Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00200 ATGGAAAATTATTTGAACGAGAATTTCGGTGAAGTAAAGCCGAAGAAAACGTCGGAAGAAGCGCTTCAGAGATGGAGGCAGCTTTGCTGGTTGGTGAAGAATCGGAAACGGAGGTTTCGATTTACTGCCAATCTATCTAAACGATTTGAGGCCGATGCTATTAGACGCTCCAATCAGAATGAGGCAGATGAAAGGCTCGTCAATTTGAAATTGTTAGCCTGGTGTTTCCCTTGGGTTGATATCATGGGATCTTCTGTAATTGTCTGGATTGAAAGACTGGAATGTTTCCTTATTTTTCCACAAATTTCTATTGTGCATTGGAGTTCAACCCTGAACAACAACTACATCCCGTTATACGATTTTCCTTTCTATGCTGTTGCTTCTGATTTTGATGCTCAATTCTTCTTTTTTCAACAACCGTTGCAGGAGAAGTTTAGAGTTGCAGTTTTGGTTTCACAAGCAGCGCTTCAGTTCATCAATGGGTTGGATTTGTCTCCTGACTACGTTGTGCCTGAAGAGGTCAGGCAAGCAGGTTTTGAAATCTGTGCAGATGAAGCGGGCTCCATTGTTGATGGACATGACGTGAAGAAGCTGAAGATTCATGGGGGTGCTGAGGGTATTGCAACTAAGCTTGGCACATCAACGGAGACAGGCATTCCTACTACAGACCATTTGATCAAGAAAAGACAACACATTTATGGAATTAACAAATTCACCGAAAGCCCACCTCGAGGATTTTGGCTCTTTGTTTGGGAAGCTCTCCAGGATACGACCCTCATGATACTCGCTTTCTGTTCTGTTGTTTCCCTTTTTGTTGGCATAGTGATGGAAGGATGGCCAAAGGGTGCTCATGATGGGCTTGGCATTGTTGCGAGTATCTTGCTTGTTGTATTTGTCACTGCCACCAGTGACTATAGGCAATCGCTTCAGTTCATGGATTTGGACAGGGAAAAGAAGAAAATTAACGTTCAGGTTACCAGAAATGGGCTGAGACAAAAGATTTCTATATACGAACTTCTTCCTGGTGATATTGTTCATCTTGCCGTGGGTGATCAGGTACCAGCAGATGGACTTTTCGTTTCGGGGTATTCTCTTCTGATAAATGAATCTAGTTTAACAGGTGAGAGCGAACCTGTAAACGTAAGCTCTCAAAATCCTTTCCTCTTGTCCGGAACAAAGGTTCAGGATGGTTCGTGTAAGATGGTTGTGACTTCTGTTGGCATGAGAACCCAATGGGGCAAACTGATGGCCACTCTTAGTGAAGGTGGAGATGATGAGACTCCTTTGCAGGTAAAGCTCAATGGGGTGGCAACAATTATTGGTAAAATAGGCCTGTTTTTTGCTGTCATAACTTTCGCTGTATTGGTTCAAGGACTGTTCACTCGCAAGCTACAAGAAGGGTCTTACTTGAGCTGGTCCGGAGATGAAGCAATGGAAGTCTTGGAATTCTTTGCTGTCGCCGTAACCATTGTTGTGGTTGCAGTGCCTGAAGGGCTGCCTTTGGCAGTGACACTGAGCCTTGCTTTTGCCATGAAAAAGATGATGAACGACAAGGCACTTGTCAGGAACTTGGCTGCTTGTGAGACAATGGGATCAGCTACTACTATTTGTAGTGACAAAACTGGGACATTGACGACTAACCACATGACTGTTGTGAAAGCCTGCATATGCAGCAAGGTCAAGGAAGTTAGCAATTCTAGCAAATGTTCCGATTATCGTTCGGAGCTTCCCGATTCCGCTGTTGATATTTTACTACAATCAATATTTAACAACACTGGTGGAGAAGTCGTCAAGAACAAAGATGGCAAGAATGAGATACTTGGGACGCCCACGGAGTCTGCTCTACTGGAATTCGGCCTTCTGCTTGGTGGGGATTTCCAAGAAGAACGCCAAAAGTCAAAAATCGCGAGAGTCGAGCCCTTCAATTCTGTGAAGAAGCGAATGGGGGTTGTTTTGGAGCTCCCGGCCGGTGGCTTCCGCGCGCACAGCAAAGGCGCATCAGAGATAGTTTTAGCTTCATGCGATAAAGTTCTTGACTCCAACGGTGAAGCAATTCCTCTCAATGAAGAGTCCACCGACTTTTTGAAGGAAACCATCGAAGAATTTGCGGGTGAAGCTCTTCGAACTTTGTGCCTGGCTTATATGGACATTGAAGGCGATTACAAGTCTGAGAGTACGATTCCCGCTAGTGGCTACACGTGCATAGGAATTGTAGGTATCAAGGATCCCGTTCGTCCGGGTGTTAAGGAGTCCGTTGCAATTTGCAAGGCCGCCGGTATTACCGTACGGATGGTTACGGGAGATAACATCACCACCGCCAAAGCAATTGCCAGGGAATGTGGGATTTTGACTGACGATGGTATAGCAATTGAAGGTCCTGAATTCCGGGAGAAAAAGGAGGAAGAATTGAGTGAAATAGTACCAAAAATTCAGGTTATGGCTCGATCTTCACCAATGGATAAACATACTCTTGTAAAGCACTTACGAACCACTTTTCAAGAAGTCGTTGCAGTTACAGGGGATGGAACAAATGATGCTCCGGCACTCCACGAAGCAGATATTGGATTAGCTATGGGCATTGCTGGAACTGAGGTTGCAAAAGAGAGTGCTGATGTAATAATTCTTGACGACAACTTCTCTACAATTGCTACTGTTGCTAAATGGGGTCGTTCAGTCTACATAAATATCCAAAAGTTTGTCCAGTTTCAGCTAACAGTGAACGTGGTTGCACTTCTTGTCAATTTTTCTTCAGCCTGTTTGACAGGAAATGCTCCCCTCACTGCTGTGCAACTGCTTTGGGTGAACATGATAATGGACACACTCGGAGCACTTGCATTGGCAACTGAGCCTCCTACTGATGACTTGATGAAGAGACTGCCAGTTGGTCGGAAAGGAAATTTCATTAGCAATGTGATGTGGAGAAATATAATAGGGCAGTCATTATATCAGTTTGTTATAATTTGGTATCTCCAAACAAGAGGACAGGCTCTTTTTCATCTTGATGGCCCCGACTCTGGATTGATATTGAATACACTGATTTTCAATGCATTCGTCTTTTGTCAGGTTTTCAATGAGATAAGCTCAAGAGACATGGAAAAGATAAATGTGTTTGAAGGAATATTGAAGAACTACGTGTTTGTGGTAGTGCTTGCTTGCACTGTCCTTTTCCAGATCATTATCATCCAATACCTGGGAACATTTGCGAACACCTATCCTCTTAACTTCCAGCAATGGTTTGTCACCGTGTTATTTGGATTTCTTGGCATGCCAATTGCAGCAGCTTTGAAGATGATTCCGGTAGGATCAGACTGA 3312 44.05 MENYLNENFGEVKPKKTSEEALQRWRQLCWLVKNRKRRFRFTANLSKRFEADAIRRSNQNEADERLVNLKLLAWCFPWVDIMGSSVIVWIERLECFLIFPQISIVHWSSTLNNNYIPLYDFPFYAVASDFDAQFFFFQQPLQEKFRVAVLVSQAALQFINGLDLSPDYVVPEEVRQAGFEICADEAGSIVDGHDVKKLKIHGGAEGIATKLGTSTETGIPTTDHLIKKRQHIYGINKFTESPPRGFWLFVWEALQDTTLMILAFCSVVSLFVGIVMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFMDLDREKKKINVQVTRNGLRQKISIYELLPGDIVHLAVGDQVPADGLFVSGYSLLINESSLTGESEPVNVSSQNPFLLSGTKVQDGSCKMVVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLFTRKLQEGSYLSWSGDEAMEVLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICSKVKEVSNSSKCSDYRSELPDSAVDILLQSIFNNTGGEVVKNKDGKNEILGTPTESALLEFGLLLGGDFQEERQKSKIARVEPFNSVKKRMGVVLELPAGGFRAHSKGASEIVLASCDKVLDSNGEAIPLNEESTDFLKETIEEFAGEALRTLCLAYMDIEGDYKSESTIPASGYTCIGIVGIKDPVRPGVKESVAICKAAGITVRMVTGDNITTAKAIARECGILTDDGIAIEGPEFREKKEEELSEIVPKIQVMARSSPMDKHTLVKHLRTTFQEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRLPVGRKGNFISNVMWRNIIGQSLYQFVIIWYLQTRGQALFHLDGPDSGLILNTLIFNAFVFCQVFNEISSRDMEKINVFEGILKNYVFVVVLACTVLFQIIIIQYLGTFANTYPLNFQQWFVTVLFGFLGMPIAAALKMIPVGSD 1103
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1073086 1078783 - Cp4.1LG06g02000.1 Cpe06g00200 470980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00200 1103 PRINTS P-type cation-transporting ATPase superfamily signature 537 551 - -
Cpe06g00200 1103 PRINTS P-type cation-transporting ATPase superfamily signature 758 768 - -
Cpe06g00200 1103 PRINTS P-type cation-transporting ATPase superfamily signature 863 875 - -
Cpe06g00200 1103 PRINTS P-type cation-transporting ATPase superfamily signature 736 747 - -
Cpe06g00200 1103 PRINTS P-type cation-transporting ATPase superfamily signature 368 382 - -
Cpe06g00200 1103 PRINTS P-type cation-transporting ATPase superfamily signature 839 858 - -
Cpe06g00200 1103 Gene3D - 17 63 - -
Cpe06g00200 1103 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Cpe06g00200 1103 Pfam Cation transporter/ATPase, N-terminus 202 269 IPR004014 -
Cpe06g00200 1103 PANTHER CALCIUM-TRANSPORTING ATPASE 138 1100 - -
Cpe06g00200 1103 Gene3D - 225 420 - -
Cpe06g00200 1103 CDD P-type_ATPase_Ca_PMCA-like 228 972 - -
