Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01484 ATGGGGATCTGTTTGTCTACTGGCAATCAGTGTAGCTGCAATGGGGGAGCCAATGGAGAGAGGATCTCTGGATCCTGTTTGGGGATTAGAGTTTCTGGCCGGATTGAAAGAAAAAGAACATTTTCAGATCATACTTTTTCTATTCAGCATTTGAATTCTATACCGAATAGGCTTGTTTATAACGGGAAGACTCGAAATTCTTGCATTTTCACTCAGCAGGGTCGGAAGGGGATAAATCAGGATGCCATGGTTGTGTGGGAAGACTTCATATCAGATGGTGCAATTTTTTGTGGGGTATTTGATGGTCACGGCCCTCATGGTCATGTCGTTGCACGAAAGGTTAGAGATGTTCTTCCAAGAAAGCTGGAGTCATCCTGGGAGTCATCTCAGTTAAAGCATAATAGATCAGATAGAACTTCTTGTTTCCGGTGGAGTCAGAAGAATTCAGCAGATGGTGAACGACACGACATGGATGGTTCGCAGGAGGATAAATCAAGTTCTTTATGGAGAAAAGCTTTTCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAATCTCATCCCAAAGTGGACTGTTTCTGCAGTGGTTGTACTGCAGTCACTTTGGTTAAGCAGGGTTCCGATCTATTCGTGGGAAGTATCGGGGATTCTCGAGCAATTCTCGGATCGAAAGATAGCAGTGATTCGCCTGTAGCAACCCAATTGACAGTAGATCTAAAGCCTGATTTACCCAGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTGTTTGCATTGCAAGATGAACCAGAAGTGCCAAGAGTGTGGCTGCCATTCGACAATGCACCTGGCTTAGCCATGGCTCGAGCGTTTGGCGACTTCTGTTTGAAGGACTATGGAGTTATCTCTATTCCCGAATTTTCGCACCGTGTGCTTACAGATAACGATCTGTTTGTTGTCCTTGCTTCCGATGGGGTTTGGGACGTATTGAGCAACCAAGAGGTGGTTGAGATAGTTCATTCTGCCCCAACTCGCTCATCGGCAGCTCGGATGGTGGTAGACTCGGCTGCTCATGAATGGAAGCTCAAGTACCCTACTTCAAAAATGGACGACTGTGCAGTCGTTTGCTTATTCTTGGACGGGAAAATGGATTCAAATTCAGAAAATGAAGAACAATCTCTTGCAACTCTTCAAACCGATGAAATGGATAACACGGAAAATTCAGATGAAGAGCAGAGGTTGGAGCCAAGTTTACAGAGGAACAATACGGTCCGATCATCGGAAGAAAAAGAGCAAATCGGAGGGCGATCTTCACAAAGCGAAGAGAATGGAGAATCAATCTGTGCTAAAGATGAGAATTGGTTAGGATTGGAGGGTGTAACGAGAGTAAACTCCCTGATTCAACTTCCTAGATTTTCTTGTACTAAGAACATAGTTGAAGAAGGTTGTAATGGCGGATGA 1443 44.21 MGICLSTGNQCSCNGGANGERISGSCLGIRVSGRIERKRTFSDHTFSIQHLNSIPNRLVYNGKTRNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGVFDGHGPHGHVVARKVRDVLPRKLESSWESSQLKHNRSDRTSCFRWSQKNSADGERHDMDGSQEDKSSSLWRKAFLKSYKAMDKELKSHPKVDCFCSGCTAVTLVKQGSDLFVGSIGDSRAILGSKDSSDSPVATQLTVDLKPDLPREAERIKKCKGRVFALQDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTDNDLFVVLASDGVWDVLSNQEVVEIVHSAPTRSSAARMVVDSAAHEWKLKYPTSKMDDCAVVCLFLDGKMDSNSENEEQSLATLQTDEMDNTENSDEEQRLEPSLQRNNTVRSSEEKEQIGGRSSQSEENGESICAKDENWLGLEGVTRVNSLIQLPRFSCTKNIVEEGCNGG 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10246340 10249572 - Cp4.1LG05g14810.1 Cpe05g01484 470689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01484 480 CDD PP2Cc 72 373 IPR001932 -
Cpe05g01484 480 Pfam Protein phosphatase 2C 152 348 IPR001932 -
Cpe05g01484 480 MobiDBLite consensus disorder prediction 142 163 - -
Cpe05g01484 480 MobiDBLite consensus disorder prediction 148 163 - -
Cpe05g01484 480 Gene3D - 54 375 IPR036457 -
Cpe05g01484 480 ProSiteProfiles PPM-type phosphatase domain profile. 66 373 IPR001932 -
Cpe05g01484 480 PANTHER ALPHABET, ISOFORM E-RELATED 1 461 - -
Cpe05g01484 480 MobiDBLite consensus disorder prediction 381 439 - -
Cpe05g01484 480 SMART PP2C_4 55 371 IPR001932 -
Cpe05g01484 480 MobiDBLite consensus disorder prediction 382 396 - -
Cpe05g01484 480 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 461 - -
Cpe05g01484 480 SUPERFAMILY PP2C-like 60 375 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01484 Cpe15g00794 CCT
Cpe04g00768 Cpe05g01484 CCT
Cpe05g01484 Cpe16g00480 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01484 Cpe-Chr5:10246340 Cpe14g00830 Cpe-Chr14:6723905 1.75E-147 dispersed
Cpe15g00794 Cpe-Chr15:8009641 Cpe05g01484 Cpe-Chr5:10246340 0 wgd
Cpe16g00480 Cpe-Chr16:5897634 Cpe05g01484 Cpe-Chr5:10246340 1.59E-64 wgd
Cpe04g00768 Cpe-Chr4:7384328 Cpe05g01484 Cpe-Chr5:10246340 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01484 - - cmax:111469610 961.059