Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00072 ATGAGAGAACTTGCGCATTCTTTTGTTGCCTTCATTTTCATGGCGCTCTTAACTTCCCACCACAATAAACGCCGAAAAAAGCACAAAAACCCATCCCCGCCGCCGCCCTCCGCCCAATCCTCATGGGACCAGATCAAGAGCCTCCTCACCTGCAAACAGATCGAGACTTCGAGAGTTCACGAGCCGGTGAAACGCTCGCCGGCGTACTCAAAGTTGGGGTCTTCTTGCAGCTCCATATGTAGCTTTAGAGACGTGGTTCATGGCAATGCCAAAGTGGTTCATAGAGCCGACAACTCTCCCGAAAGCAGCTCCGTCGGACAGGAAACCAGGTTGCTTCATAGAAAACCCCCAAACGGTTCCTCATCTCGTTCTTTGACGGCGCCGACACCTGCCAGAACCAAACACGCTGCTTCAGCTTCCTACTCCTCTTCTTCTAGAGGAATCCAATTACGAAAGCTTTCTGGCTGTACCCAATTCCGAGGAGTTCATTATGTCCTTGTCCTCACTGTGTTCCCAAAGCCTGAAAGCTTGGAGCTTCACCAATTAGTTCGCCACGCTGTATCCGAGTTGGGTCCTGACGATTCGGGTCGAAACATCGTGGAGATAATTTTCAAGTCAAGCTGGCTGAAAAAGGACCGACCCATTTGCAAGATCCAACGGATACTAAAGGTCCACAATACCCAACGCACCATCCAACGCTTCGAGGACTGCCGTGATGCAGTGAAGACACGTGCGCTCAACAGCACCAAAAAAAACCCGCGCTGTGCGGCTGACGGTAATGAGCTGTTGAGGTTCCATTGTAGTGCCTTGTTGTGCGACCTCGGCTCACGTGGCTCTACCGGCTTATGCGGCTCGATACCCGGCTGCGGTGTCTGCACCGTCATCCGCCACGGATTCCAGTGCAAGCCCGGTGGGGTCCCTGGCGTACAGACTACTGCCAGTAGCGGTAGGGCCCACGATTCGTTCGGATGCAGCGATGGTCGGCGGCGGGCGATGTTGGTGTGCCGTGTCATCGCCGGGAGAGTCAAGCGTATGGCAGAAGATGGGGCAGGAACAACGACGACGGAGGAGGAGAACATGTCGGCGGCAGGGTCATACGACTCCGTTTCACGACACTCCGGGATGTACTCCAATCTGGAGGAGCTCATCATTTTCAATCCAAAGGCTATCCTTCCTTGTTTTGTCGTCATCTACGAAGCCCTCCAAACCTAA 1212 53.8 MRELAHSFVAFIFMALLTSHHNKRRKKHKNPSPPPPSAQSSWDQIKSLLTCKQIETSRVHEPVKRSPAYSKLGSSCSSICSFRDVVHGNAKVVHRADNSPESSSVGQETRLLHRKPPNGSSSRSLTAPTPARTKHAASASYSSSSRGIQLRKLSGCTQFRGVHYVLVLTVFPKPESLELHQLVRHAVSELGPDDSGRNIVEIIFKSSWLKKDRPICKIQRILKVHNTQRTIQRFEDCRDAVKTRALNSTKKNPRCAADGNELLRFHCSALLCDLGSRGSTGLCGSIPGCGVCTVIRHGFQCKPGGVPGVQTTASSGRAHDSFGCSDGRRRAMLVCRVIAGRVKRMAEDGAGTTTTEEENMSAAGSYDSVSRHSGMYSNLEELIIFNPKAILPCFVVIYEALQT 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 351484 353672 - Cp4.1LG06g00670.1 Cpe06g00072 470852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00072 403 Gene3D - 186 400 - -
Cpe06g00072 403 SUPERFAMILY ADP-ribosylation 187 399 - -
Cpe06g00072 403 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 25 402 - -
Cpe06g00072 403 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 25 402 - -
Cpe06g00072 403 MobiDBLite consensus disorder prediction 22 41 - -
Cpe06g00072 403 MobiDBLite consensus disorder prediction 96 141 - -
Cpe06g00072 403 MobiDBLite consensus disorder prediction 93 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02031 Cpe-Chr1:17281073 Cpe06g00072 Cpe-Chr6:351484 1.58E-24 dispersed
Cpe05g00957 Cpe-Chr5:6245315 Cpe06g00072 Cpe-Chr6:351484 7.78E-59 dispersed
Cpe06g00072 Cpe-Chr6:351484 Cpe13g00599 Cpe-Chr13:5862624 2.85E-95 dispersed
Cpe02g00074 Cpe-Chr2:377882 Cpe06g00072 Cpe-Chr6:351484 3.90E-15 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00072 - - csv:101222539 601.282