Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00132 ATGATGAACACGCCACCTTCCTTGCCGGACCTCTCCTTGCAGATCAGCCTTCCAATGTCAACGAAGCCCAACCCACCAAGCTCAACCACCACGCATTCTGGTTGCAGTGCAAAAAGTGATTTGAGCCATAAAAATAATCTGTTCCGCTTAGGGTTTGAAGTGGGAGATATGGGTCTTCTACAGCGTCATCATCAAGCATGTAATGTCCGTTGCCGCCGCGACTTCAAAAGAAGTGTCGGTGATGTTGCGTACGGAGTAAAAAGAAGCCCCCGCGCTCCCAGAATGAGATGGACTACAACTTTACACGCTCATTTTATACACGCCGTCGAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAATCTGTATTGGAGCTTATGAATGTCAAGGATCTAACCCTCGCTCATGTCAAAAGCCATTTGCAGGTTGATGATTCTGGAAGGCCTGAGCTTGAACCAGATGCTGTTGTTTTATCTTCTTCTTCTTCATCTTCGTCAAGTAGTTTGGTAACGTCAATGCACAAGAGTTGTGACAGGACCAAGTCAAACGGCGACGTTTTCGCTAAATCCAGAGGAATTAAGGTGGAAGGAAGCAACGGAGATTATGAGAAGGCAATTGCCATGCAGCGGATTAATTTAGAGTTCACTCTTGGAAGCCCAAGTTGGCAATTGGATTATGGCGATGCAAATGAGCTTGCTCTTCTCAATTGC 711 46.41 MMNTPPSLPDLSLQISLPMSTKPNPPSSTTTHSGCSAKSDLSHKNNLFRLGFEVGDMGLLQRHHQACNVRCRRDFKRSVGDVAYGVKRSPRAPRMRWTTTLHAHFIHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQVDDSGRPELEPDAVVLSSSSSSSSSSLVTSMHKSCDRTKSNGDVFAKSRGIKVEGSNGDYEKAIAMQRINLEFTLGSPSWQLDYGDANELALLNC 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 699448 700986 - Cp4.1LG06g01440.1 Cpe06g00132 470912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00132 237 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 6 142 IPR044847 GO:0000976|GO:0006355|GO:0010158
Cpe06g00132 237 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 93 143 IPR006447 GO:0003677
Cpe06g00132 237 MobiDBLite consensus disorder prediction 158 177 - -
Cpe06g00132 237 MobiDBLite consensus disorder prediction 1 39 - -
Cpe06g00132 237 PANTHER TRANSCRIPTION FACTOR KAN4-RELATED 6 142 - -
Cpe06g00132 237 Gene3D - 92 145 - -
Cpe06g00132 237 SUPERFAMILY Homeodomain-like 90 142 IPR009057 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe06g00132 Cpe11g00176 CCT
Cpe02g00150 Cpe06g00132 CCT
Cpe06g00132 Cpe07g00452 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00132 Cpe-Chr6:699448 Cpe05g00160 Cpe-Chr5:852093 1.45E-28 dispersed
Cpe11g00176 Cpe-Chr11:957338 Cpe06g00132 Cpe-Chr6:699448 4.18E-37 wgd
Cpe02g00150 Cpe-Chr2:772129 Cpe06g00132 Cpe-Chr6:699448 1.76E-55 wgd
Cpe06g00132 Cpe-Chr6:699448 Cpe07g00452 Cpe-Chr7:2891447 8.04E-30 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49629 None None None None Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00132 - - bhj:120084780 319.316