Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01315 ATGGCGGCTACTATGTCACCGTGGGGCAAGCCTGGAGCTTGGGCTCTGGATGCGGAGGAGCATGAGGCCGAGCTTCTCAAGGATCAGCAGGAGCAATCCCGTTCGCAATCGGAGCCCAGTGCCGACTTTCCGTCTCTCGCCGCCGCGGCTGCCACCAAGCCTAAGAAGAAGAAAGGTCAGTCCATTCCTCTCTCGGAGTTTCATACCTATGGTGGTCCTAAGCCGTCGGCTCAATCCAGTGAGCCGAAGGGTCTTACGACCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGCGAACGGAGGAGGAACTGGACCGCAATCGGCTCGGAGGTGGTTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGATTCGTCGAATGCTCGACGCGGTTCTAGGGTTTTTGATGAGTCGAGGAGGAGTGGTGATGGATCCGATAGGGAGTTTGGAAGGGAGTCGTTGCCTTCTAGGGCTGATGAGATTGATGATTGGGGCGCTGGGAAGAAGCCTATGATGGGCAATGGCTTTGAGAGGAGAGACAGAGGAGGAGGAGGAGGCTTTTTCGATTCGCATTCATCGAAAGCGGACGAATCGGATAGTTGGGTGTCGAATAAAAGCTTTTCACCTTCTGATGGTCGGAGATCAGGCGGTAGAGGTGGTGGATTTGAGAGAGAGCGAAGAGTAGGCTTTCCCTCGAACGGTGGTGGCGCCGATTCAGACAATTGGGACCGAAAATCTGAAGGTTCCAGGGGTAGAATTGGTGAGAATGGTGGTGGGGCTGATTCAGATAGCTGGGGAAAAAGATCTGAAGCAGCCAGAGGTGGAATTAGTGAGCGGCCGAGGCTTAATCTACAGCCTCGTTCACTCCCTTTGAACAATGGGAATCAGGAGGCTTCTGGTGCCGCAGTGAAGCTAAAGGCTTCCAATCCTTTTGGAAATGCTAGACCAAGGGAACAAGTATTGGCTGACAAGGGACAGGACTGGAAGAAAATTGATGAGAAGCTCGAGTCAATGAAAATTAAGGACACGGTTGTGAGAGCTGAGAGATCTAGTGGGGCTTCCTTCGAGAGAAAAGGCTTTGGAAGTCGAAATGCTTGGTCTCCCCAAGATCGTTCAGGGAGCGCATGGAGGAGGTCAGAATCTGTGGAGTCTCGTCCCCAGAGTGCTGAGGCGGTTGATGTTGGACCTGCTGAGGAAAACTGA 1233 52.8 MAATMSPWGKPGAWALDAEEHEAELLKDQQEQSRSQSEPSADFPSLAAAAATKPKKKKGQSIPLSEFHTYGGPKPSAQSSEPKGLTTEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRGNRYSNGEDSSNARRGSRVFDESRRSGDGSDREFGRESLPSRADEIDDWGAGKKPMMGNGFERRDRGGGGGFFDSHSSKADESDSWVSNKSFSPSDGRRSGGRGGGFERERRVGFPSNGGGADSDNWDRKSEGSRGRIGENGGGADSDSWGKRSEAARGGISERPRLNLQPRSLPLNNGNQEASGAAVKLKASNPFGNARPREQVLADKGQDWKKIDEKLESMKIKDTVVRAERSSGASFERKGFGSRNAWSPQDRSGSAWRRSESVESRPQSAEAVDVGPAEEN 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9243915 9246704 + Cp4.1LG05g13070.1 Cpe05g01315 470520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01315 410 MobiDBLite consensus disorder prediction 1 330 - -
Cpe05g01315 410 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 394 - -
Cpe05g01315 410 Coils Coil 16 36 - -
Cpe05g01315 410 MobiDBLite consensus disorder prediction 375 396 - -
Cpe05g01315 410 MobiDBLite consensus disorder prediction 15 31 - -
Cpe05g01315 410 Pfam Plant specific eukaryotic initiation factor 4B 238 368 IPR010433 GO:0003743
Cpe05g01315 410 Pfam Plant specific eukaryotic initiation factor 4B 7 233 IPR010433 GO:0003743
Cpe05g01315 410 MobiDBLite consensus disorder prediction 139 176 - -
Cpe05g01315 410 MobiDBLite consensus disorder prediction 120 138 - -
Cpe05g01315 410 MobiDBLite consensus disorder prediction 355 410 - -
Cpe05g01315 410 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 394 IPR010433 GO:0003743
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00580 Cpe05g01315 CCT
Cpe05g01315 Cpe16g00301 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00580 Cpe-Chr4:6195809 Cpe05g01315 Cpe-Chr5:9243915 1.31E-109 dispersed
Cpe05g01315 Cpe-Chr5:9243915 Cpe11g00037 Cpe-Chr11:182688 6.34E-30 dispersed
Cpe16g00301 Cpe-Chr16:4947554 Cpe05g01315 Cpe-Chr5:9243915 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01315 - - csv:101214573 634.409