Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01514 ATGGAGGATCAGCGAGATGATGTTGCACAATCAGAGCAAGGGCCTTCCAATGCTACCTGGTGGTCTTCTGATTTCGTGGAGAAATTTGGATCTGTTTCTTTGGGCCCTCGGGAAGATACTGTAAGTGAAAAGGAAGAGCTCATCAATTCTGACCAAGATGCGTTGTTGTCGCCTCAAAGAGCATCTCAAATTCTCTGGCGTACTGGAATGCTTTGTGAACCAATTCCAGATGGTTTCTATTCTGTTATTCCGGACAAAAGGCTAAAAGAGCAGTTCCACAGTATTCCTTCGCTGGATGAGCTTCGTGCTTTGGAGGCCGAAGGTTACAAAAACGATGTTATTCTTGTGGAGACGGAGAAAGATAAAAAGCTTTCTATGCTGAAGCAACTGATCTTGACACTGGTTAAAGGATTGAGTTCAAATCCAGCTGCAATTATCAAGAAGATCGCAGGACTGGTTTCTGACTTTTATAAACGACCAATTTTAGAAAGTCCAGCAAAAGCCGCTGTAGAAGAAACCTCCCACTTGTTTGAGGATAGAGGCATTCAATTACTTGGACAAATAAAATTTGGTTCATGCCGTCCAAGAGCCATCTTATTTAAGTCTCTGGCAGACACAGTAGGGCTCGAAAGCCGTCTCATGGTGGGCTTGCCAAATGAGGGGGCTATTGGGTGCGTGGACTCATACAAGCATATGTCTGTGACAGTTGTGTTGAATTCTGTGGAACTAGTCGTTGATCTTATGCGATTTCCTGGCCAGTTGTTACCTCGGTCAACTAAGGCAATTTTTATGACCCATATTTCTGCTGCTGGGGAAAGTGATTCTGCAGAAAACGACTCCTGTGATTCACCTCTGGAACCTAATAGTCCTCTTTATGGGTTCTCAGAGAGAGTTGATCCCGACAGAAAATTTGATGCAGCTTCTAATGCATATGGTCCTAAATTGCGCAACTGGATGTTGCGTTCAAGTACAACACTTGACAGCAAACTGAGTTTATCACATAGTGAACCTAACATTGCAAATGCATTTTGGCGACGTAGTCGGAGAAAGGATATTGCTGAACAGCGGACTGCTAGTTCAAGTCCAGAGCATCCTTCATTTCGGGCGCGTGGCCGGTCCATGCTTAGTGGGGATAGGAAAGTCTTCAGAGATTTTTCTGATGATGTCTCTACTTCAAGATCAGATGGCGCTTCAACTTCAGAAGCACGTCGAATAAGAAGAAGGAGCATCAGCATTACTCCAGAGATTGGTGATGATATCGTGAGGACTGTGCGAGCAATGAATGAAACAATGAAGCAAAATCGTCTTTTGAGAGGACAAACAGATGACAGGTCGTTCTCCCACCCTTCAAATGAACGAAATAGTAGTTCAGATGTTCGGAGAAATGATCCATTGGGTTCTCAAAGAGCAATATCATTACCAACATCGCCACATGAGTATAGGGGTCAAACCTCTGATAGAAGTGAACATTCGGCATTTGCGAATGATGATTTAGCCTCAAAATGGACTAAAGTTCTTGAATCTTTCTCCATGAACGACAAACCACTATTACCTTACCCCGAATGGAACATTGATTACTCAGAACTCACAGTTGGAATCCGTATTGGAATTGGGTTTTTTGGAGAAGTTTTTCGTGGCATTTGGAATGGAACAGATGTGGCGATCAAAGTTTTCCTAGAGCAAGATCTAACTCCTGAAAACATTGAAGACTTCTGTAATGAGATATCAATTCTTAGTCGTCTTCGACATCCTAGTGATTGCATGTGTCACTGTATTTTCTTCGTTCTCACTACAAATGGTGCTTATATTGCTGCAGTTTTGTTGTTTCTGGGTGCATGCACAAAGCCGCCACGATTATCAATGGTCAGTGAATACATGGAAATGGGCTCCTTGTATTCCTTGATCCATTTGAGTGGTCAGAAAAAAAAACTAAGCTGGCGGAGAAGACTAAAGATGTTGCGTGACATATGCAGGGGTTTGATGTGCATACATCGAATGAAAATAGCTCATCGGGACCTAAAAAGTGCAAATTGCCTAGTGAACAAGCATTGGACTGTCAAGATATGTGATTTTGGACTTTCAAGAGTATTGACTGAGGCTCCAGCAAGAGGGTCTCCATCTGCAGGAACTCCAGAATGGATGGCTCCTGAGCTCTTTCGAAACGAACCCTTCACTGAAAAGTGTGATATTTTCAGCCTGGGGGTAGTTTATGCTGTTGGCACCGAGGGGGCACGCCTAGAGATTCCTGAAGGACCCCTTGGCAGACTTATATCAGATTGTTGGGCAGAACCAAATGAACGGCCAAGCTGCGAAGAGATTCTCTCACGCTTGCTCGACTGCGAGTACTCGCTTTCTTGA 2358 43.72 