Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00243 ATGGGGGGTTCTGGGAAATGGAGGAAGGTCTTTACAGGACAGAGGAAGTCTGAGAAGGACGACAATGAGAAGTTGTGTAGTAAAACTAAGAAATGGAGGCTATGGAGGAGCCCTTCAGGGGATTTGAGCTCTGTATGGAAGGGTTACAAAGGGGCACATAAAGCAGCTTCTGAAGGCTCTGATTCTCCTCGTGCGCCTGATTCTTTTACTGCCGCCGTCGCCGCCGTCCTCCGTGCTCCGCCGAAGAATTTCAGGGTTGTCCGCCAAGAATGGGCTGCAATTCGGATCCAAACTGCATTTCGTGGTTTCTTGTCTAGGAGGGCTCTTAGAGCCTTGAAGGGAGTGGTGAGGCTTCAAGCTCTGGTGAGGGGTCGTTTGGTGAGGAAGCAGGCAGCTATTACACTGAGGTGCATGCAGGCTCTGGTTAGAGTCCAAGCTCGTGTCCGAGCGCGTCATGTGAGGATGTCGGTTGAGGGGCAGGCTGTGCAGCAATTGCTTAATGAACATCGCAGCAAGGCTGATCTCCTAAAGCAAGCTGAGGAAGGTTGGTGTGATAGCAAAGGGACAATGGAAGATATCAAAGCTAAGTTACAAATGAAGCAATATGGAGCATTTAAGAGGGAAAGAGCAATTGCTTACTCTCTTGTTCAGAAGCAATTGAAGGCAACACCAAGCTCAACTTCGCAAATAAATGCATCGATTTACGCTCTTAAGAATTCCGAGTTCGACAAGAACAATTGGGGATGGAGTTGGTTGGAGAGATGGATGGCAGCTAAGCCATGGGAGTCAATGTTGAAAGAACAATCTCGCACTGATTCCATTGAGGTCACTCCACCACCTTCAAAGAAATGTATAGAGTCTATTGTACCTAAACATTCCATAGTTTCTGAACCAGGTTTGGTGAAGATTCGGAGAAACAATGTATCCACTAGGATATCTGCTAAACCTCCCTCAAGTGGGCAAGCTCGTTCTTGTTCCAGCCCAAGTTCTGATTTCCGGTATGATGAGAGCTCTGTTTCATCTTCGATCTGCACGTCGACAACTCCTGCGTCGGGGAATGTTTTCTCATCCATTGAAAGACCTGAGAATAGCAGTTACAGTAGGCCAAGTTACATGAACCCTACAGAGTCGACGAAGGTGAAGCAGAAAACAAACAGTCACTTATCGCATCGAGTTCAAAGGCAGTCCATGGATGAGTATCAATTCCTTCAGAAGTCAGCAGGTTTCTCTAATGGGGATTCTAAGAGCAGTGCTGGCTCTGATTCATCAGTCAACCCCTTTAAGCCATTCATGCTGTCCACACGATTGGATAAGAATGGAACAAAGCTAAGATCATGA 1338 47.16 MGGSGKWRKVFTGQRKSEKDDNEKLCSKTKKWRLWRSPSGDLSSVWKGYKGAHKAASEGSDSPRAPDSFTAAVAAVLRAPPKNFRVVRQEWAAIRIQTAFRGFLSRRALRALKGVVRLQALVRGRLVRKQAAITLRCMQALVRVQARVRARHVRMSVEGQAVQQLLNEHRSKADLLKQAEEGWCDSKGTMEDIKAKLQMKQYGAFKRERAIAYSLVQKQLKATPSSTSQINASIYALKNSEFDKNNWGWSWLERWMAAKPWESMLKEQSRTDSIEVTPPPSKKCIESIVPKHSIVSEPGLVKIRRNNVSTRISAKPPSSGQARSCSSPSSDFRYDESSVSSSICTSTTPASGNVFSSIERPENSSYSRPSYMNPTESTKVKQKTNSHLSHRVQRQSMDEYQFLQKSAGFSNGDSKSSAGSDSSVNPFKPFMLSTRLDKNGTKLRS 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1295976 1298800 - Cp4.1LG06g02520.1 Cpe06g00243 471023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00243 445 MobiDBLite consensus disorder prediction 389 429 - -
Cpe06g00243 445 Pfam IQ calmodulin-binding motif 91 110 IPR000048 GO:0005515
Cpe06g00243 445 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
Cpe06g00243 445 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Cpe06g00243 445 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 440 - -
Cpe06g00243 445 MobiDBLite consensus disorder prediction 309 382 - -
Cpe06g00243 445 PANTHER IQ-DOMAIN 5-RELATED 1 440 - -
Cpe06g00243 445 MobiDBLite consensus disorder prediction 1 23 - -
Cpe06g00243 445 MobiDBLite consensus disorder prediction 309 445 - -
Cpe06g00243 445 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Cpe06g00243 445 SMART iq_5 111 132 IPR000048 GO:0005515
Cpe06g00243 445 SMART iq_5 88 110 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00087 Cpe-Chr2:438656 Cpe06g00243 Cpe-Chr6:1295976 2.82E-22 dispersed
Cpe06g00243 Cpe-Chr6:1295976 Cpe13g00819 Cpe-Chr13:7295985 1.25E-44 dispersed
Cpe09g01069 Cpe-Chr9:9301579 Cpe06g00243 Cpe-Chr6:1295976 8.13E-22 dispersed
Cpe14g01046 Cpe-Chr14:8772549 Cpe06g00243 Cpe-Chr6:1295976 7.50E-11 transposed
Cpe18g00224 Cpe-Chr18:3887819 Cpe06g00243 Cpe-Chr6:1295976 4.26E-66 transposed
Cpe12g00611 Cpe-Chr12:6065899 Cpe06g00243 Cpe-Chr6:1295976 2.18E-80 wgd
Cpe02g00266 Cpe-Chr2:1377504 Cpe06g00243 Cpe-Chr6:1295976 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00243 - - csv:101210019 753.821