Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe06g00368 | ATGACGACACCAATGTCCGAAACAAGGTCGCCGTTGCCTTTGCTGTTCCGGCGGCACTCAAGTGGCGAAATAAAGAACTTGACGTCGGTTTCCAGCAGCCTTTTGCCGGCGTTTGGAACTGTTGTGACCGATGGATACTCAAACCTGAACAAGTTCATTATAGTTCCGTATGATAGAAGATATCGGTGGTGGCAAACTTTCCTGGTAGTGCTAGTGGTGTACTCAGCGTGGGTATCTCCCTTTGAACTTGCCTTCAAGAAAGTGGCAACTGGGTCTCTTTTACCCGTTGATTTGGTGGTGGATGCATTCTTTGCCCTTGATATTGTCTTGACCTTCTTCGTGGCTTATTTGGATAAATCCACTTATCTCCTCGTTGATGATCACAAGAAGATTGCTGTACGTTACCTTACAAGCCTGTGGTTCCCCATGGACGTAGCCTCCACTCTTCCATTTCAGGTAATATACAGAATTTTCACTGGAGAGATGAACCGCAATGAGGTCTTCGGCTTCCTCAACTTACTTCGGTTCTGGCGACTAAGGCGTGTTAGTGAACTTTTCTCAAGGCTGGAGAAAGACATACGCTTCAGTTACTTTTTAACAAGACTCATCAAACTAATTTGTGTTACACTGTTGGCAGTTCATTCAGCTGGTTGTTTCTACTACTGGCTGGCAATTCATCATAAAGATGCAGAAAATACATGGATTGGAATTGAAGTAGAAGATTTTAAAAGCAGAAGTATCTGGCTTGGCTACACCTATTCAATATATTGGTCAATTGTCACACTTGCCACCGTTGGTTATGGGGACTTGCATGCAGTTAATCTAGGGGAGAAGATTTTTAGCATCTGCTACATGTTATTCAACATCGGCCTCACGTCTTACTTGATAGGAAACATGACAAATCTTATCGTTCACAGTGCTATCCGAACATTTATCATGAGGGATTCCATAAATGAGATATTGCGTTATGGAAGCAAGAATAGACTGCCAGAAAGCTTGAAAGATCAAATGTTGGCGCACATGCAGCTCAAGTTCAAGACAGCAGAGTTGAAGCAAGAAGAGGTGTTGGAGGATTTACCTAAAGCAATCAGAACCAGTATTGCCCAGCACCTTTTCCGTCGTACAGTTGAGAATGCATACTTATTCAAGGATCTATCTAACGACTTAATCGCCCAATTGGTGTCTGAGATGAAAGCCGAGTACTTTCCACCTAAAGTTGACATTATAATACAAAATGAGATACCAACAGATTTCTACATTTTGGTGTCTGGATCAGTGGATGTGATCGTGTACAAGACTGGAACTGAACAGACAGTACAAGCAGTGCACATCTTGAATTTCAATAAACCAAGAACTGAAATTTTGTCAAAGCTGGAATCTCCACAGATGGCAGGGGAAATTGCTGTGATGTTGAATATCCCACAGCCATTTACAGTGAGAACTAGAAGACTCTCCCAAGTCATCAGGATAAGTCATCATCATTTTAAGCAAATGTTACAACCAAACAACGAAGATGGAAAAACCCTTTTCATCAACTTCACTGAGCACTTGAAGGGGATGAAAAAGGAGGAGCAAAACGAAATACCCTACTTTTCAGAGTTGCTGGAAGACCTAAATTCAGAGTTCACAGAACCGAATGAGACACAAAATCAGAGACTACCAGATTATCATGGAGATCAAAAAATGGAAGGATCGCCAGAAGCATCTACACCATTGCCACATACAGATCGCATCAGGGTGATAATTCACGAGCACCATCCAGATGAAAGTACAAAAGATGGCAAGGGTATGGGAAAACTGGTATTTCTGCCCAAGTCGATTGAAGAACTTTTCGGATTGGCAGGTATTATGATTAGATTTGTGTGA | 1866 | 42.07 | MTTPMSETRSPLPLLFRRHSSGEIKNLTSVSSSLLPAFGTVVTDGYSNLNKFIIVPYDRRYRWWQTFLVVLVVYSAWVSPFELAFKKVATGSLLPVDLVVDAFFALDIVLTFFVAYLDKSTYLLVDDHKKIAVRYLTSLWFPMDVASTLPFQVIYRIFTGEMNRNEVFGFLNLLRFWRLRRVSELFSRLEKDIRFSYFLTRLIKLICVTLLAVHSAGCFYYWLAIHHKDAENTWIGIEVEDFKSRSIWLGYTYSIYWSIVTLATVGYGDLHAVNLGEKIFSICYMLFNIGLTSYLIGNMTNLIVHSAIRTFIMRDSINEILRYGSKNRLPESLKDQMLAHMQLKFKTAELKQEEVLEDLPKAIRTSIAQHLFRRTVENAYLFKDLSNDLIAQLVSEMKAEYFPPKVDIIIQNEIPTDFYILVSGSVDVIVYKTGTEQTVQAVHILNFNKPRTEILSKLESPQMAGEIAVMLNIPQPFTVRTRRLSQVIRISHHHFKQMLQPNNEDGKTLFINFTEHLKGMKKEEQNEIPYFSELLEDLNSEFTEPNETQNQRLPDYHGDQKMEGSPEASTPLPHTDRIRVIIHEHHPDESTKDGKGMGKLVFLPKSIEELFGLAGIMIRFV | 621 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2067318 | 2073968 | - | Cp4.1LG06g03700.1 | Cpe06g00368 | 471148 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe06g00368 | 621 | Pfam | Ion transport protein | 61 | 304 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Cpe06g00368 | 621 | Gene3D | Jelly Rolls | 346 | 527 | IPR014710 | - | |
Cpe06g00368 | 621 | SMART | cnmp_10 | 381 | 514 | IPR000595 | - | |
Cpe06g00368 | 621 | MobiDBLite | consensus disorder prediction | 545 | 573 | - | - | |
Cpe06g00368 | 621 | SUPERFAMILY | Voltage-gated potassium channels | 56 | 304 | - | - | |
Cpe06g00368 | 621 | SUPERFAMILY | cAMP-binding domain-like | 310 | 516 | IPR018490 | - | |
Cpe06g00368 | 621 | Pfam | Cyclic nucleotide-binding domain | 401 | 500 | IPR000595 | - | |
Cpe06g00368 | 621 | PANTHER | POTASSIUM CHANNEL AKT1 | 1 | 614 | IPR045319 | GO:0005249|GO:0006813 | |
Cpe06g00368 | 621 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 381 | 516 | IPR000595 | - | |
Cpe06g00368 | 621 | PANTHER | POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED | 1 | 614 | - | - | |
Cpe06g00368 | 621 | CDD | CAP_ED | 381 | 509 | IPR000595 | - | |
Cpe06g00368 | 621 | PRINTS | EAG/ELK/ERG potassium channel family signature | 74 | 81 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe06g00368 | 621 | PRINTS | EAG/ELK/ERG potassium channel family signature | 277 | 288 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe06g00368 | 621 | PRINTS | EAG/ELK/ERG potassium channel family signature | 108 | 117 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe06g00368 | 621 | PRINTS | EAG/ELK/ERG potassium channel family signature | 295 | 304 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe06g00368 | 621 | PRINTS | EAG/ELK/ERG potassium channel family signature | 251 | 268 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe06g00368 | 621 | PRINTS | EAG/ELK/ERG potassium channel family signature | 97 | 107 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cpe06g00368 | 621 | Gene3D | - | 63 | 305 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe06g00368 | Cpe-Chr6:2067318 | Cpe18g00465 | Cpe-Chr18:5605324 | 1.01E-166 | dispersed | |
Cpe02g00423 | Cpe-Chr2:2340360 | Cpe06g00368 | Cpe-Chr6:2067318 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe06g00368 | K21867 | - | csv:101215177 | 1060.83 |