Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00185 ATGGCGGACAAGGAGAATATATTTCGTCTCACTCGGGCTTCTAAGAAGAGGTTGGCCGAGGCTGCTACCCCCGACGACCGCTCCTCCAACAAGAGGCGGGTCGTTCTTGGAGAGCTTCCTATTTTGCAGAATGCTTCTTCTTCCCTCAATCGGAAGTCCAGGTCTAGAGCTAGCAGGCAGAGACGGAGACTGAAATCAAGGGATATTGCGGGGACAAGTGCTGCTGCTGCTGCTGCTGAAATCAATCCACTTCCGCAACGTGATGTCACGTTATCAGATGAGGGCAATTCGGAAGACCCCCAAATGTGCAGGGGTTACGCCTCTGATATTTATGACTATCTTCGCGCAACGGAGACTGATCCAAGAAGAAGGCCCCTACCAGATTACATCGGGACGGTGCAAAAAGATATTAGTGCCAATATGAGGGGAATTCTGGTGGATTGGTTGGTTGAAGTTGCAGAAGAATACAAACTAGTTTCAGATACACTATACCTCTCTGTTTCATATGTTGACAGATACTTATCTCTAAATGCAATCAGCAGGCAAAAACTTCAGTTGGTGGGAGTTTCTGCCATGCTCATTGCCTCAAAGTATGAAGAAATTAGTCCTCCACATGTTGAAGAATTTGTTTATATCACCGACAATACCTACAATAGAGAAGAGGTGGTTGAGATGGAGGCTGATATATTAAAATCACTGGAATTTGAACTTGGAGATCCCACAATAAAGACATTTTTAAGGCAAGTGCAGTGGAGATTCACAATGGTTGCTCAAGAGACTTATGAGTTTAATACATTGCAATTTGAATTCTTGGGCTACTATCTTGCTGAGTTAAGCCTACTAGACTACAACTGTGTCAAATTTTTACCGTCCCTCGTTGCTGCATCTGTTATATTTCTAGCACGATTTATGATCCAACCTAAGAAGCATCCTTGGATCTCCAGGTTGGAGCATTTTACTGGATATAAGCCAGCTGATATGAAAGACTGCATTCTACTCGTACATGATTTATACCTTAGTAGAAGAGGAGGCGCTTTGGCAGCTATAAGGGAGAAATACAAACAACACAAGTTCAAATTTGTGTCTGTCATGCCTTCACCTCCAGAGATTCCTATTCCATATTTTGAAGATGTTAGAATATGA 1143 43.13 MADKENIFRLTRASKKRLAEAATPDDRSSNKRRVVLGELPILQNASSSLNRKSRSRASRQRRRLKSRDIAGTSAAAAAAEINPLPQRDVTLSDEGNSEDPQMCRGYASDIYDYLRATETDPRRRPLPDYIGTVQKDISANMRGILVDWLVEVAEEYKLVSDTLYLSVSYVDRYLSLNAISRQKLQLVGVSAMLIASKYEEISPPHVEEFVYITDNTYNREEVVEMEADILKSLEFELGDPTIKTFLRQVQWRFTMVAQETYEFNTLQFEFLGYYLAELSLLDYNCVKFLPSLVAASVIFLARFMIQPKKHPWISRLEHFTGYKPADMKDCILLVHDLYLSRRGGALAAIREKYKQHKFKFVSVMPSPPEIPIPYFEDVRI 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 995417 999399 - Cp4.1LG06g01980.1 Cpe06g00185 470965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00185 380 SMART cyclin_7 147 231 IPR013763 -
Cpe06g00185 380 SMART cyclin_7 244 336 IPR013763 -
Cpe06g00185 380 Pfam Cyclin, N-terminal domain 109 237 IPR006671 -
Cpe06g00185 380 Gene3D - 123 238 - -
Cpe06g00185 380 SUPERFAMILY Cyclin-like 240 369 IPR036915 -
Cpe06g00185 380 MobiDBLite consensus disorder prediction 1 33 - -
Cpe06g00185 380 SUPERFAMILY Cyclin-like 98 237 IPR036915 -
Cpe06g00185 380 MobiDBLite consensus disorder prediction 1 77 - -
Cpe06g00185 380 SMART Cyclin_C_2 240 367 IPR004367 -
Cpe06g00185 380 CDD CYCLIN 141 230 IPR013763 -
Cpe06g00185 380 Pfam Cyclin, C-terminal domain 240 367 IPR004367 -
Cpe06g00185 380 CDD CYCLIN 240 335 IPR013763 -
Cpe06g00185 380 PIRSF Cyclin_A_B_D_E 3 371 IPR039361 -
Cpe06g00185 380 ProSitePatterns Cyclins signature. 142 173 IPR006671 -
Cpe06g00185 380 PANTHER CYCLIN-A3-1-RELATED 24 378 - -
Cpe06g00185 380 PANTHER CYCLINS 24 378 IPR039361 -
Cpe06g00185 380 Gene3D - 109 363 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe06g00185 Cpe11g00133 CCT
Cpe02g00206 Cpe06g00185 CCT
Cpe02g00206 Cpe06g00185 ECH
Cpe06g00185 Cpe11g00133 ECH
Cpe06g00185 Cpe07g00503 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00185 Cpe-Chr6:995417 Cpe13g00635 Cpe-Chr13:6074518 1.27E-104 dispersed
Cpe11g00133 Cpe-Chr11:725289 Cpe06g00185 Cpe-Chr6:995417 3.78E-160 wgd
Cpe15g00455 Cpe-Chr15:5624271 Cpe06g00185 Cpe-Chr6:995417 9.54E-91 wgd
Cpe02g00206 Cpe-Chr2:1058884 Cpe06g00185 Cpe-Chr6:995417 0 wgd
Cpe04g00309 Cpe-Chr4:3874502 Cpe06g00185 Cpe-Chr6:995417 1.07E-102 wgd
Cpe06g00185 Cpe-Chr6:995417 Cpe07g00503 Cpe-Chr7:3300135 3.84E-169 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00185 K06627 - csv:101207493 640.958