Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00409 ATGGATCCAAATTCGAAGAAGTCGAACAAAATCAGAGACATCGTAAGGCTTCACCAGATCCTGAAGAAATGGCGGAAGTTAGCGGACTCATCGAAAACGGCGAACAAAGCCTCCGGCACGGCGGCGGGATCGGGAGGCAAGAGCATAAAGTTTCTGAAACGAACGCTTTCCTCTGGCGGTGAAATCTCCGGCGGCGCCGTGCCGAAAGGCTATTTGGCGGTGAGTGTAGGAGAGGAGCAAAAGCGATTTGTTATACCGACGCAGTATTTAGGGCATCCGGCGTTCGAGATTCTGTTGAGAGAGGCGGAGGAGGAGTTCGGGTTTCAACAAACGGGGGTTTTGAGGCTTCCGTGTGAAGTAACGGTGTTTGAAAATGTGGTGAAATTGGTGGAGGAGAAGAAGAACGGGGATTTGTTAGGCGGAGAGGAGGTGTTGAGTTTCTGTTCCTTGGAAACGCTGCACATTACGACGTCGCATCGTCCGCAGAGTCCAATGTGCAGATAA 504 51.39 MDPNSKKSNKIRDIVRLHQILKKWRKLADSSKTANKASGTAAGSGGKSIKFLKRTLSSGGEISGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENVVKLVEEKKNGDLLGGEEVLSFCSLETLHITTSHRPQSPMCR 167
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 2329915 2330418 - Cp4.1LG06g04420.1 Cpe06g00409 471189
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00409 167 Pfam Auxin responsive protein 25 129 IPR003676 GO:0009733
Cpe06g00409 167 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 167 IPR003676 GO:0009733
Cpe06g00409 167 PANTHER SAUR FAMILY PROTEIN 7 167 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01672 Cpe-Chr1:10473645 Cpe06g00409 Cpe-Chr6:2329915 1.63E-24 dispersed
Cpe05g01300 Cpe-Chr5:9073617 Cpe06g00409 Cpe-Chr6:2329915 3.80E-25 dispersed
Cpe06g00077 Cpe-Chr6:385010 Cpe06g00409 Cpe-Chr6:2329915 7.81E-23 dispersed
Cpe06g00409 Cpe-Chr6:2329915 Cpe17g01036 Cpe-Chr17:7850204 8.77E-20 dispersed
Cpe20g00295 Cpe-Chr20:1656088 Cpe06g00409 Cpe-Chr6:2329915 5.52E-18 dispersed
Cpe15g00893 Cpe-Chr15:8603631 Cpe06g00409 Cpe-Chr6:2329915 1.44E-21 transposed
Cpe04g00619 Cpe-Chr4:6412373 Cpe06g00409 Cpe-Chr6:2329915 3.35E-10 transposed
Cpe02g00389 Cpe-Chr2:2156077 Cpe06g00409 Cpe-Chr6:2329915 2.79E-100 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00409 K14488 - csv:101216710 261.536