Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01445 ATGTACATCTCATATGGTTCTGTCGGATTCTTTGTTCTGTCTTTAATCTCCAACATGCCAGCCGGGATTACAACACCGGCCACAAACATGTCCTCTATGTTTGGAAGCAATGGGCATAACGTTGCTGGATTTTACTCATCTTATGAACTTGTTCTTCCTCAGATCGATCGCATATCCGCAATAGCTGCAAAATATGTGGGGAAGCCAGTAGTGAACTACCCTCTACTTTCTCCACCAGTTCCATCTCGACCATTAGAGCTCGGAATGGGCAACTTCGGACCACAATCAGGCTTAGGAGGAGACATCTACGGTTCGGCTGGTGACCTAATCCGATCCATCAGCGCTCCAACCGAGGCCGACAAGCCGATGATCATTGAGCTAGCAGTTGCAGCCATGGAAGAGCTCACTAGAATGGCTCAACTAGGCGAGCCCTTATGGATGACTAGTCTAGATGGGTCCACTAATGTGCTCAATGAAGATGAGTACTTGAGAACGTTTCCAAGAGGCATTGGGCCTAAGCCATCTGGGTTTAAATGTGAAGCCTCACGTGAATCAGCTGTTGTTATCATGAACCATATTAACCTTGTTGAGATTCTCATGGACGTGAATCAATGGTCAACTTTATTCTCTGGAATTGTGTCAAGAGCTATGACACTTGAAGTGTTGTCAACTGGAGTAGCTGGAAATTACAATGGAGCTTTACAAGTGGTTACATGGGTTGAGCATGTTGAGGTTGATGATAGAGGAGTTCATAGTCTTTACAAGCAGCTGGTGAGCTCCGGCCAAGCCTTTGGGGCCAAGCGATGGGTTACAACCTTAGACCGCCAATGTGAACGGCTTGCCAGTGCCATGGCCACCAACATACCCACCGGTGATGTTGGAGTGATAACGAATCAAGAAGGGAGGAAGAGCATGTTGAAGCTGGCTGAGAGAATGGTGATAAGCTTCTGTGCTGGAGTTAGCGCCTCCACGACTCACACATGGACTACTTTGTCGGGTACCGGCGCCGATGACGTTCGAGTCATGACCCGAAAGAGTATCGACGACCCCGGAAGACCTCCGGGTATTGTCCTTAGTGCTGCAACTTCCTTCTGGCTTCCCGTTCCACCTAAGAGAATCTTTGATTTTCTCCAAATGGCGCACATCGCCAACGGTCGTGACACGGGCAACTGCGTTTCTCTTCTACGTGTAAACAGTGCAAATTCAAGCCAAAGCAACATGCTGATCCTGCAAGAAAGCTGCACAGACCCAACAGCTTCATTCGTGATCTACGCTCCAGTCGACATCGTGGCAATGAACGTCGTCCTCAACGGTGGCGATCCCGACTACGTCGCGCTTCTCCCCTCCGGGTTCGCCATTCTTCCAGACGGCACGGCAGAGACTGCCACCGGTGGTTCACTCCTGACGGTGGCATTTCAGATTCTGGTGGATTCGGTGCCAACAGCAAAACTGTCACTTGGGTCAGTTGCAACGGTGAACAATCTGATTGCTTGTACGGCGGAGAGGATTAAAGCTTCGTTGTCATGTGAGACAGCATAA 1539 49.45 MYISYGSVGFFVLSLISNMPAGITTPATNMSSMFGSNGHNVAGFYSSYELVLPQIDRISAIAAKYVGKPVVNYPLLSPPVPSRPLELGMGNFGPQSGLGGDIYGSAGDLIRSISAPTEADKPMIIELAVAAMEELTRMAQLGEPLWMTSLDGSTNVLNEDEYLRTFPRGIGPKPSGFKCEASRESAVVIMNHINLVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAGNYNGALQVVTWVEHVEVDDRGVHSLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMATNIPTGDVGVITNQEGRKSMLKLAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLPVPPKRIFDFLQMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTAETATGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTAERIKASLSCETA 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10078047 10083055 - Cp4.1LG05g14570.1 Cpe05g01445 470650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01445 512 ProSiteProfiles START domain profile. 117 225 IPR002913 GO:0008289
Cpe05g01445 512 SMART START_1 126 279 IPR002913 GO:0008289
Cpe05g01445 512 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 54 238 - -
Cpe05g01445 512 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 54 238 IPR042160 -
Cpe05g01445 512 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 237 509 IPR042160 -
Cpe05g01445 512 SUPERFAMILY Bet v1-like 298 504 - -
Cpe05g01445 512 Pfam START domain 237 279 IPR002913 GO:0008289
Cpe05g01445 512 Pfam START domain 127 234 IPR002913 GO:0008289
Cpe05g01445 512 SUPERFAMILY Bet v1-like 117 225 - -
Cpe05g01445 512 ProSiteProfiles START domain profile. 237 282 IPR002913 GO:0008289
Cpe05g01445 512 CDD START_ArGLABRA2_like 121 278 - -
Cpe05g01445 512 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 237 509 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00733 Cpe05g01445 CCT
Cpe05g01445 Cpe15g00750 CCT
Cpe04g00733 Cpe05g01445 ECH
Cpe05g01445 Cpe15g00750 ECH
Cpe05g01445 Cpe16g00448 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01445 Cpe-Chr5:10078047 Cpe20g00379 Cpe-Chr20:2136801 1.38E-56 dispersed
Cpe10g00792 Cpe-Chr10:4503487 Cpe05g01445 Cpe-Chr5:10078047 4.42E-62 wgd
Cpe15g00750 Cpe-Chr15:7784636 Cpe05g01445 Cpe-Chr5:10078047 0 wgd
Cpe16g00448 Cpe-Chr16:5744649 Cpe05g01445 Cpe-Chr5:10078047 1.79E-06 wgd
Cpe19g00972 Cpe-Chr19:6850520 Cpe05g01445 Cpe-Chr5:10078047 0 wgd
Cpe04g00733 Cpe-Chr4:7208678 Cpe05g01445 Cpe-Chr5:10078047 2.35E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01445 K09338 - dcr:108206094 565.844