Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe06g00351 | ATGGCTGGGAGATCGATGTGCGGGAGAGAGGATCAGCGAGAGCTTGAGCACTTATCGAGAGACGACGGCAGCCAATACAGCCTCACGGGCGGAATCCTGCCGCCGCTTGGCGTGAATGGGCGAAATAATCGAAGAAGCAAACTCGGTCCTCATATAATCTCGCCGTTCGATTACAATTACAGATTTTGGGAGACGTTTCTGATATTTCTGGTACTCTACACAGCCTGGGCATGTCCGTTTGAGTTTGGGTTTCTCCCTTCGCCCAGCGGAGTTCTGGCAATAATTGACAATGTTGTCAATGGACTTTTCGCCATTGATATAGTTCTGACATTCTTCGTGGCGTATTTGGACAAAACGACTTACCTGCTGGTGGATGACCGGAAGCTGATTGCTCTACGGTATGCCAAAACCTGGTTGGTCCTCGACGTTGTGTCCAATATTCCGTCGGAGATGGCTCGCAATATTCTCCCTCCTTCCCTTCAGGTTTATGGCTACTTCAACATGCTTCGTCTATGGCGTCTTCGAAGAGTCAGCTCCATGTTCGCCAGGTTGGAAAAAGACAGGAACTACAACTATTTCTGGGTTCGATCTGCAAAGCTTATGTTTGTGTGTCTGTTCACAGTTCATTTTGCTGGCTGTTGCTTCTATCTAATTGATTCAAACTATAAGGACCCCAAAAGAACATGGTCGACCTTATACATAGAAGACTTCCATAATAAAAGTTTGTGGGTGCGTTATGTGACTTCCATTTACTGGTCAATTGTCACAATTACCACCACTGGCTATGGCGATTTGCATCCAATCAATGATCAAGAGATGTCATTTGTCATTTGTTATCTGTTCTTCATTCTGGGGTTGCAATCTTACCTGATTGGAAATATGACAAACTTGGTCGTCCATGGCACGAGTCGAACCAGGCAATTTAGGGACACCGTTCAAGCTGCCTCAAATTTCGCCCAAAGAAATCAACTGCCTGGTCGGCTGCAAGAACAGATGCTAGCTCATCTGTGTTTGAAATTCAGGATTGATTCAGAGGGTTTACAACAGCAAGAGACAATTGATTCTCTTCCAAAAGCCATTAGATCCGGCATCGCACACCATCTCTTCTATTCACTCGTTGATAGTGCTTATTTGTTCAATGGGGTGTCAACCGACTTGATCTTTCAACTGGTGACAGAAATGAAGGCTGAGTACTTTCCTCCCAAAGAAGACATCATCTTGCAGAATGAAGCACCAACAGATTTCTATATAGTTGTCACTGGCACTGCGGATCTTATTGTACAAAGAAATGGAATGGAAGAGATCGTCGGAGAAGCAAAGACAGGAGATGTCATTGGTGAGATTGGCGTGCTTTGTTATCAACCACAACTGTTTACAGTTCGAACCAGCCGTTTGAGTCAACTGTTGCGATTGAATCGCTCTTCGTTTTTCAACTTAGTACAAGCTAGCGTTGGGGATGGGACAATAATAATGAACAATCTCCTTAAGCACCTGAAGGAGGTAAAAGACCCAATGATGGAGGAAATTCTGCAAGAAACAGAACAGTCCTTGATTCGTGCTGGAATGGAAATGCCTCTCAATTTATACTTTGCGGCAAGCAGTGGCGATGACTTATTGTTGCATCAGTTGCTAAAGCGTGGTTCAAACCCAAATGAAGTAGATGAGGGTAACGGGAAGACAGCACTTCATATTGCAGCTGCTAAAGGAAACGAACACTGCGTAGTTCTACTCCTAGAGTATGGGGCAGATCCGAATCGAAGAGACTTTGAAGGAAGCCTACCCTTGTGGCAAGCAATACAAGGAAATCATGAGCCTATAGTCAAGCTTCTAATAGACAACGGTGCCGATATTTCTTCAGGAGACGTCGCCCAGTTTGCATGCACCGCTGTGGAGCAAAACAACATAGATATGCTCAAATCCATCATCGAATGTGGTGGAGATGTAACTCTGCCTAGAAGCAACGGGACTACAGCTCTTCACACGGCAGTATGTGAAGGAAACAGTGAAATGGTTAAGTTCCTTTTAGAGCATGGGGCTGACATTGATAAGGCAGATGTTCATGGATGGACTCCACGAGCGTTAGCAGATCATCAAGGCCATGAAGAGATAAAAGAACTATTCTCTCTTAAGCAAGCTGTGAATAAATCATCTGTTGTCCATATTCCACAAAATCCCGAATCAAATTATCTACGGAAGTTCCAGAGCGAGTCGATCATACCGCGGTTTTCCCATGACTCCTGCATGACTCCTGTTCGAGAATCAAATTGTTCTGATATGCCTCCTAGAAGGAGAAGGAGCAATAATTATCGAAATTCGCTAGTCGGGTTCATGGAAAATACCAATAAGGGTGAAAGGGACGTTCTACAATCCGCATTGCTCGGTTTTAGCAATAGCCGAAGCGTGAGATCGGCTTACCAGGCAAGAGTTGTTCTCAGTTGCCCTGAGAAAGGACAAGTTATTGGAAAGCTTGTGCTTTTACCCAAAACCATCCAAGAACTAGTTGAAACTGGTTCCAAAAAATTTGGGGTTTCTGCAACAATGATTTTAACTCATGAAGGAGCTGAAGTTGAGGATATAGACCTTGTCAGAGACGGTGATCACCTCATTCTTGTCGGTGATGCCAGTGCCGCCGTCCCGAGTGGCCAAGTACGGTAG | 2655 | 44.82 | MAGRSMCGREDQRELEHLSRDDGSQYSLTGGILPPLGVNGRNNRRSKLGPHIISPFDYNYRFWETFLIFLVLYTAWACPFEFGFLPSPSGVLAIIDNVVNGLFAIDIVLTFFVAYLDKTTYLLVDDRKLIALRYAKTWLVLDVVSNIPSEMARNILPPSLQVYGYFNMLRLWRLRRVSSMFARLEKDRNYNYFWVRSAKLMFVCLFTVHFAGCCFYLIDSNYKDPKRTWSTLYIEDFHNKSLWVRYVTSIYWSIVTITTTGYGDLHPINDQEMSFVICYLFFILGLQSYLIGNMTNLVVHGTSRTRQFRDTVQAASNFAQRNQLPGRLQEQMLAHLCLKFRIDSEGLQQQETIDSLPKAIRSGIAHHLFYSLVDSAYLFNGVSTDLIFQLVTEMKAEYFPPKEDIILQNEAPTDFYIVVTGTADLIVQRNGMEEIVGEAKTGDVIGEIGVLCYQPQLFTVRTSRLSQLLRLNRSSFFNLVQASVGDGTIIMNNLLKHLKEVKDPMMEEILQETEQSLIRAGMEMPLNLYFAASSGDDLLLHQLLKRGSNPNEVDEGNGKTALHIAAAKGNEHCVVLLLEYGADPNRRDFEGSLPLWQAIQGNHEPIVKLLIDNGADISSGDVAQFACTAVEQNNIDMLKSIIECGGDVTLPRSNGTTALHTAVCEGNSEMVKFLLEHGADIDKADVHGWTPRALADHQGHEEIKELFSLKQAVNKSSVVHIPQNPESNYLRKFQSESIIPRFSHDSCMTPVRESNCSDMPPRRRRSNNYRNSLVGFMENTNKGERDVLQSALLGFSNSRSVRSAYQARVVLSCPEKGQVIGKLVLLPKTIQELVETGSKKFGVSATMILTHEGAEVEDIDLVRDGDHLILVGDASAAVPSGQVR | 884 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1959125 | 1964546 | + | Cp4.1LG06g03470.1 | Cpe06g00351 | 471131 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe06g00351 | 884 | Gene3D | - | 525 | 709 | IPR036770 | - | |
Cpe06g00351 | 884 | ProSiteProfiles | Ankyrin repeat region circular profile. | 590 | 621 | - | - | |
Cpe06g00351 | 884 | ProSiteProfiles | Ankyrin repeat profile. | 590 | 622 | IPR002110 | GO:0005515 | |
Cpe06g00351 | 884 | Pfam | Ankyrin repeats (3 copies) | 629 | 707 | IPR002110 | GO:0005515 | |
Cpe06g00351 | 884 | Pfam | Ankyrin repeats (3 copies) | 528 | 619 | IPR002110 | GO:0005515 | |
Cpe06g00351 | 884 | Pfam | KHA, dimerisation domain of potassium ion channel | 808 | 870 | IPR021789 | - | |
Cpe06g00351 | 884 | CDD | CAP_ED | 378 | 481 | IPR000595 | - | |
Cpe06g00351 | 884 | Gene3D | - | 61 | 299 | - | - | |
Cpe06g00351 | 884 | ProSiteProfiles | Ankyrin repeat region circular profile. | 557 | 588 | - | - | |
Cpe06g00351 | 884 | PANTHER | POTASSIUM CHANNEL AKT1 | 5 | 875 | IPR045319 | GO:0005249|GO:0006813 | |
Cpe06g00351 | 884 | SUPERFAMILY | Voltage-gated potassium channels | 55 | 299 | - | - | |
Cpe06g00351 | 884 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 378 | 480 | IPR000595 | - | |