MEDQRDDVAQSEQGPSNATWWSSDFVEKFGSVSLGPREDTVSEKEELINSDQDALLSPQRASQILWRTGMLCEPIPDGFYSVIPDKRLKEQFHSIPSLDELRALEAEGYKNDVILVETEKDKKLSMLKQLILTLVKGLSSNPAAIIKKIAGLVSDFYKRPILESPAKAAVEETSHLFEDRGIQLLGQIKFGSCRPRAILFKSLADTVGLESRLMVGLPNEGAIGCVDSYKHMSVTVVLNSVELVVDLMRFPGQLLPRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDPDRKFDAASNAYGPKLRNWMLRSSTTLDSKLSLSHSEPNIANAFWRRSRRKDIAEQRTASSSPEHPSFRARGRSMLSGDRKVFRDFSDDVSTSRSDGASTSEARRIRRRSISITPEIGDDIVRTVRAMNETMKQNRLLRGQTDDRSFSHPSNERNSSSDVRRNDPLGSQRAISLPTSPHEYRGQTSDRSEHSAFANDDLASKWTKVLESFSMNDKPLLPYPEWNIDYSELTVGIRIGIGFFGEVFRGIWNGTDVAIKVFLEQDLTPENIEDFCNEISILSRLRHPSDCMCHCIFFVLTTNGAYIAAVLLFLGACTKPPRLSMVSEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIAHRDLKSANCLVNKHWTVKICDFGLSRVLTEAPARGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVVYAVGTEGARLEIPEGPLGRLISDCWAEPNERPSCEEILSRLLDCEYSLS 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10427365 10436448 + Cp4.1LG05g15050.1 Cpe05g01514 470719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01514 785 Gene3D Phosphorylase Kinase; domain 1 520 592 - -
Cpe05g01514 785 ProSitePatterns Protein kinases ATP-binding region signature. 535 556 IPR017441 GO:0005524
Cpe05g01514 785 MobiDBLite consensus disorder prediction 431 491 - -
Cpe05g01514 785 MobiDBLite consensus disorder prediction 1 20 - -
Cpe05g01514 785 SMART serkin_6 529 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01514 785 ProSiteProfiles Protein kinase domain profile. 529 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01514 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Cpe05g01514 785 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 30 783 - -
Cpe05g01514 785 Pfam Ethylene-responsive protein kinase Le-CTR1 59 254 - -
Cpe05g01514 785 PANTHER MITOGEN ACTIVATED PROTEIN KINASE KINASE KINASE-LIKE PROTEIN-RELATED 30 783 - -
Cpe05g01514 785 MobiDBLite consensus disorder prediction 460 481 - -
Cpe05g01514 785 MobiDBLite consensus disorder prediction 351 373 - -
Cpe05g01514 785 MobiDBLite consensus disorder prediction 387 406 - -
Cpe05g01514 785 MobiDBLite consensus disorder prediction 436 459 - -
Cpe05g01514 785 SUPERFAMILY Protein kinase-like (PK-like) 507 777 IPR011009 -
Cpe05g01514 785 CDD STKc_MAP3K-like 535 777 - -
Cpe05g01514 785 Gene3D Transferase(Phosphotransferase) domain 1 604 747 - -
Cpe05g01514 785 Pfam Protein kinase domain 534 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01514 Cpe16g00766 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01514 Cpe-Chr5:10427365 Cpe02g00257 Cpe-Chr2:1330695 8.40E-60 dispersed
Cpe16g00766 Cpe-Chr16:7615432 Cpe05g01514 Cpe-Chr5:10427365 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62449 PF00069 Pkinase 5.70E-39 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01514 - - csv:101220859 1374.38