Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00005 ATGGGCCTCAAAGTGCTCTCCGCTCTCGACACTGCCAAAACCCAATTGTACCATTTCAAGGCCATCGTCATCGCCGGGATGGGCCTCTTCACCGACGCCTACGATCTCTTCAGCATCACTCCCGTTATGACCCTCGTCGGACGTGTGTACTACCAGGACAAACACTACGAGATTCCCGCCGCCGTCAAATCCGCTATGCTGGCCGTCGCCCTTCTCGGCACCGCCACGGGTCAAGTGGTGTTCGGCATACTCGGAGATCGAGTGGGACGACGGCGCGTGTACGGACTCGCATTGGCGCTGATGGTGCTGAGTTCCATCGGATGTGGGTTCTCAATCTGCACCACAAGGAGCTGCGTCCTTGTCAGCCTAGGGTTCTTCAGGTTCCTTCTGGGACTGGGAATTGGGGGAGATTACCCATTGTCGGCGACCATAATGTCGGAGTTCGCCAACAAGAAGACACGTGGGGCGTTCATAGCGGCGGTGTTCTCGATGCAGGGATTCGGGATCTTGGCCAGCTCCACGGTGACCATGATCGTGTGCTCCATATTCGATCGGGCCTCCAATTACCCACCCAGTAATCATACCCCCATGGGGGCGGATATTGCTTGGAGGTTGATTCTCCTGCTCGGCGCTCTTCCGGCGGCGATGACTTATTACTGGCGAATGATGATGCCGGAAACCGCCAGATACACAGCTCTGGTTGAGCGGAATGTGGCACAAGCGGCGAAGGACATGGAGAAGGTGTTGGATGTGTCGTTGGCTGATATCACCGAGGACAGCCCTGTTTCCCCTCCCACTCCAAATTTCCCCTTCTTTTCCAACGAATTTCTCCGTCGCCACGGCCGCGACCTTCTCTCCTGCGCCGCCGCTTGGTTCCTCGTCGACGTTGTGTTCTACAGCAGCAACCTCTTCCAATCCAGAATCTACACCCAATTCCTTCCCCCAAAACTCACCCGCAACGTCTACCAAGACGCCTTCAACGAAGCCAAACTCCAAGCCATCGTGGCCGTCTGTTCCACCATTCCTGGCTACTGGGTCTCCGTCTATTTCATCGACCGACTCGGCCGAGTCAAAATCCAAATCATGGGCTTTCTCTTCATGGGCATTGGCTATTTCGCCATCGCCATTCCCTACAACAGATACTGGGACTCCGATCACAAATTTGGCTTCATGGTAATCTACTGCCTCACATTCTTCTTCTCAAACTTCGGCCCCAACACCACCACTTTCATTCTCCCTGCCGAGCTCTTTCCCGCCAGGTTCAGATCCACCTGCCATGGAATCTCCGGCGCGGCTGGCAAAATCGGGGCCATCATCGGGGCCGTGGGGTTCCTTTGGGCTTCGCACGACCGGTCGGATAATGGAATTGGGATGCAGGCGTCGCTGATAATACTTGGTGGGGCGAGTCTGGTGGGAGTGGCGGTGACGTATTTGTTCACCAGAGAGACCACCGGAAGGTCGTTGGAAGAGAACGAGAAGGAAGATGAGTACGCTGGAGTTTGGTTTATAAGGTTGTTTCTCCACAATAATACTGCTTCTGCTTCCTCCCGTCTGTCTGTTGGTGAACACGAGGACATGTCGTCACGTTCAACCGCCAACTCCATTCGAAGTAGTACACCGATCCATTAG 1629 55.06 MGLKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFSITPVMTLVGRVYYQDKHYEIPAAVKSAMLAVALLGTATGQVVFGILGDRVGRRRVYGLALALMVLSSIGCGFSICTTRSCVLVSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGAFIAAVFSMQGFGILASSTVTMIVCSIFDRASNYPPSNHTPMGADIAWRLILLLGALPAAMTYYWRMMMPETARYTALVERNVAQAAKDMEKVLDVSLADITEDSPVSPPTPNFPFFSNEFLRRHGRDLLSCAAAWFLVDVVFYSSNLFQSRIYTQFLPPKLTRNVYQDAFNEAKLQAIVAVCSTIPGYWVSVYFIDRLGRVKIQIMGFLFMGIGYFAIAIPYNRYWDSDHKFGFMVIYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGAAGKIGAIIGAVGFLWASHDRSDNGIGMQASLIILGGASLVGVAVTYLFTRETTGRSLEENEKEDEYAGVWFIRLFLHNNTASASSRLSVGEHEDMSSRSTANSIRSSTPIH 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15335 17284 + Cp4.1LG06g00030.1 Cpe06g00005 470785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00005 542 MobiDBLite consensus disorder prediction 517 542 - -
Cpe06g00005 542 CDD MFS_PhT 22 483 - -
Cpe06g00005 542 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 484 IPR020846 GO:0022857
Cpe06g00005 542 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016021|GO:0022857|GO:0055085
Cpe06g00005 542 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 1 496 - -
Cpe06g00005 542 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 496 - -
Cpe06g00005 542 Pfam Sugar (and other) transporter 23 492 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cpe06g00005 542 Gene3D MFS general substrate transporter like domains 17 500 IPR036259 -
Cpe06g00005 542 SUPERFAMILY MFS general substrate transporter 9 495 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00005 Cpe-Chr6:15335 Cpe15g00078 Cpe-Chr15:560731 0 dispersed
Cpe06g00005 Cpe-Chr6:15335 Cpe08g00332 Cpe-Chr8:2075312 0 transposed
Cpe06g00005 Cpe-Chr6:15335 Cpe12g00143 Cpe-Chr12:916974 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00005 K08176 - csv:101218554 884.404