Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01223 ATGATAATTCGAGATCATATTTGGGAGGCGGTGCAAAATGACACGAGAATTGCTGCATCGCTACTACGAGATGGCTTAAAAGCAAACTTCAAATCCGTTCTAGAACAACTCCCATCTCCGAGGGCATCTCTAGAGAATAACACCGCCAAGTTCACCTCAAAGGGCCTCGATTTAAAGGACCTCGTCGTGCTATCAGGCGCACACACTATCGGCTTCGCTCGTTGCGTGACATTCAAGGTCCGTCTCTTCAACTACAAGGGCTCCGGCCAGCCCGACCCTGACATCAACGCAGCCATGCTCTCGGACTTGCAATCCATGTGCCCCAACAGAAACGACGGAACCAACGCCAATTTGGCCCCTCTGGATGTGGCCACTGTTGACAGGTTCGACAATGAGTATTACACGAACTTGATTAGTGGTGTGGGGCTTTTGGAGTCCGACCATGGTCTAATGGCCGACAGCAACACAGCTCAAATGGTTAGACAATATAGTTTTGATACGAACTTGTTTTATGATGACTTTGCTGAGTCGATGTTTAGGATGAACATGGTTGGTGTTTTGAGTGGCCGTGACGGGCAGATTCGAAAGAATTGTCACGTTGTTAATGTCGATGATGGGTAT 621 48.31 MIIRDHIWEAVQNDTRIAASLLRDGLKANFKSVLEQLPSPRASLENNTAKFTSKGLDLKDLVVLSGAHTIGFARCVTFKVRLFNYKGSGQPDPDINAAMLSDLQSMCPNRNDGTNANLAPLDVATVDRFDNEYYTNLISGVGLLESDHGLMADSNTAQMVRQYSFDTNLFYDDFAESMFRMNMVGVLSGRDGQIRKNCHVVNVDDGY 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8570302 8571736 - Cp4.1LG05g12350.1 Cpe05g01223 470428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01223 207 PANTHER PEROXIDASE 72-RELATED 23 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01223 207 Pfam Peroxidase 23 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g01223 207 PRINTS Plant peroxidase signature 120 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01223 207 PRINTS Plant peroxidase signature 176 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01223 207 PRINTS Plant peroxidase signature 59 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01223 207 PRINTS Plant peroxidase signature 136 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01223 207 PRINTS Haem peroxidase superfamily signature 60 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g01223 207 PRINTS Haem peroxidase superfamily signature 122 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g01223 207 ProSitePatterns Peroxidases proximal heme-ligand signature. 60 70 IPR019793 -
Cpe05g01223 207 Gene3D - 23 202 - -
Cpe05g01223 207 PANTHER PEROXIDASE 10 23 201 - -
Cpe05g01223 207 SUPERFAMILY Heme-dependent peroxidases 23 202 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe05g01223 207 ProSiteProfiles Plant heme peroxidase family profile. 1 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g01223 207 Gene3D Peroxidase, domain 2 38 181 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01223 Cpe-Chr5:8570302 Cpe10g00426 Cpe-Chr10:2482905 2.56E-63 dispersed
Cpe05g01223 Cpe-Chr5:8570302 Cpe05g01207 Cpe-Chr5:8417240 3.60E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01223 K00430 - csv:101209504 311.227