Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe06g00061 | ATGGGAACACAAATTTGGTTCATATTATATCTTCTGACCATCCAAATTTCAATATCTGGAGTATTATCCACCACTTTCAGCATAGTAAATAAATGTGAGTACACAGTTTGGCCGGGAATTCTCTCCAACGCCGGAGTTCCACCACTTCCCGCCACCGGCTTCGTCCTCGCTGCTGGCGACTCCAAAACAATCTCTGCTCCGGGGTCATGGGGGGGCCGATTCTGGGGCCGGACCCACTGTTCACAAGACTCCAATGGAAAATTCTCTTGCCTCACTGGTGACTGCGGCTCCGACAAGGTCGAGTGCGGCGGGAACGGCGCGAAGCCGCCAGCTACTCTGGCGGAGTTCACCCTCGATGGCGCTGGCGGCCTTGACTTCTTCGATGTGAGTTTGGTCGATGGTTACAATATTCCTATGCTGGTTGTCCCGCAGGGCGGCACCGGCGAGAAATGTGTAAGCACGGGGTGCGTTGTGGATTTGAACGGCGCGTGTCCTCAAGAGCTCAAGGTTTTCAGCGTGGACGGCGGAGAGAACGTCGCGTGTAAAAGCGCGTGTGAAGCTTTCAACGAACCGCAGTACTGTTGCAGTGGCGAGTACGCGACACCCGATACTTGCAAACCCTCTGCGTACTCGCAGGTGTTCAAAAGCGCGTGTCCACGCGCTTACAGCTACGCTTACGACGACAAAACCAGCACGTTTACATGTGCCGACGCCGATTATATCATCACATTCTGCCCTTCACCCAACACAAGTCAGAAATCAACGGAAGGTCACAACACAAGCACGCCGGCAATTAATGGCGGCAACGACACTATGGTTTACGAAGGGGCTGGATATGATCTAAGCGGCGCGTCGAGAACAACGATCCGCGGTATACTGGGGGTAGCCATTGCCACGGTGTCCATTCTTCAATCTCGGCAGCTCTTTTGA | 930 | 53.87 | MGTQIWFILYLLTIQISISGVLSTTFSIVNKCEYTVWPGILSNAGVPPLPATGFVLAAGDSKTISAPGSWGGRFWGRTHCSQDSNGKFSCLTGDCGSDKVECGGNGAKPPATLAEFTLDGAGGLDFFDVSLVDGYNIPMLVVPQGGTGEKCVSTGCVVDLNGACPQELKVFSVDGGENVACKSACEAFNEPQYCCSGEYATPDTCKPSAYSQVFKSACPRAYSYAYDDKTSTFTCADADYIITFCPSPNTSQKSTEGHNTSTPAINGGNDTMVYEGAGYDLSGASRTTIRGILGVAIATVSILQSRQLF | 309 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 313847 | 315913 | - | Cp4.1LG06g00660.1 | Cpe06g00061 | 470841 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe06g00061 | 309 | PIRSF | PR5 | 1 | 278 | IPR001938 | - | |
| Cpe06g00061 | 309 | Pfam | Thaumatin family | 30 | 246 | IPR001938 | - | |
| Cpe06g00061 | 309 | Gene3D | Thaumatin | 24 | 246 | IPR037176 | - | |
| Cpe06g00061 | 309 | ProSiteProfiles | Thaumatin family profile. | 23 | 246 | IPR001938 | - | |
| Cpe06g00061 | 309 | PANTHER | OS03G0233200 PROTEIN | 11 | 270 | IPR001938 | - | |
| Cpe06g00061 | 309 | PANTHER | BNAA02G17480D PROTEIN | 11 | 270 | - | - | |
| Cpe06g00061 | 309 | CDD | TLP-PA | 25 | 245 | - | - | |
| Cpe06g00061 | 309 | SMART | tha2 | 26 | 246 | IPR001938 | - | |
| Cpe06g00061 | 309 | SUPERFAMILY | Osmotin, thaumatin-like protein | 24 | 247 | IPR037176 | - | |
| Cpe06g00061 | 309 | PRINTS | Pathogenesis-related protein signature | 25 | 37 | IPR001938 | - | |
| Cpe06g00061 | 309 | PRINTS | Pathogenesis-related protein signature | 73 | 84 | IPR001938 | - | |
| Cpe06g00061 | 309 | PRINTS | Pathogenesis-related protein signature | 125 | 141 | IPR001938 | - | |
| Cpe06g00061 | 309 | PRINTS | Pathogenesis-related protein signature | 236 | 245 | IPR001938 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe06g00061 | Cpe11g00261 | CCT | |
| Cpe06g00061 | Cpe11g00261 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe06g00061 | Cpe-Chr6:313847 | Cpe14g01026 | Cpe-Chr14:8632746 | 4.04E-108 | dispersed | |
| Cpe01g01439 | Cpe-Chr1:8620702 | Cpe06g00061 | Cpe-Chr6:313847 | 1.04E-91 | transposed | |
| Cpe10g00668 | Cpe-Chr10:3853700 | Cpe06g00061 | Cpe-Chr6:313847 | 2.08E-101 | wgd | |
| Cpe11g00260 | Cpe-Chr11:1408672 | Cpe06g00061 | Cpe-Chr6:313847 | 2.42E-142 | wgd | |
| Cpe16g00306 | Cpe-Chr16:4963336 | Cpe06g00061 | Cpe-Chr6:313847 | 5.05E-118 | wgd | |
| Cpe02g00066 | Cpe-Chr2:340568 | Cpe06g00061 | Cpe-Chr6:313847 | 0 | wgd | |
| Cpe06g00061 | Cpe-Chr6:313847 | Cpe07g00360 | Cpe-Chr7:2326165 | 4.02E-80 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe06g00061 | - | - | csv:101214136 | 570.852 |