Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01252 ATGTCTGATTCATCGGATTCTCCGTCTCCTTCTTCCGAATCGGATTCGGATTCTGGTTCCTCTCCTCCGCCTCCGTCTGATTCTTCTCCACCTACGCCCGAGTCCTCTCCGCCACCGCCGCCGGATGTTTCTCCGCCTCCTCCGACTGGTTCATCTCCACCTCCACCGAGTGCATCACCGCCGCCGCCGAATGACTCAAAGTCTTCATCTCCTCCATCTCCTACATCTCCTCCTCCTCCTCCTCCACCGCCGCCACCTCCTCCGCCTTCTCCTCCACCTCCTGGATCCTCCAGGCATACTTCTCCGCCGAAATCGATCTCCTCCTCGCCTCATTCCCGATCCTCAGACTCCTCATCCGGCGACTCTACGCCTGAGGTGGTTCCGATTATCGTAGGAGTGGCGGTGGCGGCAGGTTTTTTGCTATTCGCCATGGCACTGATATTCTTCGCTTGCAGCCGAAAGAAAAAGAAGCGAGAGAGTAATGCCGTATACTACGATGATCGACCTAATCAGAAAGGTGGGGACCCCTATTACAACGGAAGGAATCAGAACTGGAACGGTACGGGCGAACATTTCGTGAACATTCCGCCAGCCACCGGCGGAGGGCAAGGAGGAGGATGGCCACCGCCAGCCACCGGCGGTGGGCAAGGAGGAGCATGGCCACCGCCAGCCACCGGCGGAGGGCAAGGAGGAGCATGGCCACCGCCAGCCACCGGGGGAGGGCAAGGAGGAGCATGGCCACCGCCAGCCACCGGCGGAGGGCAAGGAGGAGTATGGCCACCGCCGCCGCCACCACCGGGATTATTAAGCAGCGACATGAGCTCAAGCTTCTCAGGGCCACATGGGCCACCGTTACCACCGCCACACCCGTCGGTGGCGCTGGGGTTCAATAAAAACACGTTCACATTCGACGAGCTGATGGCAGCCACAGGCGGATTCTCTCCGGCGAACTTGTTGGGCCAAGGCGGATTCGGATACGTTCATAAAGGAGTGCTGCCCAACGGCAAGGAAATTGCCGTAAAAAGCCTTAAAACGGGTAGCGGACAAGGTGATCGGGAATTCGCGGCGGAAGTAGAGATTATCAGCCGCGTCCACCACCGTCATTTGGTGTCCCTCGTCGGTTATTGCATGACCAATGATCGGAAGATGTTGGTCTACGAATTTGTTCCTAATAACAACCTCGATTTCCACCTCCACGGGGAGGGGCGCCCACCGATGCCGTGGTCGATGAGGGTCAAGATCGCACTCGGTGCAGCTAAGGGTCTGTCCTACCTCCACGAAGACTGTCATCCTCGCATCATCCATAGAGACATTAAGACGGCAAATATTCTTATAGACATGAGTTTTGAAGCAAAGGTGGCTGATTTTGGATTGGCTAAGCTCAACCAGGACAATTACACTCATGTATCCACTCGGGTTATGGGCACATTTGGTTATTTGGCTCCCGAGTATGCATCAAGTGGGAAGCTAACAGAGAAATCAGACGTATTTTCATACGGAGTAATGCTTTTGGAGATCATAACTGGAAGACGACCCGTGGACGCATCGGGGGAGCTGATGGAGGACAGCTTAGTGGATTGGGCGAGACCTCTATGCTTGAAAGCAATGACTGAAGGAGCCTACGAGGCGTTGGCAGATCCAAGATTGGAGAAGGACTACGACGCTCAGGAAATGGCATGCATGGTGGCTTGTGCTGCTGCATGCATTCGCCATTCTGCTAAACGCCGTCCCAAAATGAGCCAAGTTGTGCGGGCACTCGAAGGCGACGTATCGATGGAGGATTTGAACGACGGAGTAAAGCCAGGGCAAAGCTCATACTTCGGCTCCGGTACGTCGTCGGATTACGACGCAAGCTCTTACAGCGCCGACATGAAAAGGTTCAGAAAGGTAGCGTTGGAAAGCCGGGAGTACACTAGCAGTGATTATGGTGGGACGAGCGAGTATGGGCTAAACCCATCAGCGACGAGCAGTGACAATAGTCAGAAGCCAAGCCAAGCGTCGTCGCCCAATTTACAGCCCAACAAACCCTAA 2031 55.44 MSDSSDSPSPSSESDSDSGSSPPPPSDSSPPTPESSPPPPPDVSPPPPTGSSPPPPSASPPPPNDSKSSSPPSPTSPPPPPPPPPPPPPSPPPPGSSRHTSPPKSISSSPHSRSSDSSSGDSTPEVVPIIVGVAVAAGFLLFAMALIFFACSRKKKKRESNAVYYDDRPNQKGGDPYYNGRNQNWNGTGEHFVNIPPATGGGQGGGWPPPATGGGQGGAWPPPATGGGQGGAWPPPATGGGQGGAWPPPATGGGQGGVWPPPPPPPGLLSSDMSSSFSGPHGPPLPPPHPSVALGFNKNTFTFDELMAATGGFSPANLLGQGGFGYVHKGVLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCMTNDRKMLVYEFVPNNNLDFHLHGEGRPPMPWSMRVKIALGAAKGLSYLHEDCHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLEIITGRRPVDASGELMEDSLVDWARPLCLKAMTEGAYEALADPRLEKDYDAQEMACMVACAAACIRHSAKRRPKMSQVVRALEGDVSMEDLNDGVKPGQSSYFGSGTSSDYDASSYSADMKRFRKVALESREYTSSDYGGTSEYGLNPSATSSDNSQKPSQASSPNLQPNKP 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8763463 8766590 + Cp4.1LG05g12540.1 Cpe05g01252 470457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01252 676 MobiDBLite consensus disorder prediction 176 190 - -