Cpe06g00351 | 884 | PRINTS | EAG/ELK/ERG potassium channel family signature | 96 | 106 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe06g00351 | 884 | PRINTS | EAG/ELK/ERG potassium channel family signature | 73 | 80 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe06g00351 | 884 | PRINTS | EAG/ELK/ERG potassium channel family signature | 107 | 116 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe06g00351 | 884 | PRINTS | EAG/ELK/ERG potassium channel family signature | 290 | 299 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe06g00351 | 884 | PRINTS | EAG/ELK/ERG potassium channel family signature | 246 | 263 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe06g00351 | 884 | Gene3D | Jelly Rolls | 346 | 516 | IPR014710 | - | |
Cpe06g00351 | 884 | ProSiteProfiles | Ankyrin repeat region circular profile. | 654 | 685 | - | - | |
Cpe06g00351 | 884 | ProSiteProfiles | Ankyrin repeat profile. | 557 | 589 | IPR002110 | GO:0005515 | |
Cpe06g00351 | 884 | SUPERFAMILY | Ankyrin repeat | 528 | 707 | IPR036770 | - | |
Cpe06g00351 | 884 | Pfam | Cyclic nucleotide-binding domain | 398 | 482 | IPR000595 | - | |
Cpe06g00351 | 884 | SMART | ANK_2a | 523 | 552 | IPR002110 | GO:0005515 | |
Cpe06g00351 | 884 | SMART | ANK_2a | 590 | 619 | IPR002110 | GO:0005515 | |
Cpe06g00351 | 884 | SMART | ANK_2a | 621 | 650 | IPR002110 | GO:0005515 | |
Cpe06g00351 | 884 | SMART | ANK_2a | 557 | 586 | IPR002110 | GO:0005515 | |
Cpe06g00351 | 884 | SMART | ANK_2a | 654 | 683 | IPR002110 | GO:0005515 | |
Cpe06g00351 | 884 | PRINTS | Ankyrin repeat signature | 558 | 573 | IPR002110 | GO:0005515 | |
Cpe06g00351 | 884 | PRINTS | Ankyrin repeat signature | 670 | 684 | IPR002110 | GO:0005515 | |
Cpe06g00351 | 884 | ProSiteProfiles | KHA domain profile. | 808 | 884 | IPR021789 | - | |
Cpe06g00351 | 884 | PANTHER | POTASSIUM CHANNEL AKT1-LIKE ISOFORM X1 | 5 | 875 | - | - | |
Cpe06g00351 | 884 | ProSiteProfiles | Ankyrin repeat profile. | 654 | 686 | IPR002110 | GO:0005515 | |
Cpe06g00351 | 884 | SMART | cnmp_10 | 378 | 495 | IPR000595 | - | |
Cpe06g00351 | 884 | Pfam | Ion transport protein | 61 | 305 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Cpe06g00351 | 884 | SUPERFAMILY | cAMP-binding domain-like | 303 | 498 | IPR018490 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe06g00351 | Cpe-Chr6:1959125 | Cpe18g00465 | Cpe-Chr18:5605324 | 0 | dispersed | |
Cpe01g02572 | Cpe-Chr1:20928916 | Cpe06g00351 | Cpe-Chr6:1959125 | 1.40E-10 | transposed | |
Cpe04g01174 | Cpe-Chr4:10007142 | Cpe06g00351 | Cpe-Chr6:1959125 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe06g00351 | K21867 | - | csv:101217334 | 1365.9 |