Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00242 ATGGATGGTTTTTTCCGAACAGTGGTGGCGAGTGTGCCTGTGGGAGTGGGTGCACTATTGTTCACGACGTTGTGCGTCGTGGGAGGGGGATTGGTTTATTTCTATGGACCGTACTGGGGAGTGAGAAGGGTGCCTGGTCCACCAGCTATTCCGCTGGTCGGACACCTTCCCTTGCTGGCTAAGTACGGCCCAGACGTTTTCTCTGTCCTCGCCTCCCAATATGGCCCTATCTTCAGGTTCCATATGGGTAGGCAGCCATTGATAATTATAGCAGACCCCGAGCTTTGTAAAGAAGTTGGTATCAAGAAATTCAAGGACATCCCAAATAGAAGTGTCCCTTCTCCAATATCAGCTTCCCCGCTTCATCAGAAAGGTCTTTTCTTCACAAGGGATGCAAGATGGTCGACAATGCGAAACACTATACTATCGGTCTATCAGCCCTCTCATCTAACGAGACTAATACCTACTATGCAATCAATCATTGAAACTGCCACTCAAAATCTCCATTCCTCTGTCGAGGAAGACATCCCTTTCTCCAATCTCTCCCTCAAATTGACCACCGATGTAATTGGAACAGCAGCCTTCGGTGTCAACTTTGGGCTCTCTAATCCTCAAGCAACCAAAACTTGCGGTACCAATGGCCATGACAGCAAAAATGATGAAGTTTCAGACTTCATCAATCAACATATCTACTCCACAACGCAGCTCAAGATGGATTTATCGGGTTCCTTCTCAATCATTTTGGGACTTCTTGTCCCTATACTCCAAGAACCATTTAGACAAATCCTGAAGAGAATACCATCCACCATGGACTGGAAAGTTGACCGGACAAATCAGAAGTTAAGTGGTCGGCTTAATGAGATTGTGGACAAGAGAATGAAGTGTAACGATCGAAGTTCAAAAGACTTCTTATCTCTCATTTTGAGAGCAAGAGAGTCAGAGACGGTATCAAGGAATGTCTTCTCTCCAGACTACATCAGCGCAGTCACGTACGAACACCTACTTGCTGGGTCAGCTACTACAGCATTCACGTTGTCTTCTATTGTATATTTAGTTGCTGGACATCCAGAAGTCGAGAAGAAGTTGCTAGAAGAGATTGACAACTATGGTCCATCAGATCAGATACCAACAGCTAATGATCTTCAACAAAAGTTTCCATATCTTGATCAGGTGATTAAAGAGGCTATGAGGTTCTACACTGTTTCCCCTCTAGTAGCTAGGGAGACATCTAAAGACGTGGAGATTGGTGGATATCTTCTTCCCAAGGGAACATGGGTTTGGTTAGCACTTGGAGTTCTTGCCAAGGATCCAAAGAATTTTCCAGAACCTGATAAATTTAAACCCGAGAGGTTTGATCCAGATGCAGAAGAGGAGAAACAAAGACACCCCTATGCCTTAATCCCATTCGGAATTGGTCCTCGAGCATGTATCGGTCAGAAGTTCGCCCTTCAGGAATTGAAGCTCACTTTGATTCATTTGTATAGGAAGTTTGCATTTAGGCATTCCCTCTCCATGGAACATCCTCTTGAACTTGAGTATGGTGTCATTCTCAACTTCAAGAATGGTGTCAAGCTCAGAGTGATTAACCGTAAATAG 1596 44.61 MDGFFRTVVASVPVGVGALLFTTLCVVGGGLVYFYGPYWGVRRVPGPPAIPLVGHLPLLAKYGPDVFSVLASQYGPIFRFHMGRQPLIIIADPELCKEVGIKKFKDIPNRSVPSPISASPLHQKGLFFTRDARWSTMRNTILSVYQPSHLTRLIPTMQSIIETATQNLHSSVEEDIPFSNLSLKLTTDVIGTAAFGVNFGLSNPQATKTCGTNGHDSKNDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPSTMDWKVDRTNQKLSGRLNEIVDKRMKCNDRSSKDFLSLILRARESETVSRNVFSPDYISAVTYEHLLAGSATTAFTLSSIVYLVAGHPEVEKKLLEEIDNYGPSDQIPTANDLQQKFPYLDQVIKEAMRFYTVSPLVARETSKDVEIGGYLLPKGTWVWLALGVLAKDPKNFPEPDKFKPERFDPDAEEEKQRHPYALIPFGIGPRACIGQKFALQELKLTLIHLYRKFAFRHSLSMEHPLELEYGVILNFKNGVKLRVINRK 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1293835 1297964 + Cp4.1LG06g02440.1 Cpe06g00242 471022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00242 531 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 PANTHER THROMBOXANE-A SYNTHASE 14 530 - -
Cpe06g00242 531 Gene3D Cytochrome P450 35 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Cpe06g00242 531 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 530 - -
Cpe06g00242 531 SUPERFAMILY Cytochrome P450 37 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00242 531 Pfam Cytochrome P450 45 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00242 Cpe-Chr6:1293835 Cpe04g00104 Cpe-Chr4:938648 3.66E-37 dispersed
Cpe06g00242 Cpe-Chr6:1293835 Cpe07g01083 Cpe-Chr7:9593696 5.90E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00242 K20771 - csv:101209772 1006.51