Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe06g00253 | ATGAGCCTAGATGCCGCTGAGGATGAATCCACCTCTGAAATTCATATTCCAGCAGAGATTGATTGGGATATGTTAGACAAATCCAAATTCTTTTTTCTGGGTGCTGCTTTATTTTCAGGTGTATCAACCGCCCTTTATCCTATTGTTGTTTTGAAAACTCGACTTCAGGTTTCTTCTACCAAGTTATCCTGCTTTAAAATGTCATATTCTATCATGCGCCATGAAGGCTTAAGAGGATTTTACAGAGGGTTTGGAACCTCTTTAATGGGAACTATCCCAGCTCGAGCCTTTTACATGGCAGCTCTTGAAGTTACCAAGAGTGGTGTTGGAAGTGCAACTATTAGGCTAGGTCTTTCAGACACCACAGCCATGGCTATAGCTAATGCAGCTGCAGGGTTGAGCTCTGCCATGGCTGCTCAATTGGTCTGGACTCCAGTAGATGTTGTAAGCCAACGACTAATGGTTCAGGGCAGCTGTATCAATGCTAAGAACAGTGTTTCTAATCTTAATTCTTGCGTTTATAAAAACGGTATCGACGCGTTTAGAAAGATCATTTATGCTGATGGCTTGCGAGGATTATATAGGGGATTTGGGATTTCAATATTGACATATGCTCCATCAAATGCAGTTTGGTGGGCTTCTTACTCTGTAGCTCATAGATTCATTTGGAGTGGTCTAAGCTACTACACAAGTAAGAAGGATGAGAGTTGTATAAGTGGCTATGGTTTTAAAGCAGATTCTAAGGCAACAGTGGCAGTTCAAGGGTTGAGTGCAACCTTTGCCAGTGGGGTTTGTGCTATGATAACAATGCCATTGGATACCATCAAGACTAGATTGCAAGTTTTGGATGGAGAAGAAAATGGCCAGAGACGCCCTCTAACGGCGTTGCAGACCGTAAGGAACTTGGTGAAGGAAGGCGGTCTGAATGCTTGTTATAGAGGGCTTGGACCGAGGTGGGCTTCCATGGCTATGTCTGCAACCACCATGATCACAACCTATGAGTTTCTCAAACGGCTATCTGCTAAGAACCAAGATCGTTTGAGCTGA | 1047 | 43.46 | MSLDAAEDESTSEIHIPAEIDWDMLDKSKFFFLGAALFSGVSTALYPIVVLKTRLQVSSTKLSCFKMSYSIMRHEGLRGFYRGFGTSLMGTIPARAFYMAALEVTKSGVGSATIRLGLSDTTAMAIANAAAGLSSAMAAQLVWTPVDVVSQRLMVQGSCINAKNSVSNLNSCVYKNGIDAFRKIIYADGLRGLYRGFGISILTYAPSNAVWWASYSVAHRFIWSGLSYYTSKKDESCISGYGFKADSKATVAVQGLSATFASGVCAMITMPLDTIKTRLQVLDGEENGQRRPLTALQTVRNLVKEGGLNACYRGLGPRWASMAMSATTMITTYEFLKRLSAKNQDRLS | 348 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1347418 | 1348464 | + | Cp4.1LG06g02420.1 | Cpe06g00253 | 471033 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe06g00253 | 348 | SUPERFAMILY | Mitochondrial carrier | 23 | 336 | IPR023395 | - | |
Cpe06g00253 | 348 | Gene3D | Mitochondrial carrier domain | 28 | 347 | IPR023395 | - | |
Cpe06g00253 | 348 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 123 | 221 | IPR018108 | - | |
Cpe06g00253 | 348 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN | 1 | 346 | - | - | |
Cpe06g00253 | 348 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 1 | 346 | - | - | |
Cpe06g00253 | 348 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 26 | 108 | IPR018108 | - | |
Cpe06g00253 | 348 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 249 | 339 | IPR018108 | - | |
Cpe06g00253 | 348 | Pfam | Mitochondrial carrier protein | 250 | 343 | IPR018108 | - | |
Cpe06g00253 | 348 | Pfam | Mitochondrial carrier protein | 36 | 107 | IPR018108 | - | |
Cpe06g00253 | 348 | Pfam | Mitochondrial carrier protein | 126 | 222 | IPR018108 | - | |
Cpe06g00253 | 348 | PRINTS | Mitochondrial carrier protein signature | 40 | 58 | IPR002067 | GO:0055085 | |
Cpe06g00253 | 348 | PRINTS | Mitochondrial carrier protein signature | 81 | 99 | IPR002067 | GO:0055085 | |
Cpe06g00253 | 348 | PRINTS | Mitochondrial carrier protein signature | 132 | 154 | IPR002067 | GO:0055085 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g00281 | Cpe06g00253 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g01311 | Cpe-Chr3:10613913 | Cpe06g00253 | Cpe-Chr6:1347418 | 1.75E-73 | dispersed | |
Cpe06g00253 | Cpe-Chr6:1347418 | Cpe17g00470 | Cpe-Chr17:3502403 | 8.28E-157 | dispersed | |
Cpe12g00598 | Cpe-Chr12:5973612 | Cpe06g00253 | Cpe-Chr6:1347418 | 3.57E-153 | wgd | |
Cpe02g00281 | Cpe-Chr2:1456039 | Cpe06g00253 | Cpe-Chr6:1347418 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe06g00253 | K15121 | - | csv:101213436 | 610.142 |