Cpe06g00200 1103 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 633 784 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe06g00200 1103 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 475 560 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe06g00200 1103 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 805 920 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe06g00200 1103 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 289 460 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe06g00200 1103 Pfam Cation transporting ATPase, C-terminus 924 1098 IPR006068 -
Cpe06g00200 1103 Gene3D - 252 1098 - -
Cpe06g00200 1103 Gene3D - 534 884 IPR023214 -
Cpe06g00200 1103 PRINTS H+-transporting ATPase (proton pump) signature 871 896 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe06g00200 1103 PRINTS H+-transporting ATPase (proton pump) signature 839 855 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe06g00200 1103 PRINTS H+-transporting ATPase (proton pump) signature 695 713 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe06g00200 1103 SUPERFAMILY HAD-like 535 944 IPR036412 -
Cpe06g00200 1103 SUPERFAMILY Calcium ATPase, transduction domain A 322 417 IPR008250 -
Cpe06g00200 1103 Pfam E1-E2 ATPase 320 515 - -
Cpe06g00200 1103 Pfam Cation transport ATPase (P-type) 598 677 - -
Cpe06g00200 1103 SFLD C1.7: P-type atpase like 519 891 - -
Cpe06g00200 1103 SMART Cation_ATPase_N_a_2 203 274 IPR004014 -
Cpe06g00200 1103 PANTHER CATION TRANSPORTING ATPASE 138 1100 - -
Cpe06g00200 1103 PANTHER CATION TRANSPORTING ATPASE 3 66 - -
Cpe06g00200 1103 PANTHER CALCIUM-TRANSPORTING ATPASE 3 66 - -
Cpe06g00200 1103 SUPERFAMILY Calcium ATPase, transmembrane domain M 202 1099 IPR023298 -
Cpe06g00200 1103 Gene3D - 547 743 IPR023299 GO:0000166
Cpe06g00200 1103 SFLD p-type atpase 519 891 IPR044492 -
Cpe06g00200 1103 Pfam haloacid dehalogenase-like hydrolase 735 853 - -
Cpe06g00200 1103 ProSitePatterns E1-E2 ATPases phosphorylation site. 539 545 IPR018303 -
Cpe06g00200 1103 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 191 1100 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Cpe06g00200 1103 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 543 748 IPR023299 GO:0000166
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00220 Cpe06g00200 CCT
Cpe02g00220 Cpe06g00200 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00200 Cpe-Chr6:1073086 Cpe17g00875 Cpe-Chr17:6800597 0 dispersed
Cpe07g00925 Cpe-Chr7:8272260 Cpe06g00200 Cpe-Chr6:1073086 1.05E-18 dispersed
Cpe11g00959 Cpe-Chr11:8104297 Cpe06g00200 Cpe-Chr6:1073086 1.75E-21 dispersed
Cpe03g00476 Cpe-Chr3:2792960 Cpe06g00200 Cpe-Chr6:1073086 1.93E-10 transposed
Cpe13g00519 Cpe-Chr13:5307701 Cpe06g00200 Cpe-Chr6:1073086 3.74E-12 transposed
Cpe19g00675 Cpe-Chr19:5367407 Cpe06g00200 Cpe-Chr6:1073086 8.07E-20 wgd
Cpe02g00220 Cpe-Chr2:1131171 Cpe06g00200 Cpe-Chr6:1073086 1.65E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00200 K01537 - csv:101221694 1767.28