Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01434 ATGGAGTGGACTAGAGGCCACGTCATCGGCCAAGGCTCCTCTGCCACCGTCTTCCTCGCCACCGCCTCTCCCGGCGGCGATATCTTCGCCGTCAAATCCGCCGAGGTTTCTCTCTCGCAATCTCTACAGAGAGAGCAATGCTTCCTTTCTTCTTTAGCCTCTCCGTATGTGGTTTTTAGTAGAGGCTGCGATGTCCGTACAGAACAGAGTGGCATCGTGATGTTCAATTTGTTCATGGAGTATTTACCCAACGGCTCACTCGCCGACGCGATTCGCCGCCGTGGAGGGCGGCTGGACGAGGCGGCGATCGGAAATTACACGCGGGACTTACTACAGGGATTACAGTACATTCATTCAAAAGGCTTAGTACATTGCGACATTAAAGCCCGAAACGTTTTGATTGGCCGAGACGGTAAGGCGAAACTGGCGGATTTCGGATGCGCCAAGTGGGCGACCCAGACGGAAGTAATCGGCGGGACGCCCCTGTTTATGGCGCCTGAAGTGGCTCGTGGTGAGCACCAAGGACTCGCCTCCGACATTTGGTCAATTGGGTGTACAATCATTGAAATGGCCACCGGCGGCGGCTCGCCATGGCTGAACACAACCGACAACGACCCAATTTCCGCCCTGTATCGAATTGGGTATTCCGGCCAGTCGCCGGAAATTCCATCTTTTTTATCCCAGAAAGCGAAGGATTTTTTAGAGAAGTGTTTTAGGAGAAACCCAAAAGAGAGATGGACGGCGATTCAGCTTCTAAATCACCCATTTTTAAGGGAAGTGAATTCCATTTCCACCGGAAAGAAAATCCGGGAAGTTGATTCAGATTCTCCGACGAGTGTTGTAGAACAGGGGATTTGGAGATCAATTGAAGAATCCAGATTTTTCCGACCCAGTTGGTCGCCGACAGAGCAGATCCGACGGCTGGCAATGGATTCAGGGGAGGCGAGATGGACAGAGGATGAGAATTGGACGACGATCCGAAGCGAAGAAGTGGGTGAGGAAGAGAGAGGCGGTGGCGGCAAAGGGTGGTTGGCAATGGCAATGGAATTCATAGATAAGAAGAATGTTAGGTGTAGAATTAGTAGAAATGATTTGGCGGACAATAGTTCTAGGTCGATGGTGATCAAGTCATTGGTGACAAAGATGGAGCCGCCGAGTTGGGTGAAGCTCCATGGCCTGCCTAAGACTCCGGCGACTGAGAAAACTACCGATTAA 1215 51.52 MEWTRGHVIGQGSSATVFLATASPGGDIFAVKSAEVSLSQSLQREQCFLSSLASPYVVFSRGCDVRTEQSGIVMFNLFMEYLPNGSLADAIRRRGGRLDEAAIGNYTRDLLQGLQYIHSKGLVHCDIKARNVLIGRDGKAKLADFGCAKWATQTEVIGGTPLFMAPEVARGEHQGLASDIWSIGCTIIEMATGGGSPWLNTTDNDPISALYRIGYSGQSPEIPSFLSQKAKDFLEKCFRRNPKERWTAIQLLNHPFLREVNSISTGKKIREVDSDSPTSVVEQGIWRSIEESRFFRPSWSPTEQIRRLAMDSGEARWTEDENWTTIRSEEVGEEERGGGGKGWLAMAMEFIDKKNVRCRISRNDLADNSSRSMVIKSLVTKMEPPSWVKLHGLPKTPATEKTTD 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10022802 10025364 + Cp4.1LG05g14280.1 Cpe05g01434 470639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01434 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Cpe05g01434 404 Pfam Protein kinase domain 5 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01434 404 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 15 1 339 - -
Cpe05g01434 404 ProSiteProfiles Protein kinase domain profile. 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01434 404 SMART serkin_6 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01434 404 Gene3D Transferase(Phosphotransferase) domain 1 2 303 - -
Cpe05g01434 404 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 339 - -
Cpe05g01434 404 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Cpe05g01434 404 PRINTS Tyrosine kinase catalytic domain signature 116 134 IPR001245 GO:0004672|GO:0006468
Cpe05g01434 404 PRINTS Tyrosine kinase catalytic domain signature 178 200 IPR001245 GO:0004672|GO:0006468
Cpe05g01434 404 PRINTS Tyrosine kinase catalytic domain signature 79 92 IPR001245 GO:0004672|GO:0006468
Cpe05g01434 404 CDD STKc_MAPKKK 2 257 - -
Cpe05g01434 404 SUPERFAMILY Protein kinase-like (PK-like) 3 288 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00721 Cpe05g01434 CCT
Cpe05g01434 Cpe15g00739 CCT
Cpe04g00721 Cpe05g01434 ECH
Cpe05g01434 Cpe15g00739 ECH
Cpe05g01434 Cpe16g00429 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00131 Cpe-Chr16:2986556 Cpe05g01434 Cpe-Chr5:10022802 5.60E-66 transposed
Cpe19g00624 Cpe-Chr19:5093380 Cpe05g01434 Cpe-Chr5:10022802 5.56E-69 transposed
Cpe10g00777 Cpe-Chr10:4420219 Cpe05g01434 Cpe-Chr5:10022802 1.73E-89 wgd
Cpe15g00739 Cpe-Chr15:7711421 Cpe05g01434 Cpe-Chr5:10022802 1.64E-121 wgd
Cpe16g00429 Cpe-Chr16:5648554 Cpe05g01434 Cpe-Chr5:10022802 0 wgd
Cpe19g00953 Cpe-Chr19:6785473 Cpe05g01434 Cpe-Chr5:10022802 3.74E-98 wgd
Cpe04g00721 Cpe-Chr4:7099314 Cpe05g01434 Cpe-Chr5:10022802 4.23E-132 wgd
Cpe05g01434 Cpe-Chr5:10022802 Cpe06g00777 Cpe-Chr6:4906718 1.83E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62446 PF00069 Pkinase 4.30E-53 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01434 K20716 - csv:101208274 491.5