Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01426 ATGGTTCTAGTGTCAAAACATGGGGGAGGAGGGGAAGAAGATGCTGCAGTGGATTTTAGGGGAAACCCAGTGGAGAAGTCAAGAACCGGGGGATGGCTTGCTGCAGGGCTCATCTTAGGAACTGAACTCTCTGAAAGGATATGTGTGATGGGCATATCAATGAACTTAGTGACATATCTACTTTGGGATCTGCATCTTTCTTCAGCTAAGTCTGCAACTATTGTGACTAATTTTCTTGGGGCCCTTAATCTTCTTGGCCTTCTTGGTGGCTTCTTAGCTGATGCCAAGCTGGGACGGTTCCTCACTGTTGCAACCTTTGCTTCCATAACTGCTGTGGGTGTGATTTTGTTAACATTGGCCACAACCATCCCTGGCATGAGACCTCCTCATTGTGATATGTCCTCCACAAGGCAACTTCATCAATGCATTGCGGCTAATGGTGGGCAACTTGCCATGCTCTATGCTGCACTTTATACCATAGCACTTGGCGGAGGGGGGATAAAATCAAATGTGTCGGGATTCGGGTCCGATCAATTTGATGTCAACGATCCAAAGGAAGAGAAGGCTATGTTATTCTTCTTCAATAGGTTCTACTTTGCCATAAGCATTGGATCGTTGTTTGGTGTGATTGTGTTAGTTTATGTACAAGACAATGTGGGAAGAGGCTGGGGCTATGGAATTTCAGGAGGGACCATGGTGATTGCTGTTATTGTATTGGTTTGTGGGACAACATTTTACAGGTTTAAGAAGCCTAGAGGAAGTCCTCTAACAGTGATATGGAGGGTAGTGCTTTTGGCTTGGAAGAAGAGAAGCCTCCCTCACCCAGCTCATCCCAGGTTCTTAAATGACTACCAAAATGCCAAGGTTCCTTACACCTACAGGTTCATGTGTCTAGACAAGGCTGCAATTCTGGACGAGGTTGCGGCGATCAATCAAAACAGATATAATCCCTGGATAGTCTCGACCGTGACTGAAGTCGAGGAAGTGAAAATGGTTCTGAAGCTTTTACCCATATGGTCCACTGGCATCCTCTTTTGGACAATCTACTCTCAGATGACTACATTCACAGTAGAGCAAGCATCATTTATGGATAGAAAAGTTGGCAAGTTTGTGATTCCTGCTGGTTCTATGTCAGCCTTTCTATTCATCGCCATCCTGCTAGTCACTTCCATGAACGAGAAACTGTTCATTCCCATTGCTCGGAAACTGACTCACAATGTCCAAGGTCTCACAAGCCTACAGAGGATTGGGATTGGCCTTGTTTTCTCAATTTTTGGTATGGTGGCTGCTGGAGTTGTTGAGAAGGAGAGGAGGGCATTTGCTGTGGGACAAAATACTCTTATAAGCGTTTTCTGGTTAATACCTCAGTTCTTCTTGGTTGGTGCTGGAGAGGCATTTGCATATGTTGGACAACTCGAGTTTTTCATCAGAGAAGCACCAGAACGAATGAAATCCATGAGCACAGGACTTTTCCTTAGCACCCTTTCCATGGGATTTTTTGTAAGTAGTTTGTTGGTGACGATAGTAGAAAACGTAACCAACAAGCAATGGCTGAAAAGTAATCTCAACAAGGGAAACTTGAACTACTTCTATTGGCTACTTGCAGTGTTGGGACTGCTGAACTTTTTATTTTTTCTTCTACTGGCCCGGAAACATCAGTACAAAAACCAGCATTATTCCAGTTCTAATGACAACAATGAGGAGCTCAAGAGTTCAAGTGACAAGATCGCACTTGAAATGGAAGGACCAATTAGCATGAAGGCAACAGAAACCTAG 1776 44.26 MVLVSKHGGGGEEDAAVDFRGNPVEKSRTGGWLAAGLILGTELSERICVMGISMNLVTYLLWDLHLSSAKSATIVTNFLGALNLLGLLGGFLADAKLGRFLTVATFASITAVGVILLTLATTIPGMRPPHCDMSSTRQLHQCIAANGGQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDVNDPKEEKAMLFFFNRFYFAISIGSLFGVIVLVYVQDNVGRGWGYGISGGTMVIAVIVLVCGTTFYRFKKPRGSPLTVIWRVVLLAWKKRSLPHPAHPRFLNDYQNAKVPYTYRFMCLDKAAILDEVAAINQNRYNPWIVSTVTEVEEVKMVLKLLPIWSTGILFWTIYSQMTTFTVEQASFMDRKVGKFVIPAGSMSAFLFIAILLVTSMNEKLFIPIARKLTHNVQGLTSLQRIGIGLVFSIFGMVAAGVVEKERRAFAVGQNTLISVFWLIPQFFLVGAGEAFAYVGQLEFFIREAPERMKSMSTGLFLSTLSMGFFVSSLLVTIVENVTNKQWLKSNLNKGNLNYFYWLLAVLGLLNFLFFLLLARKHQYKNQHYSSSNDNNEELKSSSDKIALEMEGPISMKATET 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9966312 9969942 + Cp4.1LG05g14260.1 Cpe05g01426 470631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01426 591 SUPERFAMILY MFS general substrate transporter 22 555 IPR036259 -
Cpe05g01426 591 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 12 567 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cpe05g01426 591 Pfam POT family 100 515 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cpe05g01426 591 MobiDBLite consensus disorder prediction 558 591 - -
Cpe05g01426 591 Gene3D MFS general substrate transporter like domains 9 561 IPR036259 -
Cpe05g01426 591 PANTHER PROTEIN NRT1/ PTR FAMILY 6.4-LIKE 12 567 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00712 Cpe05g01426 CCT
Cpe05g01426 Cpe15g00730 CCT
Cpe04g00712 Cpe05g01426 ECH
Cpe05g01426 Cpe15g00730 ECH
Cpe05g01426 Cpe16g00767 CST
Cpe05g01426 Cpe16g00417 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01426 Cpe-Chr5:9966312 Cpe14g00882 Cpe-Chr14:7302086 0 dispersed
Cpe16g00417 Cpe-Chr16:5595382 Cpe05g01426 Cpe-Chr5:9966312 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01426 - - cmos:111451111 1098.96