Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00276 ATGGCGTTCCGGTTTGATTTCGGCGGTTCCGCGGGCATTCGAGGAACGCCTTGTTCCTTCCACTTCTGTAACCATAGCTACGAGAACTTGTTTGTTAGGATTGGAGCTGGCTATGTTCAGAGCCTAGACAACATGGGCTATCTGGATTCAGTCTTGTCTTGCTCGAGCCAGATTCATGCTGCTGAGGAGGCAGCTGTTAGCGGCGGGGGACTTAGTCAGAATGGAAAGTTCAGCTATGGATATGCTAGCTCTCCAGGAAAGAGATCTTCGATGGAAGATTTTTACGAGACACGAATCGACGGTGTGGAAGGAGAAATAGTTGGTCTATTTGGTGTTTTCGACGGTCATGGCGGAGCACGAGCGGCGGAGTATGTTAAGCACAATCTTTTTAGTAATTTGATCAGGCATCCAAAGTTCATTTCAGATACCAAATCTGCTATAGCCGATGCATACAACCACACAGACACGGAATTTCTGAAGTTGGAAAATAATCAAAACAAAGATGCTGGATCAACTGCTTCCACTGCCATCCTAGTTGGTGACCGTTTACTTGTTGCAAATGTTGGTGACTCTAGAGCTGTTATTTCCCGGGATGGCACTGCCATTGCTGTCTCTCGAGATCATAAGCCTGACCAAACTGATGAGCGACGACGAATCGAGGATGCAGGAGGATTTGTGATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTCTCACGTGCATTTGGGGATAGGTTGTTAAAGCAATATGTTGTTGCTGACCCCGAAATTCAGGAGGAAAAGATTGATAGCTCACTCGAGATTCTTATACTTGCAAGCGATGGACTGTGGGATGTCGTCTCTAACGAGGAAGCTGTTGCTATGACTAAACCAATTCAGGACCCAGAAGAGGCAGCAAAGAGGTTGTTACAAGAAGCATATCAGAGAGGCAGTGCCGATAACATTACTTGCGTCGTCGTCCGTTTCTTGGCGAATCAAGGAAGTTCCTCAGGGTAA 1002 47.01 MAFRFDFGGSAGIRGTPCSFHFCNHSYENLFVRIGAGYVQSLDNMGYLDSVLSCSSQIHAAEEAAVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYNHTDTEFLKLENNQNKDAGSTASTAILVGDRLLVANVGDSRAVISRDGTAIAVSRDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEILILASDGLWDVVSNEEAVAMTKPIQDPEEAAKRLLQEAYQRGSADNITCVVVRFLANQGSSSG 333
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 1521860 1525527 - Cp4.1LG06g02880.1 Cpe06g00276 471056
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00276 333 ProSitePatterns PPM-type phosphatase domain signature. 109 117 IPR000222 GO:0043169
Cpe06g00276 333 SUPERFAMILY PP2C-like 72 324 IPR036457 -
Cpe06g00276 333 CDD PP2Cc 77 324 IPR001932 -
Cpe06g00276 333 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 48 331 - -
Cpe06g00276 333 Pfam Protein phosphatase 2C 107 317 IPR001932 -
Cpe06g00276 333 ProSiteProfiles PPM-type phosphatase domain profile. 78 324 IPR001932 -
Cpe06g00276 333 SMART PP2C_4 68 322 IPR001932 -
Cpe06g00276 333 SMART PP2C_SIG_2 89 324 IPR001932 -
Cpe06g00276 333 PANTHER ALPHABET, ISOFORM E-RELATED 48 331 - -
Cpe06g00276 333 Gene3D - 69 329 IPR036457 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe02g00310 Cpe06g00276 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00276 Cpe-Chr6:1521860 Cpe09g00038 Cpe-Chr9:231284 5.38E-120 dispersed
Cpe08g01339 Cpe-Chr8:9653010 Cpe06g00276 Cpe-Chr6:1521860 2.47E-44 dispersed
Cpe02g00310 Cpe-Chr2:1640017 Cpe06g00276 Cpe-Chr6:1521860 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00276 K17506 - csv:101216117 550.051