Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00220 ATGGCGCCCTCGTTTGATTGGTGGGGAAAAGACACTCGCAGAGGAACCCCTGTTGTTGTTAAGATGGAGAATCCAAATTGGTCGATGGTTGAGCTCGAGGGTCCGTCGAAGGATGATTTTCTCATCGCGGGTGAGTCGCCAACGGGCCGGACCAGAGAGAAAGCCCGAGGGAAAAACGCTAAACAACTCACGTGGGTCCTCCTCCTCAAGGCCCACAAGGCCGCCGGTTGTTTAACCTCCATTGGCTCTGCAATGGTGGACCTTGTCGCCACTGTAAGACGCCGCGTTGCTTCGGGACGGACCGACGAGGACGAGGACGACGCCGACGCCGACGCCGACAATGACGTCACTGGTAAAGAGAACCCGACAGTGAAAACGAGATTCTATTCTTGTATCAAGGTGTTTTTATGGCTGTCGGTGCTTCTGTTGGGTTTTGAGGTGGCGGCCTTCTTCAAGGGCTGGCATTTCGTTTCTCCAAACTTTCAATTGGATTATCTCTGGGCATCACCTTGGGGTTTCAAGGGAGCTTTTGGTTGGATTTACTCTCAGTGGGTATCGATTCGAGTGGATTATTTAGCTCCTCCTCTGCAATTCTTAACCAATGCCTGTGTCGTACTGTTCATCAGTCAAAGCTTGGATCGTTTAATCTTATGTTTGGGTTGTTTCTGGATCCGATTCAAGAAAATTCAACCAGTTCTTAAACCTGGAGATGAAGACCTTGAATCCGGCGAGAAGGGCTATTTCCCAATGGTTCTTGTTCAGATCCCCATGTGCAATGAAAAAGAGGTTTATCAGCAATCAATTGCTGCTATCTGCAATTTGGACTGGCCAAAAACCAATCTGTTGATTCAAGTTCTTGATGATTCTGATGATCCAACTACCCAATTGCTGATTAAAGAGGAGGTTCATAAATGGCAGCAAGAAGGTGCCAACATTGTTTATCGTCATCGAGTCATTCGAGATGGTTACAAGGCTGGCAACCTCAAATCCGCTATGAATTGTAGCTATGTCAAAGACTACGAATTCGTTGCCATTTTCGACGCCGATTTTCAACCGACACCCGATTTCCTTAAAAGAACTGTTCCTCATTTCAAGTGCCAGTGTGAGCTACCAGAATCTTATGAAGCTTATAGAAAACAACAACATAGATGGCATTCTGGCCCAATGCAGTTGTTTCGCCTTTGTCTGCCTGCTATTATTCGATCGAAGATTAGTGTATGGAAGAAGTTCAACTTAATCTTCCTCTTCTTTTTGCTCAGAAAATTGATACTGCCCTTCTATTCGTTTACACTTTTCTGCATAATTCTCCCGATGACAATGTTCGTTCCCGAGGCCGAGCTACCCTTTTGGGTTGTCTGCTATATCCCAGCCATGATGTCGTTTCTAAACATTCTGCCTGCCCCAAAATCCTTCCCTTTCATTGTCCCTTACCTCCTTTTTGAGAACACAATGTCAGTCACCAAGTTCAATGCCATGATCTCAGGCCTCTTCCAGCTCGGTAGTGCCTACGAATGGGTTGTTACAAAGAAATCTGGCCGATCGTCGGAGGGTGATCTCGTCTCCTTGGTAGAGAGAGAGCAGAAGCATCAGAGAGGGGCTTCGGTGCCCGGCCTAGAAGAGATGAAGGAAGAATTTGAGAAGCAAGAGCAGAAAGGCTCTTTGCAAAAGAAGCACAATCGAATATACGTGAAAGAGCTCGCATTAGCTTTCCTCCTCCTAACTGCCTCGGCACGGAGCCTTCTATCTGCACAAGGAATCCATTTCTACTTCTTGTTGTTCCAGGGGATCTCGTTCCTGCTGGTCGGGTTGGACTTGGTCGGCGAACAGATAGGTTGA 1836 47.11 MAPSFDWWGKDTRRGTPVVVKMENPNWSMVELEGPSKDDFLIAGESPTGRTREKARGKNAKQLTWVLLLKAHKAAGCLTSIGSAMVDLVATVRRRVASGRTDEDEDDADADADNDVTGKENPTVKTRFYSCIKVFLWLSVLLLGFEVAAFFKGWHFVSPNFQLDYLWASPWGFKGAFGWIYSQWVSIRVDYLAPPLQFLTNACVVLFISQSLDRLILCLGCFWIRFKKIQPVLKPGDEDLESGEKGYFPMVLVQIPMCNEKEVYQQSIAAICNLDWPKTNLLIQVLDDSDDPTTQLLIKEEVHKWQQEGANIVYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKCQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISVWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPFWVVCYIPAMMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEREQKHQRGASVPGLEEMKEEFEKQEQKGSLQKKHNRIYVKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLVGEQIG 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1169376 1172881 - Cp4.1LG06g02180.1 Cpe06g00220 471000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00220 611 Pfam Glycosyl transferase family 2 254 389 IPR001173 -
Cpe06g00220 611 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 241 386 IPR029044 -
Cpe06g00220 611 PANTHER - 365 610 - -
Cpe06g00220 611 PANTHER - 5 365 - -
Cpe06g00220 611 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 5 365 - -
Cpe06g00220 611 SUPERFAMILY Nucleotide-diphospho-sugar transferases 251 433 IPR029044 -
Cpe06g00220 611 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 365 610 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00240 Cpe06g00220 CCT
Cpe06g00220 Cpe07g00533 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00395 Cpe-Chr2:2196292 Cpe06g00220 Cpe-Chr6:1169376 0 dispersed
Cpe06g00220 Cpe-Chr6:1169376 Cpe17g01126 Cpe-Chr17:8546138 0 dispersed
Cpe02g00240 Cpe-Chr2:1233732 Cpe06g00220 Cpe-Chr6:1169376 0 wgd
Cpe06g00220 Cpe-Chr6:1169376 Cpe07g00533 Cpe-Chr7:3530141 3.39E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00220 - - csv:101204215 686.026