Cpe05g01252 676 MobiDBLite consensus disorder prediction 1 22 - -
Cpe05g01252 676 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Cpe05g01252 676 Pfam Protein tyrosine and serine/threonine kinase 318 586 IPR001245 GO:0004672|GO:0006468
Cpe05g01252 676 ProSiteProfiles Protein kinase domain profile. 313 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01252 676 MobiDBLite consensus disorder prediction 636 676 - -
Cpe05g01252 676 SMART serkin_6 313 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01252 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Cpe05g01252 676 MobiDBLite consensus disorder prediction 1 123 - -
Cpe05g01252 676 Gene3D Transferase(Phosphotransferase) domain 1 389 599 - -
Cpe05g01252 676 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 7 644 - -
Cpe05g01252 676 Gene3D Phosphorylase Kinase; domain 1 291 388 - -
Cpe05g01252 676 MobiDBLite consensus disorder prediction 602 618 - -
Cpe05g01252 676 MobiDBLite consensus disorder prediction 638 676 - -
Cpe05g01252 676 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 7 644 - -
Cpe05g01252 676 MobiDBLite consensus disorder prediction 158 286 - -
Cpe05g01252 676 SUPERFAMILY Protein kinase-like (PK-like) 288 586 IPR011009 -
Cpe05g01252 676 PRINTS Proline rich extensin signature 67 92 - -
Cpe05g01252 676 PRINTS Proline rich extensin signature 3 24 - -
Cpe05g01252 676 PRINTS Proline rich extensin signature 44 61 - -
Cpe05g01252 676 PRINTS Proline rich extensin signature 24 40 - -
Cpe05g01252 676 MobiDBLite consensus disorder prediction 254 269 - -
Cpe05g01252 676 MobiDBLite consensus disorder prediction 100 123 - -
Cpe05g01252 676 MobiDBLite consensus disorder prediction 23 99 - -
Cpe05g01252 676 MobiDBLite consensus disorder prediction 593 618 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02090 Cpe-Chr1:17701846 Cpe05g01252 Cpe-Chr5:8763463 2.04E-65 dispersed
Cpe04g01128 Cpe-Chr4:9750604 Cpe05g01252 Cpe-Chr5:8763463 4.79E-154 dispersed
Cpe05g01252 Cpe-Chr5:8763463 Cpe18g00431 Cpe-Chr18:5399968 2.14E-162 dispersed
Cpe07g00185 Cpe-Chr7:1163171 Cpe05g01252 Cpe-Chr5:8763463 1.63E-53 dispersed
Cpe09g00257 Cpe-Chr9:1497415 Cpe05g01252 Cpe-Chr5:8763463 8.23E-81 dispersed
Cpe01g00667 Cpe-Chr1:3898590 Cpe05g01252 Cpe-Chr5:8763463 1.02E-170 transposed
Cpe10g00378 Cpe-Chr10:2229585 Cpe05g01252 Cpe-Chr5:8763463 1.16E-35 wgd
Cpe16g00234 Cpe-Chr16:4427342 Cpe05g01252 Cpe-Chr5:8763463 2.93E-26 wgd
Cpe05g01252 Cpe-Chr5:8763463 Cpe06g00130 Cpe-Chr6:641243 3.64E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62440 PF07714 PK_Tyr_Ser-Thr 3.70E-47 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01252 - - csv:101217306 670.618