Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00129 ATGCAGTCGCAATCCTTCTCTCGTGGGCTTCCCCCGGCTCTGGTCGGATTACAGGATGGCCGTTCTCGCTTTCGTCAAATGCAATTGGTAAACCGGTGGAAACAAGGAGAACAGCTTGAATTTTCATCCAAACCGCTTCAATTTGCATCCAAGTGGGATGTGTTGAAGAGGAAGAGAGGGGCGTTCATGTGCGTGGCTGATTCTAACGGGAAGCCTCAGTTGGAATCGTCTGGAAAGGAAAATCGTATATTGTATGTTAGTGCATTGAATGGAGCGGAGCCTTGTCGTGGGAAATCTGGCTCTGTCTCATTTCATGGTCTCACTCACCAGTTGGTAGAAGAGGGTAAATTGATGTCAGCTCCTTTTAGAGAAGACAAGGGCTCTCTCCTCTGGGTACTAGCTCCTGCAGTGTTTATCTCATCTTTGATTTTTCCTCAAGTTTTCCTTGGCGATCTAATCGAGGCTTACTTCAAGGAGGAGATTCTCGTAGAAGTTGTGACTTCATTGGTGTTTGAAGTCCTATTTTACGTTGGAGTTGCTGCGTTCCTGCTCGTGACCGATCGTGTTCAAAAACCATACTTGCAATTCAGCTCGAAGAGGTGGAGTCTCATTACAGGCCTTAGAGGATACTTGACAACAGCTTTCTTCATTGCTGGCTTCAAGGTTGTAGCTCCACTATTTGCCGTCTATGTAACTTGGCCGATGATTGGCCTGCCTGCCCTCGTTGCAGTGTTTCCATTTCTGGTTGGCTGTATCGTTCAGTTGGCATTTGAAACCCATGTTGATAGGCGTGGCTCAGCTGCTTGGCCACTCGTTCCAATCATTTTTGAGGTTTATAGACTTTACCAGTTGACAAAAGCTTCCCATTGTATGGAGAGGTTGATGTTCCAAATGAGAGGGCTTCCCAACACTCCAGAATTGTTGGAAAAAAGTGGAGCTATTTTTTCTATGATGATAACCTTTCAAGTCTTGGGAGTCATATGCCTCTGGTCGTTAATGACTTTTCTTTTGAGGCTTTTTCCTTCCAGACCTGTGGCAGAGAATTACTAG 1050 45.71 MQSQSFSRGLPPALVGLQDGRSRFRQMQLVNRWKQGEQLEFSSKPLQFASKWDVLKRKRGAFMCVADSNGKPQLESSGKENRILYVSALNGAEPCRGKSGSVSFHGLTHQLVEEGKLMSAPFREDKGSLLWVLAPAVFISSLIFPQVFLGDLIEAYFKEEILVEVVTSLVFEVLFYVGVAAFLLVTDRVQKPYLQFSSKRWSLITGLRGYLTTAFFIAGFKVVAPLFAVYVTWPMIGLPALVAVFPFLVGCIVQLAFETHVDRRGSAAWPLVPIIFEVYRLYQLTKASHCMERLMFQMRGLPNTPELLEKSGAIFSMMITFQVLGVICLWSLMTFLLRLFPSRPVAENY 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 636652 638583 - Cp4.1LG06g01270.1 Cpe06g00129 470909

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00129 349 PANTHER OS01G0704200 PROTEIN 37 349 - -
Cpe06g00129 349 PANTHER PROTEIN, PUTATIVE-RELATED 37 349 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00129 - - - cmax:111473667 681.404
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00129 Cpe-Chr6:636652 Cpe18g00849 Cpe-Chr18:7825274 8.41E-47 dispersed
Cpe02g00149 Cpe-Chr2:747792 Cpe06g00129 Cpe-Chr6:636652 1.95E-11 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g864 Blo01g01545 . . . . . . . . . Cma01g01883 Cma09g00179 . . . Cpe06g00129 . . . . . . . . . . . . . . . Cone4ag1881 Cone7ag1790 . . Lsi04g01632 Csa03g04175 Chy04g00543 . . . . . . . . . . . Cmo09g00175 . . . Car09g00160 . . . . . . . . . Cla05g01969 Cam05g2120 Cec05g2131 Cco05g2183 Clacu05g2108 Cmu05g1984 Cre05g2103 . . . Cme04g00633
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010511 1 1 1 0 0 1 1 1 1 1 1 1 2 1 1 1 1 2 1 1 1 1 1 1 2 1 1 2 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe06g00129 Cpe_Chr06 FPKM 2.217149 2.001523 6.469375 4.815678 1.111505 1.259765 1.166028 10.50023 10.606133 11.753979