Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01500 ATGGGCTGTATCTGTTCTAAGGTTCTAGCCGATGAGTGTAGTGACCAGGAATATGATATCTCCAAAAGAGCTTATTCCGCCAGGAATCATCTCTCTGAATTGAAAATTTCAGGAGCTGGCTCTCTGAAACTGGAGAAGAATTGGGAAAATGATAGACTGGATTGTGGTGATGTTAAAGTTATGTTGTTTGATACGAAGGTAAATGGTGAAGTTCCTGAGATCCCTGATGCTACCATTGTCAATCATCCATGTATGGGAAAGATTCCAAAGGCTACTGAGGCCGAGCAGGTCGCTGCCGGGTGGCCGAGTTGGCTGGCTACGGCGGCTGGTGAGGCTATCAAAGACTGGTTGCCAAAACGTGCAAGTAACTTCATCAAGCTAGAGAAAATTGGGCAGGGAACTTATAGCAGCGTGTATAAAGCTCGTGATATCGTTCGAGATAAAGTTGTGGCGTTGAAAAGGGTCACGTTCGACAATCAAGATACCGAGAGTATCAAGTTTATGGCAAGGGAAATCCTTGTTTTGCGAAGGCTTGATCATCCAAATATAGTTAAGTTGGAAGGTTTGATCATTTCACAAGCATCATGTACCATGTATCTTGTTTTTGAATATATGGAACATGATCTTACTGGACTTGCGTCACGCCCTGGCACGTCGTTCACCGAACCACAGATGAAGTGTTACATGAAGCAACTTTTGAGTGGACTTGATCACTGTCACAGCAATGGGGTTTTGCATCGAGACATAAAGGGCTCGAATCTTCTTATCGACAACAATGGCGTTTTGAAGATAGCGGATTTCGGGTTGTCAGTTTTCTTTGATTCACAGTCGACAGTTCCCATGACGAGTCGTGTAGTAACTCTCTGGTATCGACCACCGGAGCTTCTACTCGGAGCATCTCAATATGGAGCTGAAGTTGATTTATGGAGTGCTGGTTGCATTCTAGGAGAGTTATATACCGGCAAGCCTATCTTGCCAGGAAAAACAGAGGTTGAACAACTACACAAGATATTTAAGCTATGTGGTTCCCCCTCCAAGGAATATTGGAACAATTCGCACTTGAAGCATTCAGCAAGCATGAAGCCTCCACAGGCGTACGAAAGATGTCTTCGAGAACGATATAACGATTTGCCTCGTGCTGCTGTTGAGCTTATGGACACTTTGCTGTCTATCGATCCTGCAGGGCGAGGAACTGCGGCATCTGCACTCAACAGTGAGTTCTTTACCACGAGGCCATTCCCATGCGATCCTTCAAGTTTGCCAAAATACCCTCCCAGCAAAGAGATCGACTCGAAAATGCGCGAAGACGAAGCAAGGAGGCAACAAGGAGTAGTCGGTGGAAAAAACCGAACAGTTGACTCGGAAACGAAAGGACTGAAGCAATCACGGGTAGTTCCTTCAGCTAAGGCGAACGCTGAGTTGGTTATGTCACTATTGAGAAAACAAAGTCGTTCGAGCTCGACGTGTTCTTACAGTTTGGTGTCCAAGAGAACCTCAAATTCAGGTCCTATAACTCAGGGACCAAGATTTCCAAACTCCAAAAGGGAGAAACATGTTTCTTCGATTCCGAGCGAGTATCTAACGTCGTCTGGTTCTATTGAATTTGCTTCTTATACAAACATGTCGAAGAAGGAAAGCGAGTTCCAAAGCCAGAATCGTCGAGTCAAGACAAAAGCTCTGCAGACGAGCTCATGA 1695 45.19 MGCICSKVLADECSDQEYDISKRAYSARNHLSELKISGAGSLKLEKNWENDRLDCGDVKVMLFDTKVNGEVPEIPDATIVNHPCMGKIPKATEAEQVAAGWPSWLATAAGEAIKDWLPKRASNFIKLEKIGQGTYSSVYKARDIVRDKVVALKRVTFDNQDTESIKFMAREILVLRRLDHPNIVKLEGLIISQASCTMYLVFEYMEHDLTGLASRPGTSFTEPQMKCYMKQLLSGLDHCHSNGVLHRDIKGSNLLIDNNGVLKIADFGLSVFFDSQSTVPMTSRVVTLWYRPPELLLGASQYGAEVDLWSAGCILGELYTGKPILPGKTEVEQLHKIFKLCGSPSKEYWNNSHLKHSASMKPPQAYERCLRERYNDLPRAAVELMDTLLSIDPAGRGTAASALNSEFFTTRPFPCDPSSLPKYPPSKEIDSKMREDEARRQQGVVGGKNRTVDSETKGLKQSRVVPSAKANAELVMSLLRKQSRSSSTCSYSLVSKRTSNSGPITQGPRFPNSKREKHVSSIPSEYLTSSGSIEFASYTNMSKKESEFQSQNRRVKTKALQTSS 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10337744 10340397 + Cp4.1LG05g14910.1 Cpe05g01500 470705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01500 564 MobiDBLite consensus disorder prediction 416 463 - -
Cpe05g01500 564 SUPERFAMILY Protein kinase-like (PK-like) 119 416 IPR011009 -
Cpe05g01500 564 ProSiteProfiles Protein kinase domain profile. 124 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01500 564 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Cpe05g01500 564 PANTHER CELL DIVISION PROTEIN KINASE 72 542 - -
Cpe05g01500 564 CDD STKc_CDK9_like 124 408 - -
Cpe05g01500 564 MobiDBLite consensus disorder prediction 544 564 - -
Cpe05g01500 564 MobiDBLite consensus disorder prediction 427 443 - -
Cpe05g01500 564 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 72 542 - -
Cpe05g01500 564 Gene3D Phosphorylase Kinase; domain 1 110 206 - -
Cpe05g01500 564 SMART serkin_6 124 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01500 564 Gene3D Transferase(Phosphotransferase) domain 1 207 446 - -
Cpe05g01500 564 Pfam Protein kinase domain 125 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01500 564 MobiDBLite consensus disorder prediction 489 508 - -
Cpe05g01500 564 MobiDBLite consensus disorder prediction 489 523 - -
Cpe05g01500 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01500 Cpe15g00808 CCT
Cpe04g00781 Cpe05g01500 CCT
Cpe05g01500 Cpe15g00808 ECH
Cpe04g00781 Cpe05g01500 ECH
Cpe05g01500 Cpe16g00777 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01500 Cpe-Chr5:10337744 Cpe14g00334 Cpe-Chr14:2027755 0 dispersed
Cpe16g00777 Cpe-Chr16:7693043 Cpe05g01500 Cpe-Chr5:10337744 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62447 PF00069 Pkinase 3.50E-69 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01500 - - bhj:120088593 880.552