Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00399 ATGGCTCCTAGATTGGGGTTTCTGTGTCGGTGGGGAAAAGAGAAAGATCCTCAAAAAGGAACTCCGGTTGTTGTGACGATGGAGAAGCCTAACTTCTCCGTCGTGGAGATCGACGGTCCCGACGCCGCATTCCGGCCGGTGGAGAAAAGTAGAGGCAAAAATACCAAGCAGGTCACGTGGATTCTTCTTCTAAAGGCCAATCGAGCCGTCGGTTGCATAGCTTGGCTTGTTACAGTTCTCTGGACATTGTTGGGAACAATCAAGAAGAGGCTGATCTACCGGCAAGGAATCGCCATTGAAGGCGGGAAGCTGGGAAGAGGGAGGTTACTGTTTGGAGTTATTAGAGTTTTCTTAGTAACTTCCATTGGGATTCTTGCTTTTGAAATGCTTGCTTATTTCAAAGGCTGGCATTATTTTCAGCATTCTAATCTGCATATTCCTCAGGCTTCTGAGTTGCAAGGATTGCTTCATTCACTCTATGTTGCTTGGTTAACTTGTAGAGCAGAGTACATTGCTCCTCTCATTCAAACACTCTCTAAATTTTGCATCGTTCTGTTCCTTATCCAATCGGTGGATCGTATGATCCTTTGTTTTGGTTGCCTATGGATAAAGTACAAGAGAATTGAACCCAAGATTGAAGGGGATCCCTTCAGGTCGGATGATGTGGAGGGAGGTGGATACAAGTATCCAATGGTTCTTGTTCAAATTCCCATGTGCAACGAACGGGAGGTTTACGAGCAGTCTATCTCTGCAGTCTGTCAGATTGATTGGCCAAGGGACCATTTACTCATTCAAGTTCTTGATGATTCTGATGATGAGAGCATCCAACTGTTAATTAAGGCTGAGGTTGCTAAATGGAGCCATAAGGGGGTGAACATAGTCTATCGCCATCGATTAGTAAGAACGGGATATAAAGCTGGGAATTTGAAATCTGCAATGAGTTGTGATTATGTTAGAGACTATGAGTTTGTTGCAATTTTCGACGCCGACTTTCAACCTAACCCGGATTTTCTTAAGCTGACCGTCCCCCATTTCAAGGATAACCCAGAGCTAGGTTTGGTCCAGGCCAGATGGTCGTTTGTGAACCGGGACGAAAACTTGTTGACACGCCTTCAAAACATTAACTTGTGTTTCCACTTTGAGGTAGAACAGCAGGTCAATGGGGTGTTCCTTAATTTCTTTGGTTTCAATGGCACAGCTGGTGTTTGGAGGATTAAGGCGCTCGAGGAGTCCGGAGGGTGGCTTGAAAGAACGACAGTAGAGGATATGGACATAGCTGTGAGAGCCCATCTTAACGGCTGGAAATTCGTATTTCTAAACGACGTTAAGGTCCTTTGTGAAGTTCCTGAGTCCTATGAAGCTTATAGGAAGCAGCAACATCGTTGGCATTCTGGTCCTATGCAACTATTCAGGTTGTCCCTTCCAGCAGTCATAAGTTCTAAGATATCAGCATGGAAGAAGGCAAATTTGATACTATTGTTCTTTCTATTAAGGAAGCTTATCCTTCCATTCTATTCCTTCACGTTGTTCTGCATAATTCTTCCTCTAACCATGTTCGTACCAGAAGCCGAGCTTCCTGTATGGGTGATCTGTTACGTGCCCGTCTTCATGTCGTTACTCAACATTCTTCCATCCCCCAAATCATTTCCTTTTATTGTCCCCTACCTTCTTTTTGAAAACACCATGTCCGTAACCAAATTCAATGCCATGGTGTCTGGCTTATTCCAGTTAGGTAGCTCTTATGAGTGGATTGTGACTAAAAAGGCTGGCAGATCCTCCGAATCCGACTTACTGGCTGCTGCCGAAAGGGACTCTAAGATAACGAATCAAGCGCAGATATATAGAGGCGCTTCTGAGAGCGAGATTTCTGAGTTGACCCACTTAAAAGAACGCAAAGAAGTCGTCTCTGCACCTGTCAAAAAAGTAAACAAGTTATATCGAAAAGAGCTAGCGCTCGCGTTTCTTTTACTCTTAGCCTCACTCAGGAGTCTCTTGGCTGCACAAGGAGTCCACTTCTACTTCTTGATGTTCCAAGGTGTGACCTTCCTCCTTGTAGGTCTTGATCTAATTGGAGAGCAAATGAGCTGA 2088 44.59 MAPRLGFLCRWGKEKDPQKGTPVVVTMEKPNFSVVEIDGPDAAFRPVEKSRGKNTKQVTWILLLKANRAVGCIAWLVTVLWTLLGTIKKRLIYRQGIAIEGGKLGRGRLLFGVIRVFLVTSIGILAFEMLAYFKGWHYFQHSNLHIPQASELQGLLHSLYVAWLTCRAEYIAPLIQTLSKFCIVLFLIQSVDRMILCFGCLWIKYKRIEPKIEGDPFRSDDVEGGGYKYPMVLVQIPMCNEREVYEQSISAVCQIDWPRDHLLIQVLDDSDDESIQLLIKAEVAKWSHKGVNIVYRHRLVRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKLTVPHFKDNPELGLVQARWSFVNRDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLSLPAVISSKISAWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYVPVFMSLLNILPSPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLAAAERDSKITNQAQIYRGASESEISELTHLKERKEVVSAPVKKVNKLYRKELALAFLLLLASLRSLLAAQGVHFYFLMFQGVTFLLVGLDLIGEQMS 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2254365 2258794 - Cp4.1LG06g04610.1 Cpe06g00399 471179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00399 695 PANTHER - 13 695 - -
Cpe06g00399 695 SUPERFAMILY Nucleotide-diphospho-sugar transferases 232 530 IPR029044 -
Cpe06g00399 695 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 225 449 IPR029044 -
Cpe06g00399 695 Pfam Glycosyl transferase family group 2 324 528 IPR001173 -
Cpe06g00399 695 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 13 695 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02362 Cpe-Chr1:19755635 Cpe06g00399 Cpe-Chr6:2254365 0 dispersed
Cpe06g00399 Cpe-Chr6:2254365 Cpe13g00918 Cpe-Chr13:7791640 0 dispersed
Cpe19g00450 Cpe-Chr19:3992568 Cpe06g00399 Cpe-Chr6:2254365 2.71E-44 dispersed
Cpe02g00395 Cpe-Chr2:2196292 Cpe06g00399 Cpe-Chr6:2254365 2.57E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00399 - - csv:101217415 1304.66