Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01213 ATGGCTACTTCCTCGCATGTGTTTTCAATGTCATGTCGTCTCCTTTTGGTTGTCGTTCTTCTTCTTTACTTTCTTGTTGGCTCTATCGACTCGGTTTCTTTCAAAATCGATCGGTTTAAAACCAATGAAACTGATACTCTTTACCAAGGAGATGCTATGCCATCGGTTGGAGCTGTTGAATTCAACGATGTTGAGTATCTTTGTCATGTTGGTTGGGCTATCTATGAAGACATTGTCCCAATTTGGGACTCAAAAACAGGACAAGCCACTGATTTCTCCACCCATTTTAGCTTCATTATTGATACCACAATTGTGCAAAATTATGGCAATGGATTAGCTTTCTTTTTAGCTCCACCAGGGTTTCAAATCCCTCCAAACTCAGCTGGTGGGTTTCTTGGCCTTTACAACACAACAAATAGTGATTCAACCCTCAACCAAATTGTTCATGTTGAATTTGATTCTTTCTCCAATGAAGAATGGGATCCTCCATTTGAACATGTGGGTATCAACGTTAACTCCATTCATTCTTCGAATTCCACGCGTTGGAATGCTAGTTTGCATAGTGGGGATATGGCTGATGTGTGGATCTCCTACAATTCAACCACCAAGAACTTGAGCGTGTCCTGGAAATACCAAAATTCTTCGTCTACTTCCTTTGAAAATACCACCTTGAGCTACCATATTGATCTTACGAAGGTTCTTCCTCAATGGGCTACCGTGGGGTTTTCAGCTGCAACGGGCTTGAATGTAGAGAGACACACATTATTCTCTTGGGAGTTCAATTCAAGCTTGGATTTAGAGAAAGGAAGTGAAGATAACGGGAATAAAGTCGATATAATTGTCGGTGTAACCGTGTCGATAGGAGTATCAATCATCATGGGAATTGTAGCATTTGTTGTAGTTTGGAGATTGAAACAAAAGAAACGAAAATTAGAAGAAGAAAATGGGAACGAGGTGAACTTGACATCGATTAACGATGATTTGGAGAGAGGAGCTGGACCGAGGCGGTTTTCTCGCAAGCTTCTCGCCATGGCTACCAACAATTTCTCGAACGAAAGGAAGTTGGGTGAGGGAGGGTTTGGTGCAGTGTATAGAGGATATATTCCTGATCTTGGTTTGACGATCGCGGTGAAGAAGATCTCGAGGGGTTCGAGACAGGGACGAAAAGAATACATAACGGAGGTTCTTATGGGTGTGGATGAGAAATTGCAAAGTGATTACGATAGAAAACAAATGGAGTGTTTGATGATTGTTGGGCTTTGGAGTGCTTATCCGGACCCTAATCTTAGACCTTCAATACGACAAGTGATTCAAGCTCTTAACTTTGAGACGACAATGCCAAGTCTTCCAGATAAAATGCCAGTTGCTGTGTATTATGCTCCTTCCACATCGATGAGCTCAAATGAGCCTCCAATTACATCGAGTCTTGACATGGGTCGTTGA 1443 41.93 MATSSHVFSMSCRLLLVVVLLLYFLVGSIDSVSFKIDRFKTNETDTLYQGDAMPSVGAVEFNDVEYLCHVGWAIYEDIVPIWDSKTGQATDFSTHFSFIIDTTIVQNYGNGLAFFLAPPGFQIPPNSAGGFLGLYNTTNSDSTLNQIVHVEFDSFSNEEWDPPFEHVGINVNSIHSSNSTRWNASLHSGDMADVWISYNSTTKNLSVSWKYQNSSSTSFENTTLSYHIDLTKVLPQWATVGFSAATGLNVERHTLFSWEFNSSLDLEKGSEDNGNKVDIIVGVTVSIGVSIIMGIVAFVVVWRLKQKKRKLEEENGNEVNLTSINDDLERGAGPRRFSRKLLAMATNNFSNERKLGEGGFGAVYRGYIPDLGLTIAVKKISRGSRQGRKEYITEVLMGVDEKLQSDYDRKQMECLMIVGLWSAYPDPNLRPSIRQVIQALNFETTMPSLPDKMPVAVYYAPSTSMSSNEPPITSSLDMGR 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8472708 8474684 - Cp4.1LG05g12190.1 Cpe05g01213 470418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01213 480 CDD lectin_legume_LecRK_Arcelin_ConA 32 264 IPR001220 GO:0030246
Cpe05g01213 480 ProSitePatterns Protein kinases ATP-binding region signature. 355 379 IPR017441 GO:0005524
Cpe05g01213 480 SUPERFAMILY Protein kinase-like (PK-like) 330 396 IPR011009 -
Cpe05g01213 480 PANTHER PUTATIVE-RELATED 397 480 - -
Cpe05g01213 480 PANTHER PUTATIVE-RELATED 22 395 - -
Cpe05g01213 480 PANTHER - 397 480 - -
Cpe05g01213 480 PANTHER - 22 395 - -
Cpe05g01213 480 Pfam Legume lectin domain 32 268 IPR001220 GO:0030246
Cpe05g01213 480 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 264 IPR013320 -
Cpe05g01213 480 Gene3D Phosphorylase Kinase; domain 1 334 404 - -
Cpe05g01213 480 Gene3D - 29 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01213 Cpe-Chr5:8472708 Cpe14g00635 Cpe-Chr14:4083994 5.55E-91 dispersed
Cpe05g01212 Cpe-Chr5:8468467 Cpe05g01213 Cpe-Chr5:8472708 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01213 - - csv:101203101 615.92