Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00152 ATGTCCACGAGGAGTGAACATCATACAGTCCCGCTGTCCGTGCTCCTGAAGCGTGAATTGGCGATTGAGAAGATTGAGAGACCGGAAATCGTACATGGTCAGGCGAGTCAGAGTAAGAAAGGGGAGGATTTTACATTACTGAAGTCGGAATGCGAGAGAGTGGTCGGGGATGGAGTCTCTACATATTCGGTTTTTGGGCTTTTTGATGGACATAATGGATCTGCCGCTGCTATTTATACGAAGGAAAATTTGTTGAACAATGTTTTAGCTGCTATTCCATCAGATCTCAACAGAGACGAATGGGTTGCAGCATTGCCAAGGGCCTTGGTTGCTGGTTTTGTGAAGACGGACAAAGATTTCCAAGAGAAAGCACAAACATCAGGAACCACCGTCACCTTCATGATCATTGAGGGATGGGTTCTCACTGTTGCTTCTGTTGGGGATTCCCGTTGCACGTTAGAATCAGCTGAAGGTGACATCTTCTACTTATCAGCAGATCATAGGCTAGAATGCAACGAAGAAGAGAGAGAACGTATAATTGCTAGTGGCGGTGAGGTGGGCCGGCTGAATACTGGTGGTGGTGCAGAGATTGGTCCATTAAGATGCTGGCCAGGTGGCTTGTGTCTATCACGATCGATTGGTGATATGGATATTGGCGAGTTTATAGTGCCTGTACCCTACGTGAAGCAAGTTAAGCTATCTTCTACTGGTGGTAGGGTTATTATTTCAAGTGATGGTGTTTGGGATGCTTTATCAGCTGAAACTGCCTACGATTGCTGTCGGGGGATGCCGGTAGAAACTGCTGCTGCACAGATTGTTAAAGAAGCAGTACAGTCAAAGGGACTTCGCGATGATACTACATGCATTGTGATTGACATATTACCAAGGGAGAAACCATCTACTGCTTTGCCGCCAACGAAGAAGCAGGGAAAAAGAATGTTTAAATCAATGTTCCGCAAAAAGACTTCTGAATCATCTTCTCATCTTGATAAGGAATATAATGAGCCGGATGTTGTTGAGGAATTATTTGAGGAAGGATCGGCTATGCTGTCAGAAAGGTTAGAGGCGAAGTATCCTATCTGCAACATGTTTAAGCTGTTTGTATGTGCAGTATGCCAAGTTGAGATCCAACCTCGGGAGGGTATCTCCATATATGCCGGCTCATCTAGCAGAGGAAAATTGCGTGCTTGGGATGGACCTTTTCTATGCTTAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGACCTTCTGGAGAAAGACACAGCAGCGGAAGTGACTAG 1287 45.45 MSTRSEHHTVPLSVLLKRELAIEKIERPEIVHGQASQSKKGEDFTLLKSECERVVGDGVSTYSVFGLFDGHNGSAAAIYTKENLLNNVLAAIPSDLNRDEWVAALPRALVAGFVKTDKDFQEKAQTSGTTVTFMIIEGWVLTVASVGDSRCTLESAEGDIFYLSADHRLECNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSSTGGRVIISSDGVWDALSAETAYDCCRGMPVETAAAQIVKEAVQSKGLRDDTTCIVIDILPREKPSTALPPTKKQGKRMFKSMFRKKTSESSSHLDKEYNEPDVVEELFEEGSAMLSERLEAKYPICNMFKLFVCAVCQVEIQPREGISIYAGSSSRGKLRAWDGPFLCLSCQEKKEAMEGKRPSGERHSSGSD 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 825895 830623 + Cp4.1LG06g01470.1 Cpe06g00152 470932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00152 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 423 - -
Cpe06g00152 428 SMART PP2C_SIG_2 54 293 IPR001932 -
Cpe06g00152 428 CDD PP2Cc 39 293 IPR001932 -
Cpe06g00152 428 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Cpe06g00152 428 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
Cpe06g00152 428 SMART PP2C_4 17 291 IPR001932 -
Cpe06g00152 428 Pfam Protein phosphatase 2C 50 278 IPR001932 -
Cpe06g00152 428 Gene3D - 31 301 IPR036457 -
Cpe06g00152 428 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 423 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00172 Cpe06g00152 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00152 Cpe-Chr6:825895 Cpe09g00317 Cpe-Chr9:1882819 2.92E-180 dispersed
Cpe02g00172 Cpe-Chr2:879240 Cpe06g00152 Cpe-Chr6:825895 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00152 - - csv:101211986 812.372