Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00280 ATGCTTAGCGAAGACCAAATCCTTTTATTCCCAGTTAGCTTCTCAGATACAACGACAGATTTGTTCATGGCGAAAACGGCGTCGTGTAGCGATATATGCAAGTCGTTTTTGCTTCTTCTGGTTTTGTCTGTTCCGGCATCGACGGTGGCCTTGTCGTTCGGGTTTTACGCTGCCACGTGTCCTGCGGCGGAGTTTATGGTCCGGAATATCGTTAGATCGGCTTCCTCCGTTGACCCCTCCGTTCCCGGCAAGCTCCTCCGACTTCTCTTCCATGACTGTTTTGTTGAGGGCTGTGACGCATCTGTGTTGCTGCAAGGAAATGGAACGGAAAGAACTGACCCTGGAAACAAGTCTCTTGGAGGCTTTGAAGTTATTGATTCAGCTAAGAGAAATCTTGAATTTTTCTGTCCCCAAACTGTCTCCTGTGCCGACATTGTCGTTTTGGCCGCCAGAGATGCCGTTGAATTCACAGGCGGGCCCTTCGTCCAAGTCCCGACCGGCCGGAGAGACGGAAAAATATCGGCGGCGTCAAACGTCCGACCAAACATTGTCGACACAAGCTTTTCAGTCGACCAAATGATGTCTCTCTTCTCATCAAAAGGTCTGTCGGCGGACGATCTTGTCGTCCTTTCTGGGGCCCACACCATCGGATCGGCCCACTGCAGCGCCTTCAGTGACCGCTTCAGAAGAGATTCAAACGGCCGAATGAGCCTCGTCGACGCCTCTCTGGACGGCTCATATGCCAACGATCTTATGCGGCGGTGCTCCGCCGGCGCCGCCTCCGCCGTCACCGTCGAAAACGATCCGGAGACGGCGGCTGTCTTCGACAATCAGTACTACAGAAACATTCTGTCGCACAAAGGCCTGTTTCAGTCGGATTCTGTTCTGATTAGCGACGGCCGGACCAGGGCCCGGGTGGAGAGCTTTGCAGAGGATCAGATTGGGTTCTTTGAAAGCTGGGCTCAGTCGTTCTTGAAACTCAGTAGTATTGGAGTTAAAAGTGGGGACGAAGGGGAAATTAGAATGTCTTGTTCTTCTAATAATGTTTGA 1050 52.0 MLSEDQILLFPVSFSDTTTDLFMAKTASCSDICKSFLLLLVLSVPASTVALSFGFYAATCPAAEFMVRNIVRSASSVDPSVPGKLLRLLFHDCFVEGCDASVLLQGNGTERTDPGNKSLGGFEVIDSAKRNLEFFCPQTVSCADIVVLAARDAVEFTGGPFVQVPTGRRDGKISAASNVRPNIVDTSFSVDQMMSLFSSKGLSADDLVVLSGAHTIGSAHCSAFSDRFRRDSNGRMSLVDASLDGSYANDLMRRCSAGAASAVTVENDPETAAVFDNQYYRNILSHKGLFQSDSVLISDGRTRARVESFAEDQIGFFESWAQSFLKLSSIGVKSGDEGEIRMSCSSNNV 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1540883 1542926 - Cp4.1LG06g02840.1 Cpe06g00280 471060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00280 349 PANTHER PEROXIDASE 25-RELATED 41 347 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 CDD secretory_peroxidase 51 345 IPR033905 GO:0004601|GO:0042744
Cpe06g00280 349 PANTHER PEROXIDASE 18-RELATED 41 347 - -
Cpe06g00280 349 Gene3D - 54 348 - -
Cpe06g00280 349 Pfam Peroxidase 67 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 ProSiteProfiles Plant heme peroxidase family profile. 50 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 206 216 IPR019793 -
Cpe06g00280 349 PRINTS Plant peroxidase signature 158 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Plant peroxidase signature 266 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Plant peroxidase signature 60 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Plant peroxidase signature 84 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Plant peroxidase signature 205 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Plant peroxidase signature 322 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Plant peroxidase signature 282 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Plant peroxidase signature 139 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Haem peroxidase superfamily signature 206 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Haem peroxidase superfamily signature 140 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Haem peroxidase superfamily signature 82 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Haem peroxidase superfamily signature 158 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 PRINTS Haem peroxidase superfamily signature 268 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe06g00280 349 Gene3D Peroxidase, domain 2 184 327 - -
Cpe06g00280 349 SUPERFAMILY Heme-dependent peroxidases 51 347 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00280 Cpe-Chr6:1540883 Cpe19g00876 Cpe-Chr19:6426026 2.28E-80 dispersed
Cpe02g00312 Cpe-Chr2:1650924 Cpe06g00280 Cpe-Chr6:1540883 8.49E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00280 K00430 K18328 csv:101211842 555.444