Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01363 ATGTTCTCAGAGTTGATGAACTTTCTGAGAGCTTGTTTTCGACCGAGGTCGAACCGACATGTCCACAAAGGTTCAGATGCTGGTGGGCGACAGGATGGTCTCCTATGGTACAAGGATAGTGGACAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAAGCTAACAATTTACTTGAAGATCAAAGCCAGATAGAGTCAGGCAATTTGAGCTTGCACGAGTCTGGGCCATATGGTACCTTTGTTGGAGTGTATGATGGGCATGGAGGGCCCGAGACGTCGCGCTATGTTAACGATCATCTTTTCCAGCATCTTAAAAGGTTTACTTCAGAGCAACAATCCATGTCAGTGGATGTCATAAGAAAGGCCTTTCAAGCTACAGAAGACGGGGTCGTTGCTCAAGTTTCGAAACAATGGTCGATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTTGGTGTAATTTGTGGTGGAACCCTTTACATTGCTAACCTTGGCGATTCACGAGCTGTTTTAGGGCGAGTCGTGAAAGCAACAGGGGAAGTTTTGTCCGTTCAGTTGTCAGCCGAGCATAATGCATCTATAGAGTCTGTTCGGCACGAGCTACGTGCTCTGCATCCTGATGACCCCCAGATTGTAGTTTTGAAGCATAATGTATGGCGCGTGAAGGGCCTTATACAGGTTAGATCGAGTCCTAAACCACATTTTACATCTCGTCGTTCTTGCAGCATGCTTCTTGTTGATTAA 753 46.48 MFSELMNFLRACFRPRSNRHVHKGSDAGGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQIESGNLSLHESGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEDGVVAQVSKQWSMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSVQLSAEHNASIESVRHELRALHPDDPQIVVLKHNVWRVKGLIQVRSSPKPHFTSRRSCSMLLVD 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9586872 9590430 - Cp4.1LG05g13710.1 Cpe05g01363 470568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01363 250 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Cpe05g01363 250 SMART PP2C_4 39 249 IPR001932 -
Cpe05g01363 250 ProSiteProfiles PPM-type phosphatase domain profile. 47 250 IPR001932 -
Cpe05g01363 250 CDD PP2Cc 48 230 IPR001932 -
Cpe05g01363 250 Gene3D - 35 238 IPR036457 -
Cpe05g01363 250 PANTHER ALPHABET, ISOFORM E-RELATED 5 233 - -
Cpe05g01363 250 Pfam Protein phosphatase 2C 77 199 IPR001932 -
Cpe05g01363 250 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 233 - -
Cpe05g01363 250 SUPERFAMILY PP2C-like 56 230 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01363 Cpe15g00605 CCT
Cpe04g00604 Cpe05g01363 CCT
Cpe05g01363 Cpe16g00325 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01363 Cpe-Chr5:9586872 Cpe10g00688 Cpe-Chr10:3957063 1.88E-138 dispersed
Cpe08g01306 Cpe-Chr8:9397628 Cpe05g01363 Cpe-Chr5:9586872 3.91E-76 dispersed
Cpe12g00327 Cpe-Chr12:2155518 Cpe05g01363 Cpe-Chr5:9586872 4.00E-87 dispersed
Cpe15g00450 Cpe-Chr15:5604206 Cpe05g01363 Cpe-Chr5:9586872 3.02E-06 dispersed
Cpe15g00605 Cpe-Chr15:6773776 Cpe05g01363 Cpe-Chr5:9586872 1.03E-139 wgd
Cpe16g00325 Cpe-Chr16:5096653 Cpe05g01363 Cpe-Chr5:9586872 2.63E-132 wgd
Cpe04g00604 Cpe-Chr4:6319570 Cpe05g01363 Cpe-Chr5:9586872 7.45E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01363 - - csv:101221640 454.136