Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00453 ATGTTCCCAAAGCCCCACCACCAACCACCGTCCCATTCTCATCCCTTTCCTCGCTCCTTCCCCGTCGCCGCAACTCCGCCGCCGCGCGGTTCTCCCTCCGCCGTCGATGAGGCTTCCGCGGCCGGCCCTTCGCCTCTCACTCACGCCATGTTCCCCAAAGAATCGGCATCCGCCGGCGACGGAGCTTCCATAGAAGTCGTCCGCCGCCCCCGAGGTCGTCCGCCGGGGTCCAAAAACAAGCCGAAGCCGGCGGCCGTTGTCGTCGCCGGCCGCGACGCTGAGCCGGCGATGAGTCCTTATGTACTTGAAGTTCCCGGTGGTAGCGATATTGTCGAGGCTGTTGCCCGATATTGCCGCCGCCGAAACACAGGGCTTTGTGTTCTCAACGCTTATGGAAACATCGCTGACGTCACTCTCCGGCAGCCGCCTTCGTCTCCTGTGGCGACCGTCACTTTCCGTGGACGATTCGATATCCTTTCCGTCTGCGCTACTTTCGTTCCTCAAACGACGTCGTTTCCTATACCTAACGGATTCACCATCACGCTAGCGGGACCACAGGGCCAGATCTTCGGCGGCTTGGTCGCCGGATCTTTAATCAGCGCCGGAACCGTCTATGTAATCGCCGCCTCATTCAACAATCCGTCGTATCAGCGGCTGCCATCGGAGGACGAGGTCAAGAAATTAACCTTCAGCGACGTGGAAGAAGACCACTCTCCGATCTCCGGCAACAAAGACAGCGAAAGCACCGCCGCTACCGAAACCTGCGGTCTTCTCCCGATGTACAGCACTCACTCATCATCGGACGTAATATGGACGCCGGCCGCCAGACAAGCGGGTCCGCCGCACCACCGCCAGTACTAA 861 60.16 MFPKPHHQPPSHSHPFPRSFPVAATPPPRGSPSAVDEASAAGPSPLTHAMFPKESASAGDGASIEVVRRPRGRPPGSKNKPKPAAVVVAGRDAEPAMSPYVLEVPGGSDIVEAVARYCRRRNTGLCVLNAYGNIADVTLRQPPSSPVATVTFRGRFDILSVCATFVPQTTSFPIPNGFTITLAGPQGQIFGGLVAGSLISAGTVYVIAASFNNPSYQRLPSEDEVKKLTFSDVEEDHSPISGNKDSESTAATETCGLLPMYSTHSSSDVIWTPAARQAGPPHHRQY 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2640759 2641619 - Cp4.1LG06g04000.1 Cpe06g00453 471233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00453 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 281 IPR014476 GO:0003680
Cpe06g00453 286 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 213 IPR005175 -
Cpe06g00453 286 MobiDBLite consensus disorder prediction 1 85 - -
Cpe06g00453 286 ProSiteProfiles PPC domain profile profile. 94 234 IPR005175 -
Cpe06g00453 286 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 223 - -
Cpe06g00453 286 MobiDBLite consensus disorder prediction 1 28 - -
Cpe06g00453 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 10 281 - -
Cpe06g00453 286 MobiDBLite consensus disorder prediction 231 250 - -
Cpe06g00453 286 CDD DUF296 99 211 IPR005175 -
Cpe06g00453 286 Gene3D - 98 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00453 Cpe-Chr6:2640759 Cpe11g00483 Cpe-Chr11:2791560 2.86E-86 dispersed
Cpe02g00342 Cpe-Chr2:1843698 Cpe06g00453 Cpe-Chr6:2640759 9.96E-172 wgd
Cpe06g00453 Cpe-Chr6:2640759 Cpe07g00165 Cpe-Chr7:981737 1.80E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00453 - - zju:107421268 301.982