1 Cpe05g01196 470401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01196 805 Gene3D - 427 714 IPR023214 -
Cpe05g01196 805 Pfam haloacid dehalogenase-like hydrolase 432 676 - -
Cpe05g01196 805 SFLD p-type atpase 416 716 IPR044492 -
Cpe05g01196 805 SUPERFAMILY Calcium ATPase, transmembrane domain M 170 747 IPR023298 -
Cpe05g01196 805 Gene3D - 445 594 IPR023299 GO:0000166
Cpe05g01196 805 Gene3D - 206 332 - -
Cpe05g01196 805 SUPERFAMILY HAD-like 432 763 IPR036412 -
Cpe05g01196 805 ProSitePatterns E1-E2 ATPases phosphorylation site. 436 442 IPR018303 -
Cpe05g01196 805 SFLD Haloacid Dehalogenase 416 716 - -
Cpe05g01196 805 Pfam E1-E2 ATPase 241 414 - -
Cpe05g01196 805 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 242 455 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe05g01196 805 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 564 743 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe05g01196 805 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 168 765 IPR027256 GO:0006812|GO:0016021|GO:0019829
Cpe05g01196 805 PRINTS P-type cation-transporting ATPase superfamily signature 434 448 - -
Cpe05g01196 805 PRINTS P-type cation-transporting ATPase superfamily signature 586 597 - -
Cpe05g01196 805 PRINTS P-type cation-transporting ATPase superfamily signature 609 619 - -
Cpe05g01196 805 PRINTS P-type cation-transporting ATPase superfamily signature 663 682 - -
Cpe05g01196 805 PRINTS P-type cation-transporting ATPase superfamily signature 687 699 - -
Cpe05g01196 805 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 27 790 - -
Cpe05g01196 805 SUPERFAMILY Calcium ATPase, transduction domain A 242 327 IPR008250 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01177 Cpe-Chr5:8092436 Cpe05g01196 Cpe-Chr5:8285892 3.19E-91 dispersed
Cpe05g01196 Cpe-Chr5:8285892 Cpe19g00213 Cpe-Chr19:1745088 2.46E-48 dispersed
Cpe05g01196 Cpe-Chr5:8285892 Cpe18g00631 Cpe-Chr18:6534383 9.79E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01196 K01534 - csv:101221102 1385.93