Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01529 ATGAAATTTGTAGAGCAGAGCTTGAAGCAACAGTCGGAACAGATATGCAAGACTGTTGAGGTCGACGTAATTGATCACCATCGCACTGCATCGTCGCTGGTCGAATTGGAAGCTTCTGAAGATTGCGAGAGGGATGGACCGGATGGTGACGGCCTCTATATTCCTCCCCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCTAATTCTGCTAACTTCTCCTTCCTCCAAACCCTAGGCCTCCGTTCCATTATATGTCTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTTCTCAAGTCTAACGGAATCAGATTGTATCAATTTGGAATCGAGAGCTATAAGGAGCCTTTTGTGAATATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGACGATAGAAATCATCCAATCCTCATACATTGCAAGAGAGGAAAGCATCGTACAGGTTGCCTTGTGGGATGCCTGAGAAAATTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTACCAGAGATTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTTATGGAATTGTTCGATGTCTCCGACTTGAGGCATCTTCCCATGTCATTCGCATGCTCAAAGAGGTGA 648 45.83 MKFVEQSLKQQSEQICKTVEVDVIDHHRTASSLVELEASEDCERDGPDGDGLYIPPLNFSMVDNGIFRSGFPNSANFSFLQTLGLRSIICLCPEPYPEHNMEFLKSNGIRLYQFGIESYKEPFVNIPDDMIREALKVVLDDRNHPILIHCKRGKHRTGCLVGCLRKLQRWCLTSVFDEYQRFAAAKARISDQRFMELFDVSDLRHLPMSFACSKR 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10530069 10534189 - Cp4.1LG05g15330.1 Cpe05g01529 470734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01529 215 PANTHER TYROSINE-PROTEIN PHOSPHATASE 7 213 - -
Cpe05g01529 215 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 199 IPR029021 -
Cpe05g01529 215 Pfam Tyrosine phosphatase family 53 201 IPR004861 -
Cpe05g01529 215 Gene3D Protein tyrosine phosphatase superfamily 53 202 IPR029021 -
Cpe05g01529 215 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Cpe05g01529 215 PRINTS Plant and fungal dual specificity phosphatase signature 53 70 IPR020428 GO:0016791
Cpe05g01529 215 PRINTS Plant and fungal dual specificity phosphatase signature 126 140 IPR020428 GO:0016791
Cpe05g01529 215 PRINTS Plant and fungal dual specificity phosphatase signature 109 123 IPR020428 GO:0016791
Cpe05g01529 215 PRINTS Plant and fungal dual specificity phosphatase signature 90 103 IPR020428 GO:0016791
Cpe05g01529 215 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 121 161 IPR000387 GO:0016311|GO:0016791
Cpe05g01529 215 CDD PFA-DSP_Siw14 52 199 - -
Cpe05g01529 215 ProSiteProfiles Dual specificity protein phosphatase domain profile. 58 209 IPR020422 GO:0006470|GO:0008138
Cpe05g01529 215 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 7 213 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe18g00256 Cpe-Chr18:4212289 Cpe05g01529 Cpe-Chr5:10530069 2.67E-76 transposed
Cpe15g00854 Cpe-Chr15:8351458 Cpe05g01529 Cpe-Chr5:10530069 9.73E-46 wgd
Cpe16g00749 Cpe-Chr16:7535164 Cpe05g01529 Cpe-Chr5:10530069 3.40E-134 wgd
Cpe04g00827 Cpe-Chr4:7718030 Cpe05g01529 Cpe-Chr5:10530069 1.31E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01529 K18045 - csv:101222170 375.941