Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01477 ATGGCATGGAATTCCTTCTACAACAGAGCCTCTAAGGCTTATCACGACCATCCCAACATCTCCAAGCTCCTCCTCGTCTTGGCCGCCAGTGGAGGTGGGCTGGTGGCAAGTACTAATGGCAAATCTCTGTACCCTTCTGCATTTGCTGATGCAGTCCACCAAGATGATGATTGGAGGAAGAAGAAGAAGAAGAAGGTGGTCGTGCTTGGAACAGGATGGGCCGGCACCAGCTTCTTGAAGAATCTCAAGAGCTCCTCTTATGATGTTCATGTCATATCCCCTCATAATTACTTCGCTTTCACCCCTTTGCTTCCTAGTGTCACTTGTGGCACCGTCGAGGCACGCAGCATTGTCGAACCAATTCGTAGCATCACCAAGAAGAAAGGATTGAGCATTGAATTTAGGGAAGCTGAGTGTTATAAGATAGATGCAGAGAACAAGAAGGTGTTCTGTCGATCAACTCAAGACACGAACTTGGGTGGCAAGGAAGAGTTTTCAGTGGACTACGACTATCTGATAGTAGCCATGGGAGCTAAATCCAACACTTTCAACACACCAGGAGTAGAGGAAAATGCTCATTTCTTGAAGGGAGTGGAAGATGCTCAGCGGATTCGACAGTCGGTAATCGATTGTTTCGAGCGAGCCAGCCTTCCAAATCTAAGTGAAGAAGAGAAGAAGAGAACCCTTCACTTTGTTATAGTTGGAGGAGGTCCAACAGGAGTGGAATTTGCAGCAGAACTTCATGACTTTGCTGCAGAGGATTTAGCAGAGTTGTATCCTTCATTGAAAGAATACGTGAAAATCACCCTCTTAGAGGCAGGCGATCATATTTTGAACATGTTTGACAAGAGGATTACAGCCTTTGCTGAAGACAAGTTTCAAAGAGATGGGATTAACTTAAAAACTGGTTCCATGGTTGTGAAAGTAACTGATAAGGAAATCTCCACAAAAGAAAGGGCAACCGGTGAGTTTGTGTCTGTTCCTTATGGAATGGTTGTCTGGTCCACCGGCATCGGTCCTCGGCCTCAAGTCGTCGACTTCATGAAGCAGATTGGTCAGACTAACAGACGAGCTTTGGCTACTGATGAATGGCTAAGGGTTGAAGGATGTGATGGTGTCTATGCTTTTGACAATTCAGGAAGTTTAGCCCTGCAAGAGTTTCAAGAAGCAGTAAAGGATATTTGTGAGAGATACCCTCAAGTAGAGATCTATCTGAAGAAGAATAAGATGAAGAACTTTGCAGCCTTGTTGAAGAAGTCGCAATCGGACACGCAGAACCAGTCGACCGAGCTCGATATCGAAAGCTTTACGTCCTTACTTTCCGAAGTCGATGCTCAGATGAAAAATCTGCCTGCTACTGCTCAAGTTGCTGCTCAACAAGGTGAGTATCTTGCAACCTGCTTCAACAAGATGGAACAATGTGAGAAGTACCCGGAAGGCCCTCTCCGATATAGAGGGACGGGGCGACATCGATTTCGTCCCTTTAGGTACAAGCATTTTGGGCAGTTTGCTCCCCTTGGTGGAGAACAAACTGCAGCTCAACTACCTGGAGATTGGATCTCAATAGGTCATAGCAGCCAGTGGCTTTGGTACTCTGTGTATACAAGGTAA 1611 45.93 MAWNSFYNRASKAYHDHPNISKLLLVLAASGGGLVASTNGKSLYPSAFADAVHQDDDWRKKKKKKVVVLGTGWAGTSFLKNLKSSSYDVHVISPHNYFAFTPLLPSVTCGTVEARSIVEPIRSITKKKGLSIEFREAECYKIDAENKKVFCRSTQDTNLGGKEEFSVDYDYLIVAMGAKSNTFNTPGVEENAHFLKGVEDAQRIRQSVIDCFERASLPNLSEEEKKRTLHFVIVGGGPTGVEFAAELHDFAAEDLAELYPSLKEYVKITLLEAGDHILNMFDKRITAFAEDKFQRDGINLKTGSMVVKVTDKEISTKERATGEFVSVPYGMVVWSTGIGPRPQVVDFMKQIGQTNRRALATDEWLRVEGCDGVYAFDNSGSLALQEFQEAVKDICERYPQVEIYLKKNKMKNFAALLKKSQSDTQNQSTELDIESFTSLLSEVDAQMKNLPATAQVAAQQGEYLATCFNKMEQCEKYPEGPLRYRGTGRHRFRPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSSQWLWYSVYTR 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10212332 10214634 - Cp4.1LG05g14830.1 Cpe05g01477 470682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01477 536 Gene3D - 54 436 - -
Cpe05g01477 536 Pfam Pyridine nucleotide-disulphide oxidoreductase 64 376 IPR023753 GO:0016491
Cpe05g01477 536 PRINTS FAD-dependent pyridine nucleotide reductase signature 169 187 - -
Cpe05g01477 536 PRINTS FAD-dependent pyridine nucleotide reductase signature 230 248 - -
Cpe05g01477 536 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Cpe05g01477 536 PANTHER NADH DEHYDROGENASE 377 535 IPR045024 GO:0003954|GO:0006116
Cpe05g01477 536 PANTHER NADH DEHYDROGENASE 4 376 IPR045024 GO:0003954|GO:0006116
Cpe05g01477 536 SUPERFAMILY FAD/NAD(P)-binding domain 230 377 IPR036188 -
Cpe05g01477 536 SUPERFAMILY FAD/NAD(P)-binding domain 63 282 IPR036188 -
Cpe05g01477 536 PANTHER - 377 535 - -
Cpe05g01477 536 PANTHER - 4 376 - -
Cpe05g01477 536 Gene3D - 439 536 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01477 Cpe15g00785 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01477 Cpe-Chr5:10212332 Cpe20g00406 Cpe-Chr20:2317680 0 dispersed
Cpe10g00830 Cpe-Chr10:4699863 Cpe05g01477 Cpe-Chr5:10212332 1.24E-63 wgd
Cpe15g00785 Cpe-Chr15:7955594 Cpe05g01477 Cpe-Chr5:10212332 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01477 K03885 - csv:101209855 946.421