Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe06g00125 | ATGCCCTCCGCGCTTGTCGTCGCCCTCCTCCTCCTCGCCGTCTCCGCGGCCGCCAATGCCGCGAATTTCAGAGAAGCCCCCCAATTTTACAATTCCCCAGATTGCCCCTCCATTGCTGACGACCTCCAGGACCCCGATGCGAACGAACAACATCTCTGCTTCGATCGCGCCGTCCATGTCGCGATGACGTTGGATACCGCCTATATACGTGGCTCCATGGCCGCCGTTCTTTCCGTCCTCCAACACAGCTCTTGTCCCCAAAACGTAATTTTCCACTTCGTCTATTCCGCATCCGCCAACGTGTCGTCTCTACGCGCCGTCGTCTCCCGCTCATTCCCTTACCTGAAATTCCAACTCTACCCTTTCGACGAGGAGGCGGCATCGCGATTGATCTCCACGTCAATCCGATCCGCGTTGGACTGTCCGTTGAACTACGCACGTAGCTACTTGGGCAGCCTCCTTCCCACGTGCGTCGGCCGGGTCGTGTACCTTGACTCGGATCTAATCCTAGTCGACGACATTGCCAAACTCGCCGCCCACCCACTCAGCGGGGACTCGGTCCTTGCCGCGCCGGAGTACTGCAACGCCAATTTCACCACCTATTTCACGCCATCGTTTTGGTCCAACCCGTCTCTGTCTTTGACGTTTGCGAACCGGAAAGCGTGTTACTTCAACACGGGGGTTATGGTGATCGATCTGGACCGGTGGCGGGCCGGCGATTACACGGCGAAGATCGAGGATTGGATGGAATTGCAAAAGAGGATGAGAATCTACGAATTGGGGTCGTTGCCGCCGTTTTTGTTGGTGTTCAGCGGGAGGATTACTCCAGTGGAGCACCGGTGGAACCAGCACGGGCTGGGCGGCGATAATATCAGAGGGGTCTGCAGGAATCTGCACCCTGGTCCAGTAAGTTTGTTGCACTGGAGTGGGAAAGGTAAACCGTGGGATCGATTGGACGCGAACCGGCCCTGCCCTGTGGACGCCCTTTGGGCTCCATATGATTTGTTACAGACCCCATTTTCGATTGATTCTTAA | 1035 | 56.62 | MPSALVVALLLLAVSAAANAANFREAPQFYNSPDCPSIADDLQDPDANEQHLCFDRAVHVAMTLDTAYIRGSMAAVLSVLQHSSCPQNVIFHFVYSASANVSSLRAVVSRSFPYLKFQLYPFDEEAASRLISTSIRSALDCPLNYARSYLGSLLPTCVGRVVYLDSDLILVDDIAKLAAHPLSGDSVLAAPEYCNANFTTYFTPSFWSNPSLSLTFANRKACYFNTGVMVIDLDRWRAGDYTAKIEDWMELQKRMRIYELGSLPPFLLVFSGRITPVEHRWNQHGLGGDNIRGVCRNLHPGPVSLLHWSGKGKPWDRLDANRPCPVDALWAPYDLLQTPFSIDS | 344 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 627456 | 628490 | + | Cp4.1LG06g01210.1 | Cpe06g00125 | 470905 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe06g00125 | 344 | PANTHER | GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN | 10 | 344 | - | - | |
| Cpe06g00125 | 344 | PANTHER | GALACTURONOSYLTRANSFERASE-LIKE 1-RELATED | 10 | 344 | - | - | |
| Cpe06g00125 | 344 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 59 | 323 | IPR029044 | - | |
| Cpe06g00125 | 344 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 58 | 335 | IPR029044 | - | |
| Cpe06g00125 | 344 | Pfam | Glycosyl transferase family 8 | 59 | 317 | IPR002495 | GO:0016757 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe02g00145 | Cpe06g00125 | CCT | |
| Cpe06g00125 | Cpe11g00181 | CCT | |
| Cpe02g00145 | Cpe06g00125 | ECH | |
| Cpe06g00125 | Cpe11g00181 | ECH | |
| Cpe06g00125 | Cpe07g00444 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe06g00125 | Cpe-Chr6:627456 | Cpe17g00767 | Cpe-Chr17:6026426 | 3.46E-133 | dispersed | |
| Cpe10g00391 | Cpe-Chr10:2295222 | Cpe06g00125 | Cpe-Chr6:627456 | 0 | wgd | |
| Cpe11g00181 | Cpe-Chr11:982405 | Cpe06g00125 | Cpe-Chr6:627456 | 0 | wgd | |
| Cpe19g00575 | Cpe-Chr19:4823427 | Cpe06g00125 | Cpe-Chr6:627456 | 0 | wgd | |
| Cpe02g00145 | Cpe-Chr2:724870 | Cpe06g00125 | Cpe-Chr6:627456 | 0 | wgd | |
| Cpe06g00125 | Cpe-Chr6:627456 | Cpe07g00444 | Cpe-Chr7:2853315 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe06g00125 | K20893 | - | csv:101211531 | 622.083 |