Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01371 ATGGTATCTGATTATTCCCCCGATCAACGTGATTTGCAGTTCGCCACTAGGTTTTTGATTCATTTTATGAGGTCTCAGCCTTTTCTTCTTGCTGTAGAGCTGCGTTGGCTGATATCTATAATGGAAGACGGCGAGCTTGAATCCTCGAATCCTGAAGTGTTTTCGAGTTCGAATGCCGTTGAGTTTCTGAGTAGCTGCTCGATGGATAGCTTCTTCGATGAGATTCTTAAGGATACTCATGCTTGCACGCATGCTCATACTTGCAACCCTCCTGGTCCTGATTATTCACATACGCACACATGTTTTCATGTTCATACTAAAATTGTTTCCTCCCCTACCGAAGAAAAGGTTTCCACTGATGACACGGCGGAATCTGTGGATAAGAAGACTAAGAAACGCCCGCTAGGTAATCGCGAAGCGGTTCGTAAATACCGTGAGAAGAAGAAGGCAAGAGCTGCATCATTGGAAGATGAAGTTGTGAGATTGAGGACCTTGAATCAGCAACTGTTGAAGAGATTGCAGGGTCAGGCTGCATTGGAGGCTGAGATTTCGAGGCTCAAATGTTTGCTTGTGGATATTAGAGGAAGAATTGAAGGGGAGATTGGAACATTTCCTTATCAGAAACCAGCCAATTCAGATCTTCCCAATCAAAACATGTCTGGTAGTTACATGATAAATCCATGTAATGTGCAGTGCAATGATCAGCCGTATTGCCTTCATCCAGGGGCCGATGGGAAAAGTGGAGAGAGCGTTTTGTTGAACGGGCAAAGCTTCAGTGGCTGTGACTTTGAAAATCTTCAGTGCTCGGCTAATCAAAACACAGGAGGAACAAAGGAACTTCCTGATTGTGGATTAGGGGACGCAGTTTCTAACATCAATTGCGCCGAATTTAATCAGAAGAAAGGTGTCTATGAAAGAATCTGTCCAAGTTATGAGGAGGGGTCCGTAAGAAGTCCAGAACTGGGAAGAGCTGATCGTGGATGGTATCTGCATCCTTTCGTGTACATAATCAGCTGCGTCGGTTCCTGCTCCGTCCAGTGCAGCATCAACATCCTCTTTCAGAAACGTGACAGGACTCTATCGAAGCGGAGGACTATTGTTCCTTATCTTCCAAGTGATCCATGTCGACCAAGTCGGTTTTAA 1143 44.97 MVSDYSPDQRDLQFATRFLIHFMRSQPFLLAVELRWLISIMEDGELESSNPEVFSSSNAVEFLSSCSMDSFFDEILKDTHACTHAHTCNPPGPDYSHTHTCFHVHTKIVSSPTEEKVSTDDTAESVDKKTKKRPLGNREAVRKYREKKKARAASLEDEVVRLRTLNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGTFPYQKPANSDLPNQNMSGSYMINPCNVQCNDQPYCLHPGADGKSGESVLLNGQSFSGCDFENLQCSANQNTGGTKELPDCGLGDAVSNINCAEFNQKKGVYERICPSYEEGSVRSPELGRADRGWYLHPFVYIISCVGSCSVQCSINILFQKRDRTLSKRRTIVPYLPSDPCRPSRF 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9639800 9643629 - Cp4.1LG05g13720.1 Cpe05g01371 470576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01371 380 CDD bZIP 130 184 - -
Cpe05g01371 380 Coils Coil 138 172 - -
Cpe05g01371 380 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 127 174 IPR004827 GO:0003700|GO:0006355
Cpe05g01371 380 Gene3D - 115 193 - -
Cpe05g01371 380 MobiDBLite consensus disorder prediction 117 140 - -
Cpe05g01371 380 PANTHER BASIC LEUCINE ZIPPER 23 41 280 - -
Cpe05g01371 380 SMART brlzneu 124 192 IPR004827 GO:0003700|GO:0006355
Cpe05g01371 380 SUPERFAMILY Leucine zipper domain 129 175 IPR046347 GO:0003700|GO:0006355
Cpe05g01371 380 MobiDBLite consensus disorder prediction 113 140 - -
Cpe05g01371 380 PANTHER CCAAT/ENHANCER BINDING PROTEIN 41 280 - -
Cpe05g01371 380 Pfam Basic region leucine zipper 127 182 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00591 Cpe05g01371 CCT
Cpe05g01371 Cpe15g00593 CCT
Cpe05g01371 Cpe16g00318 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01371 Cpe-Chr5:9639800 Cpe14g00539 Cpe-Chr14:3400297 3.34E-06 dispersed
Cpe15g00593 Cpe-Chr15:6688098 Cpe05g01371 Cpe-Chr5:9639800 1.83E-134 wgd
Cpe16g00318 Cpe-Chr16:5045606 Cpe05g01371 Cpe-Chr5:9639800 2.53E-155 wgd
Cpe04g00591 Cpe-Chr4:6254361 Cpe05g01371 Cpe-Chr5:9639800 5.17E-129 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49591 PF07716 bZIP_2 8.80E-15 CL0018 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01371 K25785 - csv:101219501 477.633