Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00210 TTGAATTTCTCCGATGGCCACTCCCGTTTTCCGGTGGTCTGTTGTCTTCTTCTTCTTCCCTGTTCTTCTTTTTCTGGTGGTCTCCTCCGCTGCCGCAGCTTCATCTTGGACTGTGAAGTATCTGCCTGGATTCCCAGATATGTGGGAGTGGGCGATTCGGAGGAAGTTCAGCAGTTTTATTACTTTGTCAAGTCCCAAGGAAACCCCAAAACTGATCCTCTGATGACTTGGTTTACCGGCGGCCCTGGTTGCTCTGCTCTCTGTGGGCTTGCCTTTGAAGTTGGTCCTATAAATTTCAAGGTAGAGCCATACAATGGAAGCCTACCTCAACTAATCTTGAATCCTTTTACATGGACCAAGAAAGCTAGTATTCTCTTTATAGATTCGCCTGTGGGCACTGGATTTTCGTATAGTCGAACTCCACAAGGTTCTAAGAAAGGAGATCTTGGACAAGTTCAACGAAATCATCAATTTTTGAGAAAGTGGCTGCTAGATCATCCCCAATTTTTATCTAATCCATTTTATGTTGGTGGAGACTCATATACTGGAAATAAAGATGCTGTCCCAGTTATAAACCTTCAGGGTTACATATTGGGAAATCCAGTCACTGTACAAAAAACAAATGATAATTCCAGGGTTCCATATGCTCATAGAATGAACCTCATCCCCACTCAACTATACGAGCTATTGAGAAGCAATTGCAAAGGAGAATATGAGAACATTGAGGCAGATAACATAGAGTGCATGAAACATGTAGCAGCCTACAAAAAGTGTGTGAGCAGAATCAATCAATGGTGTATTACGTGCCCTTTTTGTGAGGATGTTTCCTCAGCGCCAAATGATGATAAATTTGGACGGCGGAGATCTCTCTTCAACTCCTCTGAAGAACAACTGCTGCTTGCTCCAAGAGTGTTGCCTCCGCCTCTTCTCTACTGTCAAGAGTATAAATACTTCCTTAGTTATTACTGGGCTAACGATTATCGAGTCAGAAAAGCACTTCATGTACGCGAGGGAACTAAAGGAGAATGGACAAGATGTCAGAGTCGTAAAGATTATCAATACGAAATTAAGAGCTCGGTTCCTTACCATGCAAAACTCAGTTCGAAAGGATATCGATCTTTGATTTTTAGTGGAGATCATGATCTGATGGTGCCGGTTATAAATACAGCAGAGTGGATCGAATCTCTCAATTATCCTGTTGTTGATAATTGGAGAACTTGGCTTGGGATGGATGATCAAATATTGGGATATGTGGGCGTCGGGGAATTGGAGGAAGTGCAATTGTTTTATTATTTCGTGAAATCCGAAGGGAATCCCAGGACGGATCCTCTGCTTTTTTGGCTCACCGGAGGCCCCGGCTGCTCTGCTTTTACTGGACTCGCCTTTGAAATTGGTCCTTTAAATTTCAAGCTTGAGCTATACAATGGGAGCTTGCCCCAACTATTCTGGAACCCTTATTCATGGACAAAGGTGAGATTTTTTTCTGAAAATTTGCCTTTCAATCATAACCACCATTTGCCGGTGCAAACTGGATTTTCGTACGGCACAACTCCACGATCTCTGGAGGTAGGAGATTCCCGCGTTGTTCATCATTCTATTCAATTTTTAAAAAAGTGGTTAATTGATCACCCAGAATTTATCTCTAATCCATTTTATGTGGGTGGAGATTCATACTCTGGTATGCTATTGCTCATAAAGTTTCAGAAGGGATATATATTGGGAAATCCAGTTACCATTCGTAATTCAAATACCAATTTTCAAATTCCTTATGCTCATAGAATGGCTCTTATATCCGATGAATTATTCGAGTCATTGACCTCTAGTTGCAAGGGAGAGTACGTGAATATTGATCCGAGCAATGTGGATTGTTTACGACATTATAAAACGTACCAAAAGGTATCTAGCTACGTTATACTTGAAGCAACAATGAGAAATGGGTATAGGTATTGTGTTTCAAATATCGAGAGAGCTTCAATTTTGTTGCCAAAATGTACGTTTATTTCTCCGAAGCAACGAGAAGGTGGAGATCATGGGAGATTGCTATACGATGCCTCTGGACTGTCCCTTGATCCCGAGCCATCGCTTTCTACTCTCGATTGTCCGACCTATAAATTCAAACTTGCTACTTATTGGGCAAACAACGATCAAGTTCGAAAAGCACTTCACATACGAGAGGGAAGCGTGGGAGAATGGATGAGATGTAATGTTCAGGACAGTTACAAGTACGATTTCCAGAGTGCTTTTCCTTATCATGTGGCCCTTAGTTCTAAAGGCTACCGGTCTTTGATCTATAGCGGGGATCACGATATGATGGTACCACATATGGACACTGAAGCATGGATTAAAAAATTAAATTACTCTATTGTAGATGACTGGAGACCTTGGTTTATCCAAAACCAAGTAGCGGGTGGGGATCACGATATGGTGGTACCGCATATGGACACAGAAGCATGGATTAAAAAATTAAATTACTCTATTGTGGATGACTGGAGACCTTGGTTTATCCAAAACCAAGTGGCGGGATATACAAGAAAATATGCAAATAATATGACATTTGCAACCATAAAAGGTGGAGGGCACACAGCAGAATACACACAAAAGGAATGCAGTATACTGTTCAGTAGATGGATTAGTGGAGAACCCTTATAA 2649 41.45 