Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01450 ATGAAAATGGGGCAGCTTACCTCTTTGGTGTTGGCCACTATAGTTTGTCTGATAGGCCTCATAGGCTCCACTCAAGCTCAATTGCAGCTTGGTTTCTATGCCAATAGCTGCCCAAACGCTGAGAAGATTGTGCTGGACTTTGTTCATCAGCATATCCATAATGCTCCTTCACTGGCGGCAACTTTCATTAGAATGCACTTCCATGATTGCTTCGTCAGGGGTTGTGATGCATCGGTTCTTATTAACACCACCTCAAATAACCAAGCTGAGAAGGATGCTCCTCCAAATCGAACACTCAGAGGCTTTGACTTCATTGATAGAGTTAAAAGCTTACTTGAAGCTGAATGCCCTGGAGTTGTGTCTTGTGCTGATGTTCTTTCCTTGGTTACTAGAGATACCATTGTAGCCACGGGAGGTCCTTACTGGGAAGTTCCAACAGGGCGAAGGGATGGAGTGATCTCAAGGTCATCAGAAGCCACAGCCAACATTCCTCCACCATCTTCAAACTTCTCAAGACTCCAAACCCTTTTCGGAAACCAAGGCCTTGATGTTAAGGACTTAGTATTACTATCTGGCGCACACACAATCGGCATAGCCCATTGCTCATCATTCCGCAACCGACTCTACAACTTCACCGGCGTCGGTGACCAAGACCCCTCTCTGGACCCAAGATACGCCGCTAATCTCAAGGCCAACAAATGCAAAACTCCCACCGACAACAGCAAAGTGGAAATGGACCCAGGGAGTCGTAAAACATTTGACCTTAGCTACTACTCTCTTCTTCTCAAACGAAGGGGCCTTTTCCAATCCGATTCTGCTCTCACTAAAGACGCAACTTCATTGGGTCTAGTTCAGAAACTAGTCGAAGGACCCATTGAAGAGTTCTTCGCTGAATTTGCTGCAGCCATGGAGAAAATGGGTCGGATTAACGTGAAGACTGGTACTGAAGGCGAAATCAGAAAGCGATGCGGCGTGGTGAATAGTTAA 987 46.91 MKMGQLTSLVLATIVCLIGLIGSTQAQLQLGFYANSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINTTSNNQAEKDAPPNRTLRGFDFIDRVKSLLEAECPGVVSCADVLSLVTRDTIVATGGPYWEVPTGRRDGVISRSSEATANIPPPSSNFSRLQTLFGNQGLDVKDLVLLSGAHTIGIAHCSSFRNRLYNFTGVGDQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRKTFDLSYYSLLLKRRGLFQSDSALTKDATSLGLVQKLVEGPIEEFFAEFAAAMEKMGRINVKTGTEGEIRKRCGVVNS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10105551 10108591 + Cp4.1LG05g14440.1 Cpe05g01450 470655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01450 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601|GO:0042744
Cpe05g01450 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cpe05g01450 328 Gene3D - 32 327 - -
Cpe05g01450 328 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cpe05g01450 328 PANTHER PEROXIDASE 25-RELATED 13 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 Pfam Peroxidase 46 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 Gene3D Peroxidase, domain 2 164 306 - -
Cpe05g01450 328 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PANTHER PEROXIDASE 13 327 - -
Cpe05g01450 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g01450 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00172 Cpe-Chr3:851765 Cpe05g01450 Cpe-Chr5:10105551 9.35E-59 dispersed
Cpe05g01450 Cpe-Chr5:10105551 Cpe17g00102 Cpe-Chr17:634253 1.74E-96 dispersed
Cpe16g00452 Cpe-Chr16:5765578 Cpe05g01450 Cpe-Chr5:10105551 0 wgd
Cpe04g00738 Cpe-Chr4:7230845 Cpe05g01450 Cpe-Chr5:10105551 1.24E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01450 K00430 - csv:101213629 571.237