Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01419 ATGCCGAGGGGTTTGAAGAGTAATTGCCAGTCTACTTCTCATCAGCTTTTGAAGGAAAAAGCAAAGAACCGTGTGAATGATCTTCAAGGGATATTCACTAATCTTCAATCTGCAAGGAAGGAGAGTCGTACTACCGATGTTGCTGTCTTGGAGGAGCAAGTGCATCAGATGCTCAGGGAGTGGAATGCCGAGCTTAATGAACCATCCCCTGCCTCTTCATTTGTTGAGGGCAGTCTTGGATCGTTCTCGCAAGAATTAGCTCGTCTTCTCGAGCATTTTGATGAGGAAGATGATGCAACTAGCACATTGGCTGAACCAAAGGTCGAGCCTGATCAACATTGCGTTCTTGCTTGCAATCCGTCCGATTTTCAGCAGCAGAGTGTTCTTGGATTTGAAGAGTGCAAAGTCAATAGTGAAGATTTCAAATTAGATCAGAACTTTGTGCAGAACTTAGTGGTCGGTATGGATGATATGTCTACTATGGATTGTCGTTTATTGGATTCGCACCAAGAGTTCGACTATGGGGCGCTTATTGGGGCGTATGATGCGGGAGACTTTAGTCAGGACACAAAGCCTAGCATTCCGCCATACATCTCGCCCCCGCCATCTGCTTTTATGGGGCCAATGTGTGCACTCTGGGATTGTTTCAGACCTGCTCAAGGATCTAAATGGTGCCAGGACTATTGCAGTAGCTGTCATTCTATGCTTGCAATAAATGAAGGCCTTCCAGGAATGGCTCCAATATTGCGCCCTGGGGGCACTGGCTTAACAGATGGTCCACTATTTGCTGCTCTTCTTGCAAAGACGCAGGCCAAAGAGGTGGGAATACCTATATGTGATGGTGCTGCAACAAGAAAATCTCCATGGAATGCTCCTGAGCTTTTTGATATTTCATTTCTCGAGGGTGAGACAATCAGGGAATGGCTCTATTTCGACAAACCTAGACGGGCCTTTGAGAGTGGTACTCGAAAGCAAAGGTCGTTACCAGATTATAGCGGCCGTGGTTGGCATGAATCAAGGAAGAAGGTGATGGAGGAGTTCGGTGGTCAGAAAAAGTCCTACTACATGGATCCACAGCCATCAAGCTCACTCGAATGGCATTTGTACGAATATGATATAAGCAATTATGATTCATTTGCATTATATAGGCTAGAACTCAAGCAAGCTGGAGCAAAAAAGAGCCCAAAGGGAAAACTACCAGCTGATCCTCTGGCTGATCTGCAGAAGAAGATGGGCAGGCTTACTGCAAAGGGCCCTGTGGAGCTTGGACAATCAGTCAAATAA 1284 46.11 MPRGLKSNCQSTSHQLLKEKAKNRVNDLQGIFTNLQSARKESRTTDVAVLEEQVHQMLREWNAELNEPSPASSFVEGSLGSFSQELARLLEHFDEEDDATSTLAEPKVEPDQHCVLACNPSDFQQQSVLGFEECKVNSEDFKLDQNFVQNLVVGMDDMSTMDCRLLDSHQEFDYGALIGAYDAGDFSQDTKPSIPPYISPPPSAFMGPMCALWDCFRPAQGSKWCQDYCSSCHSMLAINEGLPGMAPILRPGGTGLTDGPLFAALLAKTQAKEVGIPICDGAATRKSPWNAPELFDISFLEGETIREWLYFDKPRRAFESGTRKQRSLPDYSGRGWHESRKKVMEEFGGQKKSYYMDPQPSSSLEWHLYEYDISNYDSFALYRLELKQAGAKKSPKGKLPADPLADLQKKMGRLTAKGPVELGQSVK 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9943729 9946394 + Cp4.1LG05g14040.1 Cpe05g01419 470624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01419 427 PANTHER TRANSCRIPTION FACTOR VOZ2 1 427 - -
Cpe05g01419 427 PANTHER TRANSCRIPTION FACTOR VOZ1 1 427 IPR039277 GO:0006355|GO:0048578
Cpe05g01419 427 Coils Coil 18 38 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01419 Cpe16g00412 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01419 Cpe-Chr5:9943729 Cpe19g01043 Cpe-Chr19:7214459 1.03E-173 dispersed
Cpe16g00412 Cpe-Chr16:5578409 Cpe05g01419 Cpe-Chr5:9943729 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49600 None None None None Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01419 - - cmax:111469812 864.374