LNFSDGHSRFPVVCCLLLLPCSSFSGGLLRCRSFILDCEVSAWIPRYVGVGDSEEVQQFYYFVKSQGNPKTDPLMTWFTGGPGCSALCGLAFEVGPINFKVEPYNGSLPQLILNPFTWTKKASILFIDSPVGTGFSYSRTPQGSKKGDLGQVQRNHQFLRKWLLDHPQFLSNPFYVGGDSYTGNKDAVPVINLQGYILGNPVTVQKTNDNSRVPYAHRMNLIPTQLYELLRSNCKGEYENIEADNIECMKHVAAYKKCVSRINQWCITCPFCEDVSSAPNDDKFGRRRSLFNSSEEQLLLAPRVLPPPLLYCQEYKYFLSYYWANDYRVRKALHVREGTKGEWTRCQSRKDYQYEIKSSVPYHAKLSSKGYRSLIFSGDHDLMVPVINTAEWIESLNYPVVDNWRTWLGMDDQILGYVGVGELEEVQLFYYFVKSEGNPRTDPLLFWLTGGPGCSAFTGLAFEIGPLNFKLELYNGSLPQLFWNPYSWTKVRFFSENLPFNHNHHLPVQTGFSYGTTPRSLEVGDSRVVHHSIQFLKKWLIDHPEFISNPFYVGGDSYSGMLLLIKFQKGYILGNPVTIRNSNTNFQIPYAHRMALISDELFESLTSSCKGEYVNIDPSNVDCLRHYKTYQKVSSYVILEATMRNGYRYCVSNIERASILLPKCTFISPKQREGGDHGRLLYDASGLSLDPEPSLSTLDCPTYKFKLATYWANNDQVRKALHIREGSVGEWMRCNVQDSYKYDFQSAFPYHVALSSKGYRSLIYSGDHDMMVPHMDTEAWIKKLNYSIVDDWRPWFIQNQVAGGDHDMVVPHMDTEAWIKKLNYSIVDDWRPWFIQNQVAGYTRKYANNMTFATIKGGGHTAEYTQKECSILFSRWISGEPL 882
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1107553 1123204 - Cp4.1LG06g02200.1 Cpe06g00210 470990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00210 882 SUPERFAMILY alpha/beta-Hydrolases 413 803 IPR029058 -
Cpe06g00210 882 Pfam Serine carboxypeptidase 413 803 IPR001563 GO:0004185|GO:0006508
Cpe06g00210 882 Pfam Serine carboxypeptidase 47 408 IPR001563 GO:0004185|GO:0006508
Cpe06g00210 882 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Cpe06g00210 882 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Cpe06g00210 882 PRINTS Carboxypeptidase C serine protease (S10) family signature 850 863 IPR001563 GO:0004185|GO:0006508
Cpe06g00210 882 PRINTS Carboxypeptidase C serine protease (S10) family signature 539 564 IPR001563 GO:0004185|GO:0006508
Cpe06g00210 882 Gene3D alpha/beta hydrolase 44 413 IPR029058 -
Cpe06g00210 882 Gene3D alpha/beta hydrolase 414 803 IPR029058 -
Cpe06g00210 882 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 414 803 IPR001563 GO:0004185|GO:0006508
Cpe06g00210 882 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 800 880 IPR001563 GO:0004185|GO:0006508
Cpe06g00210 882 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 47 408 IPR001563 GO:0004185|GO:0006508
Cpe06g00210 882 Gene3D - 804 879 - -
Cpe06g00210 882 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 414 803 - -
Cpe06g00210 882 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 800 880 - -
Cpe06g00210 882 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 47 408 - -
Cpe06g00210 882 SUPERFAMILY alpha/beta-Hydrolases 47 418 IPR029058 -
Cpe06g00210 882 SUPERFAMILY alpha/beta-Hydrolases 801 881 IPR029058 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00229 Cpe06g00210 CCT
Cpe02g00229 Cpe06g00210 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00210 Cpe-Chr6:1107553 Cpe12g01143 Cpe-Chr12:9401184 1.04E-71 dispersed
Cpe02g00229 Cpe-Chr2:1172604 Cpe06g00210 Cpe-Chr6:1107553 1.21E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00210 K16296 - csv:101207623 477.248