Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe06g00085 | ATGGCCGATATTGGGAGCTCAGCTTCTGGGAGCACAATGTGGTGCTCCATTCCCGAGAAGCTTCAACTCCATGCCGCCATGCTGGCCTTGCAATTTGGCTACGCTGGCTTCCACGTTGTCTCAAGGGCTGCCCTCAATATGGGCATTAGTAAACTTGTGTTCCTTGTTTACAGGAACATCATTGCCTTTCTCCTCCTCCTTCCCTTTGCATATTTCCTCGAAAAGAAGGAACGCCCTCCCATTTCTCTCAATTTCCTCCTTCAATTCTTCCTTCTTGCCCTCGTTGGGTTTGGAGCACACGTCGCCGACGTTTGCATCGGCTATACAAAACTCGGTTCCGGCCATTACATTTCTCATGGCAGCATTGCTCCGGCAAGACATCTATTTATGATAGAACAAGTGCGACTAAACAGGAAAGATGGTATAGCGAAAGTGATGGGAACAATATGCTGTGTTGCTGGGGCCACAGTGATCACTCTCTACAAAGGTCCAACCATATACAGCCCTGATGCTTCGCTGCAAGCAGCCACCATCTCACCCATTTTTGCTTCACTTGGGGACGCAAACGGCAAAAGCTGGACCCTGGGCTGCATCTTCTTGATCGGCCATTGCTTGTCCTGGTCTGGATGGCTTGTTTTGCAGGCCCCTGTTTTGAAAAAATACCCTGCTCGTCTCTCTGTCACTTCTTATACATGTTTCTTTGGGATCATCCAATTTGTCTTTATCGCTGCCATTGCTGAGAGAGATTCTCAGGCTTGGCTTTTCCACTCCGGTGGCGAAATTTTCAGCGTTCTCTATGCAGGAGTGGTAGCTTCGGGAATTGCTTTCGCGGTGCAGATATGGTGCATTCAAAGAGGTGGCCCGGTGTTCGTGGCTGTTTATCAACCAGTTCAGACACTCGTAGTCGCTGTCATGGCTTCCTTCGCGTTGGGTGAAGAGTTCTTCTTGGGAGGGTAG | 957 | 49.53 | MADIGSSASGSTMWCSIPEKLQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFLVYRNIIAFLLLLPFAYFLEKKERPPISLNFLLQFFLLALVGFGAHVADVCIGYTKLGSGHYISHGSIAPARHLFMIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPDASLQAATISPIFASLGDANGKSWTLGCIFLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVFIAAIAERDSQAWLFHSGGEIFSVLYAGVVASGIAFAVQIWCIQRGGPVFVAVYQPVQTLVVAVMASFALGEEFFLGG | 318 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 424900 | 426487 | + | Cp4.1LG06g00860.1 | Cpe06g00085 | 470865 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe06g00085 | 318 | PANTHER | WAT1-RELATED PROTEIN | 15 | 318 | IPR030184 | GO:0016021|GO:0022857 | |
| Cpe06g00085 | 318 | PANTHER | WAT1-RELATED PROTEIN | 15 | 318 | - | - | |
| Cpe06g00085 | 318 | Pfam | EamA-like transporter family | 195 | 315 | IPR000620 | GO:0016020|GO:0016021 | |
| Cpe06g00085 | 318 | Pfam | EamA-like transporter family | 27 | 159 | IPR000620 | GO:0016020|GO:0016021 | |
| Cpe06g00085 | 318 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 240 | 313 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe06g00085 | Cpe11g00228 | CCT | |
| Cpe06g00085 | Cpe11g00228 | ECH | |
| Cpe06g00085 | Cpe07g00390 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe06g00085 | Cpe-Chr6:424900 | Cpe06g00603 | Cpe-Chr6:3715739 | 5.28E-50 | dispersed | |
| Cpe11g00228 | Cpe-Chr11:1217523 | Cpe06g00085 | Cpe-Chr6:424900 | 5.03E-153 | wgd | |
| Cpe06g00085 | Cpe-Chr6:424900 | Cpe07g00390 | Cpe-Chr7:2529138 | 3.38E-129 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe06g00085 | - | - | csv:101218486 | 490.345 |