Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe06g00409 | ATGGATCCAAATTCGAAGAAGTCGAACAAAATCAGAGACATCGTAAGGCTTCACCAGATCCTGAAGAAATGGCGGAAGTTAGCGGACTCATCGAAAACGGCGAACAAAGCCTCCGGCACGGCGGCGGGATCGGGAGGCAAGAGCATAAAGTTTCTGAAACGAACGCTTTCCTCTGGCGGTGAAATCTCCGGCGGCGCCGTGCCGAAAGGCTATTTGGCGGTGAGTGTAGGAGAGGAGCAAAAGCGATTTGTTATACCGACGCAGTATTTAGGGCATCCGGCGTTCGAGATTCTGTTGAGAGAGGCGGAGGAGGAGTTCGGGTTTCAACAAACGGGGGTTTTGAGGCTTCCGTGTGAAGTAACGGTGTTTGAAAATGTGGTGAAATTGGTGGAGGAGAAGAAGAACGGGGATTTGTTAGGCGGAGAGGAGGTGTTGAGTTTCTGTTCCTTGGAAACGCTGCACATTACGACGTCGCATCGTCCGCAGAGTCCAATGTGCAGATAA | 504 | 51.39 | MDPNSKKSNKIRDIVRLHQILKKWRKLADSSKTANKASGTAAGSGGKSIKFLKRTLSSGGEISGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENVVKLVEEKKNGDLLGGEEVLSFCSLETLHITTSHRPQSPMCR | 167 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 2329915 | 2330418 | - | Cp4.1LG06g04420.1 | Cpe06g00409 | 471189 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe06g00409 | 167 | Pfam | Auxin responsive protein | 25 | 129 | IPR003676 | GO:0009733 | |
| Cpe06g00409 | 167 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 7 | 167 | IPR003676 | GO:0009733 | |
| Cpe06g00409 | 167 | PANTHER | SAUR FAMILY PROTEIN | 7 | 167 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g01672 | Cpe-Chr1:10473645 | Cpe06g00409 | Cpe-Chr6:2329915 | 1.63E-24 | dispersed | |
| Cpe05g01300 | Cpe-Chr5:9073617 | Cpe06g00409 | Cpe-Chr6:2329915 | 3.80E-25 | dispersed | |
| Cpe06g00077 | Cpe-Chr6:385010 | Cpe06g00409 | Cpe-Chr6:2329915 | 7.81E-23 | dispersed | |
| Cpe06g00409 | Cpe-Chr6:2329915 | Cpe17g01036 | Cpe-Chr17:7850204 | 8.77E-20 | dispersed | |
| Cpe20g00295 | Cpe-Chr20:1656088 | Cpe06g00409 | Cpe-Chr6:2329915 | 5.52E-18 | dispersed | |
| Cpe15g00893 | Cpe-Chr15:8603631 | Cpe06g00409 | Cpe-Chr6:2329915 | 1.44E-21 | transposed | |
| Cpe04g00619 | Cpe-Chr4:6412373 | Cpe06g00409 | Cpe-Chr6:2329915 | 3.35E-10 | transposed | |
| Cpe02g00389 | Cpe-Chr2:2156077 | Cpe06g00409 | Cpe-Chr6:2329915 | 2.79E-100 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe06g00409 | K14488 | - | csv:101216710 | 261.536 |