Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01548 ATGGAAATGTTCTTCTCGCTTCAGAAGTTTGGACTTCCCTCATTTTGTCCAGAATGCAGCAAGATCAACACAAAAAGGTCAGGATTCTTCTCTAATCAGTTTATGCAACAGAATTCAACCGAAGTGGAGTTCTTCTCTGATTATGCCGATGCCAGTCGATACAAAATTCAGGAGGTAATCGGGAAAGGAAGCTATGGTGTGGTGTCTTCTGCGATCGACACTCGCACCGGCGACAAGGTTGCTATAAAGAAGATTCATAATATTTTTGAGCATATATCTGATGCTGTTAGAATTCTCCGTGAGATAAAGCTGCTTAGACTTCTTCGTCATCCTGATATTGTTGAAATTAAACACATTATGCTCCCTCCTTCGAGGAGGGACTTCAAAGATATCTACGTTGTTTTTGAGCTCATGGAATCTGATCTTCATCAAGTTATTAAAGCAAATGATGATCTGACTCGAGAACACTATCAGTTTTTTCTCTATCAACTTCTTCGTGCGTTAAAGTATATTCATACAGGTATCATTTTGGTCATATCTGACTCGAAGCTTCGTGTTGCAGCGAATGTCTACCATCGGGATTTGAAACCGAAGAATATATTGGCGAATGCAAATTGTAAACTTAAAATTTGTGATTTTGGATTGGCAAGAGTCGCATTTAGTGACACGCCAACGACAGTTTTCTGGACGTATACACCTGCAATTGATATTTGGAGTATTGGCTGCATATTTGCTGAAGTATTAATGGGGAAGCCACTTTTTCCTGGCAAAAACGTTGTTCACCAGCTCGATTTGATGACGGACCTTCTTGGAACTCCTTCATTAGATACAATCTCCAGGGTTCGTAACGACAAGGCTAGACGATATTTAACGACCATGCGGAAAAAGCAGCCGGTGTCATTTGCTCAAAAGTTTCCAAATGCTGATCCTTTAGCGCTGAGGCTATTAGAAAGGTTGCTTGCTTTTGATCCAAAAGATAGGCCAACTGCTGAAGAGGCATTGGCAGATCCATACTTCAAGGGATTGGCGAAAATTGAGAGGGAACCTTCCTGCCAGCCAATCACAAAGATGGAATTTGAATTTGAGAGGCGGAGGGTAATAAAAGAAGACATTCAAGAGCTAATCTTCCGTGAGATATTAGAATATCATCCCCAGCTACTAAAAGACTACATGAATGGGACTGAGAGAACAAATTTTCTATATCCAAGTGCTGTTGATCAATTTAGAAAGCAGTTTGCACATCTGGAGGAAAATGGTGGTAAAAGTGCACCGGCAATTCCTCTTGACAGAAAGCACGTATCCCTCCCAAGGTCAACAGTTGTACACTCGAACCCGGTCTATTCTAAGGACCAACTAAACAATGTACCCGTCCAAGATGGGAAGATCTCCGAACAGGCATACAGCAAGAATTCCCGAGATAGCGAAGGACGGCTAACAAATATATCAAGAACCATGCAGGCACCACAAAAGATCCCATTTGCCAAGCCTGGAAGAGTGGTTGGACCAGTTATAGCAGATGAGAGCGGAATGCGAGTGAAGGAACCATACGATCCGAGAACGTTGATCAGAGGTGCCATTCTTCCTCCTGCATATCATTACCAGAAACCCTATGCAGCAAATCAAGAAAGATCTGCAGCAGAAACGAAACTGGATATTTCACTAAGGGCCACCAAGCAAGCTTCCCAGTGTGGCATGGCTTCCAAAATAGGAACAGACATAGCCATCAGCATTGACTCGAACCCCTTTTATATGACACGTGCCGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATTGACGCTAACTTTCTACAGGCCAAGGCCTCCCAATACAGTGGCATTGGTGCAGCAACCGCCACCACCACCTCGGTTGCTCACAGAAAGGTCGTTGCCGGTCAGTTTAGCATGACAAAGATGTACTAA 1926 43.2 MEMFFSLQKFGLPSFCPECSKINTKRSGFFSNQFMQQNSTEVEFFSDYADASRYKIQEVIGKGSYGVVSSAIDTRTGDKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTGIILVISDSKLRVAANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVSFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVIKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPAIPLDRKHVSLPRSTVVHSNPVYSKDQLNNVPVQDGKISEQAYSKNSRDSEGRLTNISRTMQAPQKIPFAKPGRVVGPVIADESGMRVKEPYDPRTLIRGAILPPAYHYQKPYAANQERSAAETKLDISLRATKQASQCGMASKIGTDIAISIDSNPFYMTRAGVNKVELKDQISIDANFLQAKASQYSGIGAATATTTSVAHRKVVAGQFSMTKMY 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10632667 10637558 - Cp4.1LG05g15500.1 Cpe05g01548 470753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01548 641 ProSiteProfiles Protein kinase domain profile. 54 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01548 641 SUPERFAMILY Protein kinase-like (PK-like) 50 343 IPR011009 -
Cpe05g01548 641 Pfam Protein kinase domain 54 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01548 641 Gene3D Phosphorylase Kinase; domain 1 70 385 - -
Cpe05g01548 641 Gene3D Transferase(Phosphotransferase) domain 1 140 362 - -
Cpe05g01548 641 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 516 - -
Cpe05g01548 641 SMART serkin_6 54 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g01548 641 ProSitePatterns Protein kinases ATP-binding region signature. 60 84 IPR017441 GO:0005524
Cpe05g01548 641 CDD STKc_TDY_MAPK 53 384 - -
Cpe05g01548 641 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 516 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01548 Cpe15g00873 CCT
Cpe05g01548 Cpe16g00740 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01548 Cpe-Chr5:10632667 Cpe12g00231 Cpe-Chr12:1545585 0 dispersed
Cpe15g00873 Cpe-Chr15:8465383 Cpe05g01548 Cpe-Chr5:10632667 0 wgd
Cpe16g00730 Cpe-Chr16:7402300 Cpe05g01548 Cpe-Chr5:10632667 0 wgd
Cpe04g00845 Cpe-Chr4:7825050 Cpe05g01548 Cpe-Chr5:10632667 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62451 PF00069 Pkinase 6.70E-50 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01548 - - csv:101216657 1078.54